{"id":"https://openalex.org/W2951329745","doi":"https://doi.org/10.1007/978-3-030-17935-9_23","title":"Deciphering General Characteristics of Residues Constituting Allosteric Communication Paths","display_name":"Deciphering General Characteristics of Residues Constituting Allosteric Communication Paths","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2951329745","doi":"https://doi.org/10.1007/978-3-030-17935-9_23","mag":"2951329745"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-17935-9_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17935-9_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/1802.10207","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5025134890","display_name":"Girik Malik","orcid":"https://orcid.org/0000-0003-2755-8568"},"institutions":[{"id":"https://openalex.org/I1325736334","display_name":"Battelle","ror":"https://ror.org/01h5tnr73","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1325736334"]},{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Girik Malik","raw_affiliation_strings":["Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","Center for Perinatal Research, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","The Research Institute at Nationwide Children's Hospital"],"affiliations":[{"raw_affiliation_string":"Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232","https://openalex.org/I1325736334"]},{"raw_affiliation_string":"Center for Perinatal Research, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232"]},{"raw_affiliation_string":"The Research Institute at Nationwide Children's Hospital","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090022219","display_name":"Anirban Banerji","orcid":null},"institutions":[{"id":"https://openalex.org/I1325736334","display_name":"Battelle","ror":"https://ror.org/01h5tnr73","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1325736334"]},{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anirban Banerji","raw_affiliation_strings":["Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","The Research Institute at Nationwide Children's Hospital"],"affiliations":[{"raw_affiliation_string":"Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232","https://openalex.org/I1325736334"]},{"raw_affiliation_string":"The Research Institute at Nationwide Children's Hospital","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055714609","display_name":"Maksim Kouza","orcid":"https://orcid.org/0000-0002-1704-9797"},"institutions":[{"id":"https://openalex.org/I1325736334","display_name":"Battelle","ror":"https://ror.org/01h5tnr73","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1325736334"]},{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]},{"id":"https://openalex.org/I4654613","display_name":"University of Warsaw","ror":"https://ror.org/039bjqg32","country_code":"PL","type":"education","lineage":["https://openalex.org/I4654613"]}],"countries":["PL","US"],"is_corresponding":false,"raw_author_name":"Maksim Kouza","raw_affiliation_strings":["Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093, Warsaw, Poland","University of Warsaw","The Research Institute at Nationwide Children\u2019s Hospital"],"affiliations":[{"raw_affiliation_string":"Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232","https://openalex.org/I1325736334"]},{"raw_affiliation_string":"Faculty of Chemistry, University of Warsaw, Pasteura 1, 02-093, Warsaw, Poland","institution_ids":["https://openalex.org/I4654613"]},{"raw_affiliation_string":"University of Warsaw","institution_ids":["https://openalex.org/I4654613"]},{"raw_affiliation_string":"The Research Institute at Nationwide Children\u2019s Hospital","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066655749","display_name":"Irina A. Buhimschi","orcid":"https://orcid.org/0000-0002-1701-1326"},"institutions":[{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]},{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Irina A. Buhimschi","raw_affiliation_strings":["Center for Perinatal Research, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH, USA","The Ohio State University College of Medicine","The Research Institute at Nationwide Children\u2019s Hospital"],"affiliations":[{"raw_affiliation_string":"Center for Perinatal Research, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232"]},{"raw_affiliation_string":"Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH, USA","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"The Ohio State University College of Medicine","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"The Research Institute at Nationwide Children\u2019s Hospital","institution_ids":["https://openalex.org/I1314135232"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086880109","display_name":"Andrzej