{"id":"https://openalex.org/W2907277173","doi":"https://doi.org/10.1007/978-3-030-06016-9_3","title":"Construction and Visualization of Dynamic Biological Networks: Benchmarking the Neo4J Graph Database","display_name":"Construction and Visualization of Dynamic Biological Networks: Benchmarking the Neo4J Graph Database","publication_year":2018,"publication_date":"2018-12-29","ids":{"openalex":"https://openalex.org/W2907277173","doi":"https://doi.org/10.1007/978-3-030-06016-9_3","mag":"2907277173"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-06016-9_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-06016-9_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/135054","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022588695","display_name":"Lena Wiese","orcid":"https://orcid.org/0000-0003-3515-9209"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Lena Wiese","raw_affiliation_strings":["Institute of Computer Science, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":"https://orcid.org/0000-0003-3515-9209","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051532794","display_name":"Chimi Wangmo","orcid":"https://orcid.org/0000-0002-8921-398X"},"institutions":[{"id":"https://openalex.org/I61702852","display_name":"Royal University of Bhutan","ror":"https://ror.org/03hqan520","country_code":"BT","type":"education","lineage":["https://openalex.org/I61702852"]}],"countries":["BT"],"is_corresponding":false,"raw_author_name":"Chimi Wangmo","raw_affiliation_strings":["Gyalpozhing College of Information Technology, Royal University of Bhutan, Thimphu, Bhutan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Gyalpozhing College of Information Technology, Royal University of Bhutan, Thimphu, Bhutan","institution_ids":["https://openalex.org/I61702852"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074135982","display_name":"Lukas Steuernagel","orcid":"https://orcid.org/0000-0003-0043-1436"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lukas Steuernagel","raw_affiliation_strings":["Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018615886","display_name":"Armin O. Schmitt","orcid":"https://orcid.org/0000-0002-4910-9467"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Armin O. Schmitt","raw_affiliation_strings":["Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany","Center for Integrated Breeding Research (CiBreed), University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]},{"raw_affiliation_string":"Center for Integrated Breeding Research (CiBreed), University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5085199270","display_name":"Mehmet G\u00fclta\u015f","orcid":"https://orcid.org/0000-0003-3297-3192"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mehmet G\u00fcltas","raw_affiliation_strings":["Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany","Center for Integrated Breeding Research (CiBreed), University of G\u00f6ttingen, G\u00f6ttingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Breeding Informatics Group, Department of Animal Sciences, University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]},{"raw_affiliation_string":"Center for Integrated Breeding Research (CiBreed), University of G\u00f6ttingen, G\u00f6ttingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5022588695"],"corresponding_institution_ids":["https://openalex.org/I74656192"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.8237,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":{"value":0.75580368,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"33","last_page":"43"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8677016496658325},{"id":"https://openalex.org/keywords/benchmarking","display_name":"Benchmarking","score":0.7521633505821228},{"id":"https://openalex.org/keywords/graph-database","display_name":"Graph database","score":0.6928427219390869},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6044989824295044},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4913391172885895},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.4820433557033539},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.41631826758384705},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2862395942211151},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2814829349517822}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8677016496658325},{"id":"https://openalex.org/C86251818","wikidata":"https://www.wikidata.org/wiki/Q816754","display_name":"Benchmarking","level":2,"score":0.7521633505821228},{"id":"https://openalex.org/C176225458","wikidata":"https://www.wikidata.org/wiki/Q595971","display_name":"Graph database","level":3,"score":0.6928427219390869},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6044989824295044},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4913391172885895},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.4820433557033539},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.41631826758384705},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2862395942211151},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2814829349517822},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-030-06016-9_3","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-06016-9_3","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:publications.goettingen-research-online.de:2/135054","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/135054","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:publications.goettingen-research-online.de:2/135054","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/135054","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W347535695","https://openalex.org/W1851422093","https://openalex.org/W1952633632","https://openalex.org/W1969487642","https://openalex.org/W2015382377","https://openalex.org/W2037886921","https://openalex.org/W2071531104","https://openalex.org/W2101053282","https://openalex.org/W2108011868","https://openalex.org/W2108797218","https://openalex.org/W2108871359","https://openalex.org/W2119863860","https://openalex.org/W2121015328","https://openalex.org/W2128704089","https://openalex.org/W2132352688","https://openalex.org/W2139997707","https://openalex.org/W2140445011","https://openalex.org/W2146749911","https://openalex.org/W2155123448","https://openalex.org/W2155142785","https://openalex.org/W2162778212","https://openalex.org/W2163296115","https://openalex.org/W2165706283","https://openalex.org/W2181632153","https://openalex.org/W2184124585","https://openalex.org/W2209883607","https://openalex.org/W2217100747","https://openalex.org/W2324796278","https://openalex.org/W2407395348","https://openalex.org/W2615147949","https://openalex.org/W2766891074","https://openalex.org/W2915975108","https://openalex.org/W2918489699","https://openalex.org/W2918921333","https://openalex.org/W2949475756","https://openalex.org/W3099289621","https://openalex.org/W3146488696","https://openalex.org/W3176001771","https://openalex.org/W6650995103"],"related_works":["https://openalex.org/W1503154538","https://openalex.org/W251114125","https://openalex.org/W2346931493","https://openalex.org/W2525150146","https://openalex.org/W4280650056","https://openalex.org/W1912392752","https://openalex.org/W1990088789","https://openalex.org/W2101268032","https://openalex.org/W1238982514","https://openalex.org/W4240492454"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}