{"id":"https://openalex.org/W2937064723","doi":"https://doi.org/10.1007/978-3-030-16272-6_9","title":"Cloud-Based High Throughput Virtual Screening in Novel Drug Discovery","display_name":"Cloud-Based High Throughput Virtual Screening in Novel Drug Discovery","publication_year":2019,"publication_date":"2019-01-01","ids":{"openalex":"https://openalex.org/W2937064723","doi":"https://doi.org/10.1007/978-3-030-16272-6_9","mag":"2937064723"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-16272-6_9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-16272-6_9","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-16272-6_9.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-16272-6_9.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063238098","display_name":"Abdurrahman Ol\u011fa\u00e7","orcid":"https://orcid.org/0000-0001-8470-4942"},"institutions":[{"id":"https://openalex.org/I95634034","display_name":"Gazi University","ror":"https://ror.org/054xkpr46","country_code":"TR","type":"education","lineage":["https://openalex.org/I95634034"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Abdurrahman Ol\u011fa\u00e7","raw_affiliation_strings":["Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, 06330, Ankara, Turkey","Laboratory of Molecular Modeling, Evias Pharmaceutical R&D Ltd., 06830, Ankara, Turkey","Laboratory of Molecular Modeling, Evias Pharmaceutical R&D Ltd., Ankara, Turkey","Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, Ankara, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, 06330, Ankara, Turkey","institution_ids":["https://openalex.org/I95634034"]},{"raw_affiliation_string":"Laboratory of Molecular Modeling, Evias Pharmaceutical R&D Ltd., 06830, Ankara, Turkey","institution_ids":[]},{"raw_affiliation_string":"Laboratory of Molecular Modeling, Evias Pharmaceutical R&D Ltd., Ankara, Turkey","institution_ids":[]},{"raw_affiliation_string":"Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, Ankara, Turkey","institution_ids":["https://openalex.org/I95634034"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063206470","display_name":"Asl\u0131 T\u00fcre","orcid":null},"institutions":[{"id":"https://openalex.org/I74897591","display_name":"Marmara University","ror":"https://ror.org/02kswqa67","country_code":"TR","type":"education","lineage":["https://openalex.org/I74897591"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Asl\u0131 T\u00fcre","raw_affiliation_strings":["Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Marmara University, 34668, Istanbul, Turkey","Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Marmara University, Istanbul, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Marmara University, 34668, Istanbul, Turkey","institution_ids":["https://openalex.org/I74897591"]},{"raw_affiliation_string":"Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Marmara University, Istanbul, Turkey","institution_ids":["https://openalex.org/I74897591"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050521462","display_name":"Simla Ol\u011fa\u00e7","orcid":"https://orcid.org/0000-0001-6753-3707"},"institutions":[{"id":"https://openalex.org/I95634034","display_name":"Gazi University","ror":"https://ror.org/054xkpr46","country_code":"TR","type":"education","lineage":["https://openalex.org/I95634034"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Simla Ol\u011fa\u00e7","raw_affiliation_strings":["Department of Biochemistry, Faculty of Pharmacy, Gazi University, 06330, Ankara, Turkey","Department of Biochemistry, Faculty of Pharmacy, Gazi University, Ankara, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Faculty of Pharmacy, Gazi University, 06330, Ankara, Turkey","institution_ids":["https://openalex.org/I95634034"]},{"raw_affiliation_string":"Department of Biochemistry, Faculty of Pharmacy, Gazi University, Ankara, Turkey","institution_ids":["https://openalex.org/I95634034"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089261582","display_name":"Steffen M\u00f6ller","orcid":"https://orcid.org/0000-0002-7187-4683"},"institutions":[{"id":"https://openalex.org/I4665924","display_name":"University of Rostock","ror":"https://ror.org/03zdwsf69","country_code":"DE","type":"education","lineage":["https://openalex.org/I4665924"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Steffen M\u00f6ller","raw_affiliation_strings":["Institute for Biostatistics and Informatics in Medicine and Ageing Research (IBIMA), Rostock University Medical Center, 18057, Rostock, Germany","Institute for Biostatistics and Informatics in Medicine and Ageing Research (IBIMA), Rostock University Medical Center, Rostock, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Biostatistics and Informatics in Medicine and Ageing Research (IBIMA), Rostock University Medical Center, 18057, Rostock, Germany","institution_ids":["https://openalex.org/I4665924"]},{"raw_affiliation_string":"Institute for Biostatistics and Informatics in Medicine and Ageing Research (IBIMA), Rostock University Medical