Kloczkowski","orcid":"https://orcid.org/0000-0003-1002-5095"},"institutions":[{"id":"https://openalex.org/I52357470","display_name":"The Ohio State University","ror":"https://ror.org/00rs6vg23","country_code":"US","type":"education","lineage":["https://openalex.org/I52357470"]},{"id":"https://openalex.org/I1314135232","display_name":"Nationwide Children's Hospital","ror":"https://ror.org/003rfsp33","country_code":"US","type":"funder","lineage":["https://openalex.org/I1314135232"]},{"id":"https://openalex.org/I1325736334","display_name":"Battelle","ror":"https://ror.org/01h5tnr73","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1325736334"]},{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Andrzej Kloczkowski","raw_affiliation_strings":["Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH, USA","Future Value Creation Research Center, Nagoya University, Nagoya, Japan","Nagoya University","The Research Institute at Nationwide Children\u2019s Hospital","The Ohio State University College of Medicine"],"affiliations":[{"raw_affiliation_string":"Battelle Center for Mathematical Medicine, The Research Institute at Nationwide Children\u2019s Hospital, Columbus, OH, USA","institution_ids":["https://openalex.org/I1314135232","https://openalex.org/I1325736334"]},{"raw_affiliation_string":"Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH, USA","institution_ids":["https://openalex.org/I52357470"]},{"raw_affiliation_string":"Future Value Creation Research Center, Nagoya University, Nagoya, Japan","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"Nagoya University","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"The Research Institute at Nationwide Children\u2019s Hospital","institution_ids":["https://openalex.org/I1314135232"]},{"raw_affiliation_string":"The Ohio State University College of Medicine","institution_ids":["https://openalex.org/I52357470"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5025134890"],"corresponding_institution_ids":["https://openalex.org/I1314135232","https://openalex.org/I1325736334"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.11443433,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"245","last_page":"258"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/allosteric-regulation","display_name":"Allosteric regulation","score":0.9536718130111694},{"id":"https://openalex.org/keywords/centrality","display_name":"Centrality","score":0.5497938394546509},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5390201807022095},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4337156116962433},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3801475465297699},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.2948935031890869},{"id":"https://openalex.org/keywords/receptor","display_name":"Receptor","score":0.2238779366016388},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13529664278030396},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.07191154360771179}],"concepts":[{"id":"https://openalex.org/C166342909","wikidata":"https://www.wikidata.org/wiki/Q845326","display_name":"Allosteric regulation","level":3,"score":0.9536718130111694},{"id":"https://openalex.org/C53811970","wikidata":"https://www.wikidata.org/wiki/Q5062194","display_name":"Centrality","level":2,"score":0.5497938394546509},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5390201807022095},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4337156116962433},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3801475465297699},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.2948935031890869},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.2238779366016388},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13529664278030396},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.07191154360771179}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1007/978-3-030-17935-9_23","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17935-9_23","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:arXiv.org:1802.10207","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1802.10207","pdf_url":"https://arxiv.org/pdf/1802.10207","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"mag:2951329745","is_oa":true,"landing_page_url":"http://arxiv.org/pdf/1802.10207.