{"id":"https://openalex.org/W2943402909","doi":"https://doi.org/10.1007/978-3-030-17935-9_15","title":"Associating Protein Domains with Biological Functions: A Tripartite Network Approach","display_name":"Associating Protein Domains with Biological Functions: A Tripartite Network Approach","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2943402909","doi":"https://doi.org/10.1007/978-3-030-17935-9_15","mag":"2943402909"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-17935-9_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17935-9_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038281376","display_name":"Elena Rojano","orcid":"https://orcid.org/0000-0002-2678-710X"},"institutions":[{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Elena Rojano","raw_affiliation_strings":["Department of Molecular Biology and Biochemistry, University of Malaga, Bulevar Louis Pasteur, 31, 29010, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, University of Malaga, Bulevar Louis Pasteur, 31, 29010, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032959797","display_name":"James R. Perkins","orcid":"https://orcid.org/0000-0003-4108-096X"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I2801357902","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886","country_code":"ES","type":"funder","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210161579","display_name":"Instituto de Investigaci\u00f3n de Enfermedades Raras","ror":"https://ror.org/05mwdqq98","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210161579","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"James Richard Perkins","raw_affiliation_strings":["CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain","institution_ids":["https://openalex.org/I4210161579","https://openalex.org/I4210115082","https://openalex.org/I2801357902"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036351252","display_name":"Ian Sillitoe","orcid":"https://orcid.org/0000-0003-1091-9144"},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Ian Sillitoe","raw_affiliation_strings":["Department of Structural and Molecular Biology, University College London, Gower Street, London, WC1E 6BT, UK"],"affiliations":[{"raw_affiliation_string":"Department of Structural and Molecular Biology, University College London, Gower Street, London, WC1E 6BT, UK","institution_ids":["https://openalex.org/I4210157240","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081250379","display_name":"Christine Orengo","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]},{"id":"https://openalex.org/I4210157240","display_name":"Institute of Structural and Molecular Biology","ror":"https://ror.org/05wsetc54","country_code":"GB","type":"facility","lineage":["https://openalex.org/I124357947","https://openalex.org/I124357947","https://openalex.org/I4210157240","https://openalex.org/I45129253","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christine Orengo","raw_affiliation_strings":["Department of Structural and Molecular Biology, University College London, Gower Street, London, WC1E 6BT, UK"],"affiliations":[{"raw_affiliation_string":"Department of Structural and Molecular Biology, University College London, Gower Street, London, WC1E 6BT, UK","institution_ids":["https://openalex.org/I4210157240","https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065049632","display_name":"Juan A. G. Ranea","orcid":"https://orcid.org/0000-0003-0327-1837"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I2801357902","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886","country_code":"ES","type":"funder","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I82767444","display_name":"Universidad de M\u00e1laga","ror":"https://ror.org/036b2ww28","country_code":"ES","type":"education","lineage":["https://openalex.org/I82767444"]},{"id":"https://openalex.org/I4210161579","display_name":"Instituto de Investigaci\u00f3n de Enfermedades Raras","ror":"https://ror.org/05mwdqq98","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210161579","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Juan Antonio Garc\u00eda Ranea","raw_affiliation_strings":["CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain","Department of Molecular Biology and Biochemistry, University of Malaga, Bulevar Louis Pasteur, 31, 29010, Malaga, Spain"],"affiliations":[{"raw_affiliation_string":"CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain","institution_ids":["https://openalex.org/I4210161579","https://openalex.org/I4210115082","https://openalex.org/I2801357902"]},{"raw_affiliation_string":"Department of Molecular Biology and Biochemistry, University of Malaga, Bulevar Louis Pasteur, 31, 29010, Malaga, Spain","institution_ids":["https://openalex.org/I82767444"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038138862","display_name":"Pedro Seoane","orcid":"https://orcid.org/0000-0002-3020-1415"},"institutions":[{"id":"https://openalex.org/I4210115082","display_name":"Centro de Investigaci\u00f3n Biom\u00e9dica en Red","ror":"https://ror.org/02g87qh62","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I4210161579","display_name":"Instituto de Investigaci\u00f3n de Enfermedades Raras","ror":"https://ror.org/05mwdqq98","country_code":"ES","type":"facility","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4210161579","https://openalex.org/I4387152914"]},{"id":"https://openalex.org/I2801357902","display_name":"Instituto de Salud Carlos III","ror":"https://ror.org/00ca2c886","country_code":"ES","type":"funder","lineage":["https://openalex.org/I2801357902","https://openalex.org/I4387152914"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pedro Seoane","raw_affiliation_strings":["CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain"],"affiliations":[{"raw_affiliation_string":"CIBER de Enfermedades Raras, ISCIII, Av. Monforte de Lemos, 3-5. Pabellon 11. Planta 0, 28029, Madrid, Spain","institution_ids":["https://openalex.org/I4210161579","https://openalex.org/I4210115082","https://openalex.org/I2801357902"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5032959797"],"corresponding_institution_ids":["https://openalex.org/I2801357902","https://openalex.org/I4210115082","https://openalex.org/I4210161579"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.9703,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.7614415,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"155","last_page":"164"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8390169143676758},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7531706690788269},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.684434175491333},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5697439312934875},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5157180428504944},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5098901987075806},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.505690336227417},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4235416054725647},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.36767637729644775},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.34044021368026733},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3261173963546753},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3236551880836487},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15327200293540955},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14106926321983337},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.07535126805305481}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8390169143676758},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7531706690788269},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.684434175491333},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5697439312934875},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5157180428504944},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5098901987075806},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.505690336227417},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4235416054725647},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.36767637729644775},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.34044021368026733},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3261173963546753},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3236551880836487},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15327200293540955},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14106926321983337},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.07535126805305481},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-17935-9_15","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-17935-9_15","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8549584056","display_name":null,"funder_award_id":"BB/R014892/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W1985512202","https://openalex.org/W1989277387","https://openalex.org/W1998490996","https://openalex.org/W2024708232","https://openalex.org/W2031903428","https://openalex.org/W2068072987","https://openalex.org/W2089467986","https://openalex.org/W2100383158","https://openalex.org/W2159482845","https://openalex.org/W2163584414","https://openalex.org/W2544136853","https://openalex.org/W2558272290","https://openalex.org/W2603053732","https://openalex.org/W2604808360","https://openalex.org/W2609826536","https://openalex.org/W2770307029","https://openalex.org/W2770646498","https://openalex.org/W2900896604","https://openalex.org/W7075630220"],"related_works":["https://openalex.org/W2551839783","https://openalex.org/W4386401670","https://openalex.org/W2956207900","https://openalex.org/W2790781282","https://openalex.org/W4313887725","https://openalex.org/W2334025507","https://openalex.org/W4296124993","https://openalex.org/W2939010697","https://openalex.org/W1970486251","https://openalex.org/W4229451835"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
