{"id":"https://openalex.org/W2966666009","doi":"https://doi.org/10.1007/978-3-030-26807-7_4","title":"A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models","display_name":"A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2966666009","doi":"https://doi.org/10.1007/978-3-030-26807-7_4","mag":"2966666009"},"language":"en","primary_location":{"id":"pmh:oai:pure.atira.dk:publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Singh , A , Wiuf , C , Behera , A & Gopalkrishnan , M 2019 , A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models . in Y Liu & C Thachuk (eds) , DNA Computing and Molecular Programming - 25th International Conference, DNA 25, Proceedings . Springer , Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) , vol. 11648 LNCS , pp. 54-79 , 25th International Conference on DNA Computing and Molecular Programming, DNA 2019 , Seattle , United States , 05/08/2019 . https://doi.org/10.1007/978-3-030-26807-7_4","raw_type":"contributionToPeriodical"},"type":"book-chapter","indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://researchprofiles.ku.dk/da/publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038586780","display_name":"Vijay Kumar","orcid":"https://orcid.org/0000-0003-0170-757X"},"institutions":[{"id":"https://openalex.org/I4210156819","display_name":"Center for Excellence in Basic Sciences","ror":"https://ror.org/057wkj006","country_code":"IN","type":"education","lineage":["https://openalex.org/I169877490","https://openalex.org/I2799351866","https://openalex.org/I3149292468","https://openalex.org/I4210156819"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Singh, Abhinav","raw_affiliation_strings":["UM-DAE Centre for Excellence in Basic Sciences, Mumbai, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UM-DAE Centre for Excellence in Basic Sciences, Mumbai, India","institution_ids":["https://openalex.org/I4210156819"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065384282","display_name":"Carsten Wiuf","orcid":"https://orcid.org/0000-0002-1302-4445"},"institutions":[{"id":"https://openalex.org/I124055696","display_name":"University of Copenhagen","ror":"https://ror.org/035b05819","country_code":"DK","type":"education","lineage":["https://openalex.org/I124055696"]}],"countries":["DK"],"is_corresponding":false,"raw_author_name":"Wiuf, Carsten","raw_affiliation_strings":["Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematical Sciences, University of Copenhagen, Copenhagen, Denmark","institution_ids":["https://openalex.org/I124055696"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007429492","display_name":"Abhishek Behera","orcid":null},"institutions":[{"id":"https://openalex.org/I162827531","display_name":"Indian Institute of Technology Bombay","ror":"https://ror.org/02qyf5152","country_code":"IN","type":"education","lineage":["https://openalex.org/I162827531"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Behera, Abhishek","raw_affiliation_strings":["Indian Institute of Technology Bombay, Mumbai, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Institute of Technology Bombay, Mumbai, India","institution_ids":["https://openalex.org/I162827531"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014099796","display_name":"Manoj Gopalkrishnan","orcid":null},"institutions":[{"id":"https://openalex.org/I162827531","display_name":"Indian Institute of Technology Bombay","ror":"https://ror.org/02qyf5152","country_code":"IN","type":"education","lineage":["https://openalex.org/I162827531"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Gopalkrishnan, Manoj","raw_affiliation_strings":["Indian Institute of Technology Bombay, Mumbai, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Institute of Technology Bombay, Mumbai, India","institution_ids":["https://openalex.org/I162827531"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5038586780"],"corresponding_institution_ids":["https://openalex.org/I4210156819"],"apc_list":null,"apc_paid":null,"fwci":0.1709,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.5281138,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7303826808929443},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.7055308818817139},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.6086567640304565},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.528672456741333},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5233708620071411},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5014297962188721},{"id":"https://openalex.org/keywords/fixed-point","display_name":"Fixed point","score":0.5002825260162354},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.48764288425445557},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.48658764362335205},{"id":"https://openalex.org/keywords/markov-model","display_name":"Markov