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.1802.10207","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.1802.10207","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:1802.10207","is_oa":true,"landing_page_url":"http://arxiv.org/abs/1802.10207","pdf_url":"https://arxiv.org/pdf/1802.10207","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":115,"referenced_works":["https://openalex.org/W165214403","https://openalex.org/W1492653389","https://openalex.org/W1527813693","https://openalex.org/W1533618603","https://openalex.org/W1857789879","https://openalex.org/W1965917789","https://openalex.org/W1968807501","https://openalex.org/W1970613671","https://openalex.org/W1973834037","https://openalex.org/W1974032838","https://openalex.org/W1974105492","https://openalex.org/W1974758710","https://openalex.org/W1979965027","https://openalex.org/W1985225270","https://openalex.org/W1986743126","https://openalex.org/W1986934575","https://openalex.org/W1987104859","https://openalex.org/W1987958688","https://openalex.org/W1991764480","https://openalex.org/W1994801733","https://openalex.org/W1995765071","https://openalex.org/W1998093640","https://openalex.org/W2000670519","https://openalex.org/W2005392755","https://openalex.org/W2008545402","https://openalex.org/W2008620264","https://openalex.org/W2009123297","https://openalex.org/W2013751737","https://openalex.org/W2014217492","https://openalex.org/W2014252415","https://openalex.org/W2015117663","https://openalex.org/W2016944307","https://openalex.org/W2018365823","https://openalex.org/W2022497131","https://openalex.org/W2024519892","https://openalex.org/W2024912628","https://openalex.org/W2025543856","https://openalex.org/W2039975390","https://openalex.org/W2042441875","https://openalex.org/W2049598343","https://openalex.org/W2051658231","https://openalex.org/W2056944867","https://openalex.org/W2057594534","https://openalex.org/W2059093611","https://openalex.org/W2060744122","https://openalex.org/W2063031793","https://openalex.org/W2063252182","https://openalex.org/W2071818582","https://openalex.org/W2082445321","https://openalex.org/W2082915760","https://openalex.org/W2083975423","https://openalex.org/W2085347260","https://openalex.org/W2085928981","https://openalex.org/W2086550994","https://openalex.org/W2087194317","https://openalex.org/W2087495141","https://openalex.org/W2090110430","https://openalex.org/W2091060891","https://openalex.org/W2091710329","https://openalex.org/W2092006899","https://openalex.org/W2096346675","https://openalex.org/W2103626206","https://openalex.org/W2105041993","https://openalex.org/W2108102848","https://openalex.org/W2109540804","https://openalex.org/W2112090702","https://openalex.org/W2112461976","https://openalex.org/W2115443902","https://openalex.org/W2118733486","https://openalex.org/W2122320718","https://openalex.org/W2124676068","https://openalex.org/W2126157913","https://openalex.org/W2128577591","https://openalex.org/W2130479394","https://openalex.org/W2130863822","https://openalex.org/W2135303325","https://openalex.org/W2135395577","https://openalex.org/W2139230158","https://openalex.org/W2141370945","https://openalex.org/W2141845923","https://openalex.org/W2142635246","https://openalex.org/W2143586648","https://openalex.org/W2153953580","https://openalex.org/W2156086745","https://openalex.org/W2159291387","https://openalex.org/W2163480486","https://openalex.org/W2164243919","https://openalex.org/W2164385498","https://openalex.org/W2164831247","https://openalex.org/W2168481503","https://openalex.org/W2169750653","https://openalex.org/W2171590707","https://openalex.org/W2181723522","https://openalex.org/W2229906614","https://openalex.org/W2265800909","https://openalex.org/W2278873272","https://openalex.org/W2283716387","https://openalex.org/W2283818235","https://openalex.org/W2341285941","https://openalex.org/W2408144575","https://openalex.org/W2413334978","https://openalex.org/W2413568519","https://openalex.org/W2561366344","https://openalex.org/W2585377159","https://openalex.org/W2605210187","https://openalex.org/W2753414885","https://openalex.org/W2792382965","https://openalex.org/W2807427457","https://openalex.org/W2886055318","https://openalex.org/W2896056828","https://openalex.org/W2898738525","https://openalex.org/W2962721909","https://openalex.org/W3030176383","https://openalex.org/W4241727697","https://openalex.org/W4252684946"],"related_works":["https://openalex.org/W2143185848","https://openalex.org/W2122854841","https://openalex.org/W2072228739","https://openalex.org/W2135498219","https://openalex.org/W2003066987","https://openalex.org/W2898987406","https://openalex.org/W2742834898","https://openalex.org/W2031017454","https://openalex.org/W2151595894","https://openalex.org/W2136011546","https://openalex.org/W1529325755","https://openalex.org/W1808342959","https://openalex.org/W2897219080","https://openalex.org/W2039063819","https://openalex.org/W2530234627","https://openalex.org/W2052157693","https://openalex.org/W1980777635","https://openalex.org/W1698180318","https://openalex.org/W2950564803","https://openalex.org/W2044507120"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
