{"id":"https://openalex.org/W2949033422","doi":"https://doi.org/10.1007/978-3-030-20081-7_23","title":"Graph-Based Representations for Supporting Genome Data Analysis and Visualization: Opportunities and Challenges","display_name":"Graph-Based Representations for Supporting Genome Data Analysis and Visualization: Opportunities and Challenges","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2949033422","doi":"https://doi.org/10.1007/978-3-030-20081-7_23","mag":"2949033422"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-20081-7_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-20081-7_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043110356","display_name":"Vincenzo Carletti","orcid":"https://orcid.org/0000-0002-9130-5533"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Vincenzo Carletti","raw_affiliation_strings":["DIEM, University of Salerno, Fisciano, Italy"],"affiliations":[{"raw_affiliation_string":"DIEM, University of Salerno, Fisciano, Italy","institution_ids":["https://openalex.org/I131729948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082731857","display_name":"Pasquale Foggia","orcid":"https://orcid.org/0000-0002-7096-1902"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pasquale Foggia","raw_affiliation_strings":["DIEM, University of Salerno, Fisciano, Italy","University of Salerno, Fisicano, Italy"],"affiliations":[{"raw_affiliation_string":"DIEM, University of Salerno, Fisciano, Italy","institution_ids":["https://openalex.org/I131729948"]},{"raw_affiliation_string":"University of Salerno, Fisicano, Italy","institution_ids":["https://openalex.org/I131729948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008992371","display_name":"Erik Garrison","orcid":"https://orcid.org/0000-0003-3821-631X"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Erik Garrison","raw_affiliation_strings":["Genomics Institute, University of California Santa Cruz, Santa Cruz, USA"],"affiliations":[{"raw_affiliation_string":"Genomics Institute, University of California Santa Cruz, Santa Cruz, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037160683","display_name":"Luca Greco","orcid":"https://orcid.org/0000-0003-0246-2842"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Luca Greco","raw_affiliation_strings":["DIEM, University of Salerno, Fisciano, Italy"],"affiliations":[{"raw_affiliation_string":"DIEM, University of Salerno, Fisciano, Italy","institution_ids":["https://openalex.org/I131729948"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009913927","display_name":"Pierluigi Ritrovato","orcid":"https://orcid.org/0000-0003-4534-6972"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Pierluigi Ritrovato","raw_affiliation_strings":["DIEM, University of Salerno, Fisciano, Italy"],"affiliations":[{"raw_affiliation_string":"DIEM, University of Salerno, Fisciano, Italy","institution_ids":["https://openalex.org/I131729948"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027593663","display_name":"Mario Vento","orcid":"https://orcid.org/0000-0002-2948-741X"},"institutions":[{"id":"https://openalex.org/I131729948","display_name":"University of Salerno","ror":"https://ror.org/0192m2k53","country_code":"IT","type":"education","lineage":["https://openalex.org/I131729948"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Mario Vento","raw_affiliation_strings":["DIEM, University of Salerno, Fisciano, Italy"],"affiliations":[{"raw_affiliation_string":"DIEM, University of Salerno, Fisciano, Italy","institution_ids":["https://openalex.org/I131729948"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5043110356"],"corresponding_institution_ids":["https://openalex.org/I131729948"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.6468,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.70036376,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"237","last_page":"246"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.991100013256073,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7520051002502441},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.5723698735237122},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5390080809593201},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5325366854667664},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5318818688392639},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4420756697654724},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3076396882534027},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16753274202346802},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.13351735472679138},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1291806399822235}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7520051002502441},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.5723698735237122},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5390080809593201},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5325366854667664},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5318818688392639},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4420756697654724},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3076396882534027},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16753274202346802},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.13351735472679138},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1291806399822235},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-20081-7_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-20081-7_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1813440684","https://openalex.org/W1984236772","https://openalex.org/W2001792012","https://openalex.org/W2037219729","https://openalex.org/W2090705041","https://openalex.org/W2114632843","https://openalex.org/W2129264270","https://openalex.org/W2136651963","https://openalex.org/W2144767153","https://openalex.org/W2156104322","https://openalex.org/W2160969485","https://openalex.org/W2469251889","https://openalex.org/W2474973645","https://openalex.org/W2603734366","https://openalex.org/W2759456806","https://openalex.org/W2776539412","https://openalex.org/W2797994607","https://openalex.org/W2952366981","https://openalex.org/W2952379406"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W3124914020","https://openalex.org/W2141033859","https://openalex.org/W2077542787","https://openalex.org/W2071701083","https://openalex.org/W2383687187","https://openalex.org/W2156434174","https://openalex.org/W2121496884","https://openalex.org/W2387910809","https://openalex.org/W2294221496"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
