{"id":"https://openalex.org/W3021181736","doi":"https://doi.org/10.1007/978-3-030-45385-5_48","title":"Micro-Variations from RNA-seq Experiments for Non-model Organisms","display_name":"Micro-Variations from RNA-seq Experiments for Non-model Organisms","publication_year":2020,"publication_date":"2020-01-01","ids":{"openalex":"https://openalex.org/W3021181736","doi":"https://doi.org/10.1007/978-3-030-45385-5_48","mag":"3021181736"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-45385-5_48","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-45385-5_48","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019987311","display_name":"Elena Espinosa","orcid":"https://orcid.org/0000-0001-7472-1191"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Elena Espinosa","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027943764","display_name":"Macarena Arroyo Varela","orcid":"https://orcid.org/0000-0003-4939-9174"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210108548","display_name":"Hospital Regional Universitario de M\u00e1laga","ror":"https://ror.org/01mqsmm97","country_code":"ES","type":"healthcare","lineage":["https://openalex.org/I4210108548"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Macarena Arroyo","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain","Unidad de Gesti\u00f3n Cl\u00ednica de Enfermedades Respiratorias, Hospital Regional Universitario de M\u00e1laga, Avda Carlos Haya s/n, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Unidad de Gesti\u00f3n Cl\u00ednica de Enfermedades Respiratorias, Hospital Regional Universitario de M\u00e1laga, Avda Carlos Haya s/n, Malaga, Spain","institution_ids":["https://openalex.org/I4210108548"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085292635","display_name":"Rafael Larrosa Jim\u00e9nez","orcid":"https://orcid.org/0000-0002-4166-3041"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Rafael Larrosa","raw_affiliation_strings":["Departamento de Arquitectura de Computadores, Universidad de M\u00e1laga, 29071, Malaga, Spain","Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Departamento de Arquitectura de Computadores, Universidad de M\u00e1laga, 29071, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062765341","display_name":"Manuel Manchado","orcid":"https://orcid.org/0000-0002-4584-4878"},"institutions":[{"id":"https://openalex.org/I4210117122","display_name":"Consejer\u00eda de Agricultura, Pesca, Agua y Desarrollo Rural","ror":"https://ror.org/0269h3m05","country_code":"ES","type":"government","lineage":["https://openalex.org/I4210117122","https://openalex.org/I918821925"]},{"id":"https://openalex.org/I4210129002","display_name":"Andalusian Institute of Agricultural and Fisheries Research and Training","ror":"https://ror.org/02w21g732","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210129002","https://openalex.org/I918821925"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Manuel Manchado","raw_affiliation_strings":["IFAPA Centro El Toru\u00f1o, Consejer\u00eda de Agricultura y Pesca, 11500, El Puerto de Santa Mar\u00eda, Cadiz, Spain"],"affiliations":[{"raw_affiliation_string":"IFAPA Centro El Toru\u00f1o, Consejer\u00eda de Agricultura y Pesca, 11500, El Puerto de Santa Mar\u00eda, Cadiz, Spain","institution_ids":["https://openalex.org/I4210117122","https://openalex.org/I4210129002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056017872","display_name":"M. Gonzalo Claros","orcid":"https://orcid.org/0000-0002-0112-3550"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Gonzalo Claros","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain","Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, Universidad de M\u00e1laga, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]},{"raw_affiliation_string":"Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074979435","display_name":"Roc\u00ed\u00ado Bautista","orcid":"https://orcid.org/0000-0003-1685-8119"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Roc\u00ed\u00ado Bautista","raw_affiliation_strings":["Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Plataforma Andaluza de Bioinform\u00e1tica, Universidad de M\u00e1laga, 29590, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5019987311"],"corresponding_institution_ids":["https://openalex.org/I82767444"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.3936,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.58482065,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"542","last_page":"549"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.7242701649665833},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.6535366177558899},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.6373528838157654},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5894516706466675},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5432769656181335},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5364371538162231},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5006551742553711},{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.4901147782802582},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.47132590413093567},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4494818449020386},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.43445730209350586},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.42945927381515503},{"id":"https://openalex.org/keywords/exome","display_name":"Exome","score":0.4224613606929779},{"id":"https://openalex.org/keywords/exome-sequencing","display_name":"Exome sequencing","score":0.4099670946598053},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.38303035497665405},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.31611791253089905},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17239555716514587},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.14562982320785522},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1075575053691864}],"concepts":[{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.7242701649665833},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.6535366177558899},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.6373528838157654},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5894516706466675},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5432769656181335},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5364371538162231},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5006551742553711},{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.4901147782802582},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.47132590413093567},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4494818449020386},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.43445730209350586},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.42945927381515503},{"id":"https://openalex.org/C10590036","wikidata":"https://www.wikidata.org/wiki/Q417664","display_name":"Exome","level":5,"score":0.4224613606929779},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.4099670946598053},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.38303035497665405},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.31611791253089905},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17239555716514587},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.14562982320785522},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1075575053691864},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-45385-5_48","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-45385-5_48","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5,"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W1987545661","https://openalex.org/W2023171799","https://openalex.org/W2127059936","https://openalex.org/W2155943701","https://openalex.org/W2168133698","https://openalex.org/W2169456326","https://openalex.org/W2225287204","https://openalex.org/W2417483443","https://openalex.org/W2613065646","https://openalex.org/W2741195344","https://openalex.org/W2793961932","https://openalex.org/W2943457526","https://openalex.org/W2949933537","https://openalex.org/W2962658116","https://openalex.org/W2972404025","https://openalex.org/W2990871782","https://openalex.org/W2994748148"],"related_works":["https://openalex.org/W2160515792","https://openalex.org/W2156272823","https://openalex.org/W2553356891","https://openalex.org/W2043864615","https://openalex.org/W2015579947","https://openalex.org/W2754643976","https://openalex.org/W2951648583","https://openalex.org/W2584868213","https://openalex.org/W4323313960","https://openalex.org/W2066435382"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