model","score":0.4166925549507141},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3616167902946472},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2107338011264801},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.16795676946640015}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7303826808929443},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.7055308818817139},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.6086567640304565},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.528672456741333},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5233708620071411},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5014297962188721},{"id":"https://openalex.org/C61445026","wikidata":"https://www.wikidata.org/wiki/Q217608","display_name":"Fixed point","level":2,"score":0.5002825260162354},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.48764288425445557},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.48658764362335205},{"id":"https://openalex.org/C163836022","wikidata":"https://www.wikidata.org/wiki/Q6771326","display_name":"Markov model","level":3,"score":0.4166925549507141},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3616167902946472},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2107338011264801},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.16795676946640015},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"pmh:oai:pure.atira.dk:publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Singh , A , Wiuf , C , Behera , A & Gopalkrishnan , M 2019 , A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models . in Y Liu & C Thachuk (eds) , DNA Computing and Molecular Programming - 25th International Conference, DNA 25, Proceedings . Springer , Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) , vol. 11648 LNCS , pp. 54-79 , 25th International Conference on DNA Computing and Molecular Programming, DNA 2019 , Seattle , United States , 05/08/2019 . https://doi.org/10.1007/978-3-030-26807-7_4","raw_type":"contributionToPeriodical"}],"best_oa_location":{"id":"pmh:oai:pure.atira.dk:publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","is_oa":true,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/aaad50d2-a8f8-4dcc-9d22-7dc42bb17849","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Singh , A , Wiuf , C , Behera , A & Gopalkrishnan , M 2019 , A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models . in Y Liu & C Thachuk (eds) , DNA Computing and Molecular Programming - 25th International Conference, DNA 25, Proceedings . Springer , Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) , vol. 11648 LNCS , pp. 54-79 , 25th International Conference on DNA Computing and Molecular Programming, DNA 2019 , Seattle , United States , 05/08/2019 . https://doi.org/10.1007/978-3-030-26807-7_4","raw_type":"contributionToPeriodical"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":50,"referenced_works":["https://openalex.org/W1146839044","https://openalex.org/W1556911442","https://openalex.org/W1842664382","https://openalex.org/W1986292487","https://openalex.org/W1990476699","https://openalex.org/W1991095994","https://openalex.org/W1991159148","https://openalex.org/W1996197315","https://openalex.org/W2000804241","https://openalex.org/W2003333103","https://openalex.org/W2007483105","https://openalex.org/W2008591003","https://openalex.org/W2025569385","https://openalex.org/W2027838042","https://openalex.org/W2032558547","https://openalex.org/W2036548061","https://openalex.org/W2047231556","https://openalex.org/W2050689535","https://openalex.org/W2054233487","https://openalex.org/W2068601134","https://openalex.org/W2075031385","https://openalex.org/W2078910282","https://openalex.org/W2099111195","https://openalex.org/W2103139809","https://openalex.org/W2110156410","https://openalex.org/W2111843456","https://openalex.org/W2115354930","https://openalex.org/W2117853077","https://openalex.org/W2125838338","https://openalex.org/W2133035852","https://openalex.org/W2158313010","https://openalex.org/W2163730983","https://openalex.org/W2166918926","https://openalex.org/W2167148127","https://openalex.org/W2186876778","https://openalex.org/W2251260883","https://openalex.org/W2340334270","https://openalex.org/W2485135680","https://openalex.org/W2606425577","https://openalex.org/W2737458193","https://openalex.org/W2747253451","https://openalex.org/W2779793261","https://openalex.org/W2810268565","https://openalex.org/W2952620388","https://openalex.org/W2962711171","https://openalex.org/W2962738471","https://openalex.org/W2964136553","https://openalex.org/W3098052815","https://openalex.org/W3101769334","https://openalex.org/W4252331534"],"related_works":["https://openalex.org/W1510894296","https://openalex.org/W2134386692","https://openalex.org/W2084326697","https://openalex.org/W2194396582","https://openalex.org/W2027903142","https://openalex.org/W2082284720","https://openalex.org/W2116722627","https://openalex.org/W2537260108","https://openalex.org/W2354322608","https://openalex.org/W2158700654"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-05-11T06:09:18.715088","created_date":"2025-10-10T00:00:00"}