Center, Rostock, Germany","institution_ids":["https://openalex.org/I4665924"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5063238098"],"corresponding_institution_ids":["https://openalex.org/I95634034"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":5.869,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.96575639,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"250","last_page":"278"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.97079998254776,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11407","display_name":"Innovative Microfluidic and Catalytic Techniques Innovation","score":0.9524999856948853,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.8231276869773865},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7896212935447693},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.7143500447273254},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.6723056435585022},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.6489160060882568},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6212328672409058},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5551267266273499},{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.490263968706131},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.44790056347846985},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.41262516379356384},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.41120439767837524},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.17184600234031677},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.162980854511261}],"concepts":[{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.8231276869773865},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7896212935447693},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.7143500447273254},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.6723056435585022},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.6489160060882568},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6212328672409058},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5551267266273499},{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.490263968706131},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.44790056347846985},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.41262516379356384},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.41120439767837524},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.17184600234031677},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.162980854511261},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-16272-6_9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-16272-6_9","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-16272-6_9.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/978-3-030-16272-6_9","is_oa":true,"landing_page_url":"https://doi.org/10.1007/978-3-030-16272-6_9","pdf_url":"https://link.springer.com/content/pdf/10.1007%2F978-3-030-16272-6_9.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[{"score":0.4699999988079071,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G7025299907","display_name":null,"funder_award_id":"112S596","funder_id":"https://openalex.org/F4320322626","funder_display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu"},{"id":"https://openalex.org/G7942609545","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320322626","funder_display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu"}],"funders":[{"id":"https://openalex.org/F4320322626","display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu","ror":"https://ror.org/04w9kkr77"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2937064723.pdf","grobid_xml":"https://content.openalex.org/works/W2937064723.grobid-xml"},"referenced_works_count":115,"referenced_works":["https://openalex.org/W141181845","https://openalex.org/W195064984","https://openalex.org/W1500036797","https://openalex.org/W1532494422","https://openalex.org/W1565098568","https://openalex.org/W1574320475","https://openalex.org/W1680854530","https://openalex.org/W1835740130","https://openalex.org/W1896254721","https://openalex.org/W1971618381","https://openalex.org/W1972017488","https://openalex.org/W1973106804","https://openalex.org/W1975293246","https://openalex.org/W1975695570","https://openalex.org/W1976892175","https://openalex.org/W1979900513","https://openalex.org/W1980047995","https://openalex.org/W1981737096","https://openalex.org/W1982885147","https://openalex.org/W1983376893","https://openalex.org/W1992787746","https://openalex.org/W1993352447","https://openalex.org/W2000572824","https://openalex.org/W2000822184","https://openalex.org/W2004595546","https://openalex.org/W2007249694","https://openalex.org/W2008525757","https://openalex.org/W2009297402","https://openalex.org/W2009313526","https://openalex.org/W2016047921","https://openalex.org/W2016111219","https://openalex.org/W2017254234","https://openalex.org/W2018478612","https://openalex.org/W2018518196","https://openalex.org/W2019796461","https://openalex.org/W2026610312","https://openalex.org/W2027482274","https://openalex.org/W2030224115","https://openalex.org/W2035753075","https://openalex.org/W2037003798","https://openalex.org/W2040369353","https://openalex.org/W2061843861","https://openalex.org/W2071830424","https://openalex.org/W2072875131","https://openalex.org/W2084144449","https://openalex.org/W2091702