{"id":"https://openalex.org/W2946712612","doi":"https://doi.org/10.1007/978-3-030-20242-2_2","title":"The Review of Bioinformatics Tool for 3D Plant Genomics Research","display_name":"The Review of Bioinformatics Tool for 3D Plant Genomics Research","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2946712612","doi":"https://doi.org/10.1007/978-3-030-20242-2_2","mag":"2946712612"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-20242-2_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-20242-2_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071404074","display_name":"Xiangyu Yang","orcid":"https://orcid.org/0000-0003-1081-3657"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiangyu Yang","raw_affiliation_strings":["College of Computer Science, Sichuan University, Chengdu, 610065, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Sichuan University, Chengdu, 610065, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106484553","display_name":"Zhenghao Li","orcid":"https://orcid.org/0009-0003-6889-2519"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenghao Li","raw_affiliation_strings":["College of Life Sciences, Sichuan University, Chengdu, 610065, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Sichuan University, Chengdu, 610065, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075437567","display_name":"Jingtian Zhao","orcid":null},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingtian Zhao","raw_affiliation_strings":["College of Computer Science, Sichuan University, Chengdu, 610065, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Sichuan University, Chengdu, 610065, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100654768","display_name":"Tao Ma","orcid":"https://orcid.org/0000-0002-7094-6868"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Ma","raw_affiliation_strings":["College of Life Sciences, Sichuan University, Chengdu, 610065, China"],"affiliations":[{"raw_affiliation_string":"College of Life Sciences, Sichuan University, Chengdu, 610065, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101423302","display_name":"Pengchao Li","orcid":"https://orcid.org/0000-0002-4200-139X"},"institutions":[{"id":"https://openalex.org/I142108993","display_name":"Southwest University","ror":"https://ror.org/01kj4z117","country_code":"CN","type":"education","lineage":["https://openalex.org/I142108993"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pengchao Li","raw_affiliation_strings":["School of Computer and Information Science, Southwest University, Beibei District, Chongqing, 400715, China"],"affiliations":[{"raw_affiliation_string":"School of Computer and Information Science, Southwest University, Beibei District, Chongqing, 400715, China","institution_ids":["https://openalex.org/I142108993"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100350625","display_name":"Le Zhang","orcid":"https://orcid.org/0000-0002-3708-1727"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Le Zhang","raw_affiliation_strings":["College of Computer Science, Sichuan University, Chengdu, 610065, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science, Sichuan University, Chengdu, 610065, China","institution_ids":["https://openalex.org/I24185976"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5071404074"],"corresponding_institution_ids":["https://openalex.org/I24185976"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08552576,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"16","last_page":"27"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.7110432982444763},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6627725958824158},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6169669032096863},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5590062737464905},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5445204377174377},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5429214835166931},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.4830625653266907},{"id":"https://openalex.org/keywords/structural-genomics","display_name":"Structural genomics","score":0.46479979157447815},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.45308107137680054},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.4450998604297638},{"id":"https://openalex.org/keywords/chromosome-conformation-capture","display_name":"Chromosome conformation capture","score":0.43630069494247437},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.33208805322647095},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3313218951225281},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.313707172870636},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.25118499994277954},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.21826162934303284},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17468881607055664},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.11159259080886841}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.7110432982444763},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6627725958824158},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6169669032096863},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5590062737464905},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5445204377174377},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5429214835166931},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.4830625653266907},{"id":"https://openalex.org/C192772702","wikidata":"https://www.wikidata.org/wiki/Q2583975","display_name":"Structural genomics","level":3,"score":0.46479979157447815},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.45308107137680054},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.4450998604297638},{"id":"https://openalex.org/C93946551","wikidata":"https://www.wikidata.org/wiki/Q5113914","display_name":"Chromosome conformation capture","level":5,"score":0.43630069494247437},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.33208805322647095},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3313218951225281},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.313707172870636},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.25118499994277954},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.21826162934303284},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17468881607055664},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.11159259080886841},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C111936080","wikidata":"https://www.wikidata.org/wiki/Q913367","display_name":"Enhancer","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-20242-2_2","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-20242-2_2","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W1841864539","https://openalex.org/W1862913282","https://openalex.org/W1872216280","https://openalex.org/W1915573037","https://openalex.org/W1973062929","https://openalex.org/W2013652801","https://openalex.org/W2014677321","https://openalex.org/W2070021921","https://openalex.org/W2090037139","https://openalex.org/W2097798909","https://openalex.org/W2114083195","https://openalex.org/W2118503070","https://openalex.org/W2123589780","https://openalex.org/W2124894542","https://openalex.org/W2126793961","https://openalex.org/W2131004167","https://openalex.org/W2131271579","https://openalex.org/W2134907628","https://openalex.org/W2142270559","https://openalex.org/W2145174846","https://openalex.org/W2152605077","https://openalex.org/W2163412235","https://openalex.org/W2169389191","https://openalex.org/W2185693210","https://openalex.org/W2227178360","https://openalex.org/W2310342073","https://openalex.org/W2344920712","https://openalex.org/W2396077153","https://openalex.org/W2397143686","https://openalex.org/W2474989629","https://openalex.org/W2481029670","https://openalex.org/W2493763501","https://openalex.org/W2528263447","https://openalex.org/W2577461749","https://openalex.org/W2606047496","https://openalex.org/W2610080502","https://openalex.org/W2610240247","https://openalex.org/W2616052794","https://openalex.org/W2625231465","https://openalex.org/W2738924259","https://openalex.org/W2745865732","https://openalex.org/W2747655851","https://openalex.org/W2758862582","https://openalex.org/W2765494761","https://openalex.org/W2768509963","https://openalex.org/W2770852695","https://openalex.org/W2777047301","https://openalex.org/W2790251212","https://openalex.org/W2800968671","https://openalex.org/W2803256172","https://openalex.org/W2804097979","https://openalex.org/W2884361791","https://openalex.org/W2885386724","https://openalex.org/W2891718993","https://openalex.org/W2902012935","https://openalex.org/W2951458958","https://openalex.org/W3102786052"],"related_works":["https://openalex.org/W2002288604","https://openalex.org/W2365466262","https://openalex.org/W3195254751","https://openalex.org/W3116849561","https://openalex.org/W1568513966","https://openalex.org/W2035381155","https://openalex.org/W2136004413","https://openalex.org/W2111997778","https://openalex.org/W2019972293","https://openalex.org/W2385787406"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
