{"id":"https://openalex.org/W2942620587","doi":"https://doi.org/10.1007/978-3-030-17938-0_16","title":"Qualitative Comparison of Selected Indel Detection Methods for RNA-Seq Data","display_name":"Qualitative Comparison of Selected Indel Detection Methods for RNA-Seq Data","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2942620587","doi":"https://doi.org/10.1007/978-3-030-17938-0_16","mag":"2942620587"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-17938-0_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17938-0_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068348276","display_name":"Tamara Slosarek","orcid":"https://orcid.org/0000-0003-1514-1706"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tamara Slosarek","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012668412","display_name":"Milena Kraus","orcid":"https://orcid.org/0000-0002-4472-0427"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Milena Kraus","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053012847","display_name":"Matthieu-P. Schapranow","orcid":"https://orcid.org/0000-0001-6601-2942"},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Matthieu-P. Schapranow","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5039002960","display_name":"Erwin Boettinger","orcid":null},"institutions":[{"id":"https://openalex.org/I143288331","display_name":"Hasso Plattner Institute","ror":"https://ror.org/058rn5r42","country_code":"DE","type":"facility","lineage":["https://openalex.org/I143288331","https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Erwin Boettinger","raw_affiliation_strings":["Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Digital Health Center, Hasso Plattner Institute, Rudolf-Breitscheid-Str. 187, 14482, Potsdam, Germany","institution_ids":["https://openalex.org/I143288331"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.3243,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.56490223,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"166","last_page":"177"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.9039818048477173},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6727595329284668},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.6318541169166565},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5278201699256897},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.519356369972229},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.4480578601360321},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4373735785484314},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39667195081710815},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3464769423007965},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.25938186049461365},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21105024218559265},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2070433795452118},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.09628060460090637}],"concepts":[{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.9039818048477173},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6727595329284668},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.6318541169166565},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5278201699256897},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.519356369972229},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.4480578601360321},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4373735785484314},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39667195081710815},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3464769423007965},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.25938186049461365},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21105024218559265},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2070433795452118},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.09628060460090637},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-17938-0_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17938-0_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.6499999761581421}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1993023683","https://openalex.org/W2036272952","https://openalex.org/W2054576015","https://openalex.org/W2060965924","https://openalex.org/W2076359272","https://openalex.org/W2096441981","https://openalex.org/W2102278945","https://openalex.org/W2136170412","https://openalex.org/W2150131459","https://openalex.org/W2150635649","https://openalex.org/W2231865019","https://openalex.org/W2259938310","https://openalex.org/W2491236485","https://openalex.org/W2566567183","https://openalex.org/W2575271283","https://openalex.org/W2580314844","https://openalex.org/W2770095154","https://openalex.org/W2791837701","https://openalex.org/W2792286521","https://openalex.org/W4255875171"],"related_works":["https://openalex.org/W2033001683","https://openalex.org/W2167094946","https://openalex.org/W2894284492","https://openalex.org/W4387460329","https://openalex.org/W2046457574","https://openalex.org/W1949458596","https://openalex.org/W3144677376","https://openalex.org/W32785519","https://openalex.org/W4382398022","https://openalex.org/W2160515792"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