890","https://openalex.org/W2095556304","https://openalex.org/W2096864392","https://openalex.org/W2097088354","https://openalex.org/W2098451503","https://openalex.org/W2099001405","https://openalex.org/W2101078720","https://openalex.org/W2109872885","https://openalex.org/W2116238734","https://openalex.org/W2118006136","https://openalex.org/W2122995608","https://openalex.org/W2124074156","https://openalex.org/W2124575784","https://openalex.org/W2128116330","https://openalex.org/W2129556489","https://openalex.org/W2130479394","https://openalex.org/W2132073122","https://openalex.org/W2135732933","https://openalex.org/W2137052779","https://openalex.org/W2143916182","https://openalex.org/W2145374174","https://openalex.org/W2147526198","https://openalex.org/W2151460035","https://openalex.org/W2154019529","https://openalex.org/W2157122545","https://openalex.org/W2158714788","https://openalex.org/W2169150541","https://openalex.org/W2170146596","https://openalex.org/W2177317049","https://openalex.org/W2177551934","https://openalex.org/W2219397146","https://openalex.org/W2296686360","https://openalex.org/W2315953949","https://openalex.org/W2322193123","https://openalex.org/W2322817075","https://openalex.org/W2324777999","https://openalex.org/W2326306645","https://openalex.org/W2336040088","https://openalex.org/W2338548910","https://openalex.org/W2340782621","https://openalex.org/W2399060478","https://openalex.org/W2408721747","https://openalex.org/W2413882585","https://openalex.org/W2423210039","https://openalex.org/W2494898695","https://openalex.org/W2501668210","https://openalex.org/W2516875311","https://openalex.org/W2558999090","https://openalex.org/W2587888544","https://openalex.org/W2615136515","https://openalex.org/W2739999456","https://openalex.org/W2749988758","https://openalex.org/W2765426977","https://openalex.org/W2765910235","https://openalex.org/W2883524422","https://openalex.org/W2894601800","https://openalex.org/W2902478439","https://openalex.org/W2902863035","https://openalex.org/W2903741924","https://openalex.org/W2905261310","https://openalex.org/W3021556039","https://openalex.org/W4211188481","https://openalex.org/W4233037448","https://openalex.org/W4242320552","https://openalex.org/W4246685301","https://openalex.org/W4248107770","https://openalex.org/W4255492271","https://openalex.org/W4285719527","https://openalex.org/W6730543993","https://openalex.org/W6820645955"],"related_works":["https://openalex.org/W3180887190","https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W2320211095","https://openalex.org/W2308164565","https://openalex.org/W2059230675","https://openalex.org/W2376003823","https://openalex.org/W2594726310","https://openalex.org/W2355193834","https://openalex.org/W2907597838"],"abstract_inverted_index":{"Drug":[0,24],"discovery":[1,65,105],"and":[2,10,16,72,101,106,122,128,139,186,195],"development":[3,107,210],"requires":[4],"the":[5,45,79,103,164,170,190,199],"integration":[6,197],"of":[7,19,44,63,70,97,163,193,211],"multiple":[8],"scientific":[9],"technological":[11],"disciplines":[12],"in":[13,31,52,60,81,160],"chemistry,":[14],"biology":[15],"extensive":[17],"use":[18],"information":[20],"technology.":[21],"Computer":[22],"Aided":[23],"Discovery":[25],"(CADD)":[26],"methods":[27,50],"are":[28,86,110],"being":[29,87],"used":[30,51],"this":[32],"work":[33],"area":[34],"with":[35,94,148,176],"several":[36],"different":[37,161],"workflows.":[38],"Virtual":[39],"screening":[40],"(VS)":[41],"is":[42],"one":[43],"most":[46],"often":[47],"applied":[48,59,215],"CADD":[49],"rational":[53],"drug":[54,64,104,217],"design,":[55],"which":[56],"may":[57,203],"be":[58,126,133,137,146,155,158,204,214],"early":[61],"stages":[62,162],"pipeline.":[66,108],"The":[67],"increasing":[68],"number":[69],"modular":[71],"scalable":[73],"cloud-based":[74],"computational":[75,178],"platforms":[76,85,152],"can":[77,132,136,145],"assist":[78],"needs":[80],"VS":[82,114,143,212],"studies.":[83],"Such":[84,151],"developed":[88],"to":[89,91,99,112,117,125,157,168,173,198,213],"try":[90],"help":[92],"researchers":[93],"various":[95,177],"types":[96],"applications":[98],"prepare":[100],"guide":[102],"They":[109],"designed":[111],"perform":[113],"efficiently,":[115],"aimed":[116],"identify":[118],"commercially":[119],"available":[120],"lead-like":[121],"drug-like":[123],"compounds":[124],"acquired":[127],"tested.":[129],"Chemical":[130],"datasets":[131],"built,":[134],"libraries":[135],"analyzed,":[138],"structure-based":[140],"or":[141],"ligand-based":[142],"studies":[144],"performed":[147],"cloud":[149,200],"technologies.":[150],"could":[153],"also":[154],"adapted":[156],"included":[159],"pharmaceutical":[165],"R&D":[166],"process":[167],"rationalize":[169],"needs,":[171],"e.g.":[172],"repurpose":[174],"drugs,":[175],"scalability":[179],"options.":[180],"This":[181,202],"chapter":[182],"introduces":[183],"basic":[184],"concepts":[185],"tools":[187],"by":[188,216],"outlining":[189],"general":[191],"workflows":[192],"VS,":[194],"their":[196],"platforms.":[201],"a":[205],"seed":[206],"for":[207],"further":[208],"inter-disciplinary":[209],"hunters.":[218]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
