{"id":"https://openalex.org/W2992220699","doi":"https://doi.org/10.1007/978-3-030-36592-9_21","title":"High-Performance Hybrid Computing for Bioinformatic Analysis of Protein Superfamilies","display_name":"High-Performance Hybrid Computing for Bioinformatic Analysis of Protein Superfamilies","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2992220699","doi":"https://doi.org/10.1007/978-3-030-36592-9_21","mag":"2992220699"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-36592-9_21","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-36592-9_21","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028479633","display_name":"Dmitry Suplatov","orcid":"https://orcid.org/0000-0002-7054-3487"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Dmitry Suplatov","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032100669","display_name":"Yana Sharapova","orcid":"https://orcid.org/0000-0003-1250-6570"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Yana Sharapova","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109443479","display_name":"Maxim Shegay","orcid":null},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Maxim Shegay","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005607792","display_name":"\u041d. \u041d. \u041f\u043e\u043f\u043e\u0432\u0430","orcid":"https://orcid.org/0000-0002-3339-1365"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Nina Popova","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110238730","display_name":"Kateryna Fesko","orcid":null},"institutions":[{"id":"https://openalex.org/I4092182","display_name":"Graz University of Technology","ror":"https://ror.org/00d7xrm67","country_code":"AT","type":"education","lineage":["https://openalex.org/I4092182"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Kateryna Fesko","raw_affiliation_strings":["Institute of Organic Chemistry, Graz University of Technology, Graz, Austria"],"affiliations":[{"raw_affiliation_string":"Institute of Organic Chemistry, Graz University of Technology, Graz, Austria","institution_ids":["https://openalex.org/I4092182"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044421524","display_name":"Vladimir Voevodin","orcid":"https://orcid.org/0000-0001-6036-5106"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]},{"id":"https://openalex.org/I4210159227","display_name":"Institute of Mathematical Problems of Biology","ror":"https://ror.org/04xtpdj18","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210124601","https://openalex.org/I4210159227"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vladimir Voevodin","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia","Research Computing Center, Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]},{"raw_affiliation_string":"Research Computing Center, Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235","https://openalex.org/I4210159227"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033744508","display_name":"Vytas K. \u0160vedas","orcid":"https://orcid.org/0000-0002-1664-0307"},"institutions":[{"id":"https://openalex.org/I19880235","display_name":"Lomonosov Moscow State University","ror":"https://ror.org/010pmpe69","country_code":"RU","type":"education","lineage":["https://openalex.org/I19880235"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vytas \u0160vedas","raw_affiliation_strings":["Lomonosov Moscow State University, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Lomonosov Moscow State University, Moscow, Russia","institution_ids":["https://openalex.org/I19880235"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5028479633"],"corresponding_institution_ids":["https://openalex.org/I19880235"],"apc_list":null,"apc_paid":null,"fwci":0.3234,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.63970899,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":93},"biblio":{"volume":null,"issue":null,"first_page":"249","last_page":"264"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10602","display_name":"Glycosylation and Glycoproteins Research","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.7624850273132324},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7253836989402771},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.570360541343689},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5629842877388},{"id":"https://openalex.org/keywords/structural-bioinformatics","display_name":"Structural bioinformatics","score":0.5459697246551514},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.4982178211212158},{"id":"https://openalex.org/keywords/superfamily","display_name":"SUPERFAMILY","score":0.4804803431034088},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4693383276462555},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4667990803718567},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4451783001422882},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.4358757436275482},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4332195818424225},{"id":"https://openalex.org/keywords/protein-superfamily","display_name":"Protein superfamily","score":0.41516581177711487},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.29587048292160034},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2227153480052948},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.14600151777267456},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1001451313495636},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09869608283042908},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.07626965641975403}],"concepts":[{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.7624850273132324},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7253836989402771},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.570360541343689},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5629842877388},{"id":"https://openalex.org/C69131567","wikidata":"https://www.wikidata.org/wiki/Q2068215","display_name":"Structural bioinformatics","level":3,"score":0.5459697246551514},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.4982178211212158},{"id":"https://openalex.org/C92028520","wikidata":"https://www.wikidata.org/wiki/Q7395025","display_name":"SUPERFAMILY","level":3,"score":0.4804803431034088},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4693383276462555},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4667990803718567},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4451783001422882},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.4358757436275482},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4332195818424225},{"id":"https://openalex.org/C178180057","wikidata":"https://www.wikidata.org/wiki/Q7251477","display_name":"Protein superfamily","level":3,"score":0.41516581177711487},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.29587048292160034},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2227153480052948},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.14600151777267456},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1001451313495636},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09869608283042908},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.07626965641975403},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-36592-9_21","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-36592-9_21","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":69,"referenced_works":["https://openalex.org/W97002856","https://openalex.org/W172569458","https://openalex.org/W1967538863","https://openalex.org/W1996431131","https://openalex.org/W2003053600","https://openalex.org/W2004822259","https://openalex.org/W2072207870","https://openalex.org/W2073373061","https://openalex.org/W2082667898","https://openalex.org/W2086824985","https://openalex.org/W2096041635","https://openalex.org/W2104437034","https://openalex.org/W2118402755","https://openalex.org/W2130060890","https://openalex.org/W2139119119","https://openalex.org/W2144998676","https://openalex.org/W2146390839","https://openalex.org/W2152961200","https://openalex.org/W2154792548","https://openalex.org/W2156563976","https://openalex.org/W2156909290","https://openalex.org/W2158020463","https://openalex.org/W2160378127","https://openalex.org/W2161699625","https://openalex.org/W2162800127","https://openalex.org/W2168239566","https://openalex.org/W2168340825","https://openalex.org/W2170574884","https://openalex.org/W2170747616","https://openalex.org/W2263196200","https://openalex.org/W2294028555","https://openalex.org/W2313116527","https://openalex.org/W2318004931","https://openalex.org/W2343810808","https://openalex.org/W2466930524","https://openalex.org/W2474613199","https://openalex.org/W2504887022","https://openalex.org/W2517870849","https://openalex.org/W2518295168","https://openalex.org/W2540434174","https://openalex.org/W2559919086","https://openalex.org/W2620998958","https://openalex.org/W2736778032","https://openalex.org/W2737403359","https://openalex.org/W2754773169","https://openalex.org/W2765696925","https://openalex.org/W2770183732","https://openalex.org/W2776264363","https://openalex.org/W2778886497","https://openalex.org/W2789380007","https://openalex.org/W2793974828","https://openalex.org/W2800556297","https://openalex.org/W2801816600","https://openalex.org/W2802693280","https://openalex.org/W2802717482","https://openalex.org/W2804040157","https://openalex.org/W2808542295","https://openalex.org/W2888835191","https://openalex.org/W2898434063","https://openalex.org/W2901040450","https://openalex.org/W2907157553","https://openalex.org/W2927518284","https://openalex.org/W2946281764","https://openalex.org/W3132233829","https://openalex.org/W3136918052","https://openalex.org/W4240118418","https://openalex.org/W4245305443","https://openalex.org/W4255261354","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2120852229","https://openalex.org/W2009133913","https://openalex.org/W2015399150","https://openalex.org/W2061567716","https://openalex.org/W2275032899","https://openalex.org/W2498689255","https://openalex.org/W2032757954","https://openalex.org/W2075451741","https://openalex.org/W2505756865","https://openalex.org/W2113852734"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
