{"id":"https://openalex.org/W2906842697","doi":"https://doi.org/10.1007/978-3-030-05807-4_19","title":"Hybrid Codes for Atomistic Simulations on the Desmos Supercomputer: GPU-acceleration, Scalability and Parallel I/O","display_name":"Hybrid Codes for Atomistic Simulations on the Desmos Supercomputer: GPU-acceleration, Scalability and Parallel I/O","publication_year":2018,"publication_date":"2018-12-30","ids":{"openalex":"https://openalex.org/W2906842697","doi":"https://doi.org/10.1007/978-3-030-05807-4_19","mag":"2906842697"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-05807-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-05807-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020060405","display_name":"Nikolay Kondratyuk","orcid":"https://orcid.org/0000-0002-8286-0447"},"institutions":[{"id":"https://openalex.org/I118501908","display_name":"National Research University Higher School of Economics","ror":"https://ror.org/055f7t516","country_code":"RU","type":"education","lineage":["https://openalex.org/I118501908"]},{"id":"https://openalex.org/I4210158550","display_name":"Joint Institute for High Temperatures","ror":"https://ror.org/04gns8903","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210158550","https://openalex.org/I4210164537"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Nikolay Kondratyuk","raw_affiliation_strings":["Joint Institute for High Temperatures of RAS, Moscow, Russia","Moscow Institute of Physics and Technology, Dolgoprudny, Russia","National Research University Higher School of Economics, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Joint Institute for High Temperatures of RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210158550"]},{"raw_affiliation_string":"Moscow Institute of Physics and Technology, Dolgoprudny, Russia","institution_ids":["https://openalex.org/I153845743"]},{"raw_affiliation_string":"National Research University Higher School of Economics, Moscow, Russia","institution_ids":["https://openalex.org/I118501908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079495309","display_name":"Grigory Smirnov","orcid":"https://orcid.org/0000-0002-9305-407X"},"institutions":[{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I4210158550","display_name":"Joint Institute for High Temperatures","ror":"https://ror.org/04gns8903","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210158550","https://openalex.org/I4210164537"]},{"id":"https://openalex.org/I118501908","display_name":"National Research University Higher School of Economics","ror":"https://ror.org/055f7t516","country_code":"RU","type":"education","lineage":["https://openalex.org/I118501908"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Grigory Smirnov","raw_affiliation_strings":["Joint Institute for High Temperatures of RAS, Moscow, Russia","Moscow Institute of Physics and Technology, Dolgoprudny, Russia","National Research University Higher School of Economics, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Joint Institute for High Temperatures of RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210158550"]},{"raw_affiliation_string":"Moscow Institute of Physics and Technology, Dolgoprudny, Russia","institution_ids":["https://openalex.org/I153845743"]},{"raw_affiliation_string":"National Research University Higher School of Economics, Moscow, Russia","institution_ids":["https://openalex.org/I118501908"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075717752","display_name":"Vladimir Stegailov","orcid":"https://orcid.org/0000-0002-5349-3991"},"institutions":[{"id":"https://openalex.org/I118501908","display_name":"National Research University Higher School of Economics","ror":"https://ror.org/055f7t516","country_code":"RU","type":"education","lineage":["https://openalex.org/I118501908"]},{"id":"https://openalex.org/I153845743","display_name":"Moscow Institute of Physics and Technology","ror":"https://ror.org/00v0z9322","country_code":"RU","type":"education","lineage":["https://openalex.org/I153845743"]},{"id":"https://openalex.org/I4210158550","display_name":"Joint Institute for High Temperatures","ror":"https://ror.org/04gns8903","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I4210158550","https://openalex.org/I4210164537"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Vladimir Stegailov","raw_affiliation_strings":["Joint Institute for High Temperatures of RAS, Moscow, Russia","Moscow Institute of Physics and Technology, Dolgoprudny, Russia","National Research University Higher School of Economics, Moscow, Russia"],"affiliations":[{"raw_affiliation_string":"Joint Institute for High Temperatures of RAS, Moscow, Russia","institution_ids":["https://openalex.org/I4210158550"]},{"raw_affiliation_string":"Moscow Institute of Physics and Technology, Dolgoprudny, Russia","institution_ids":["https://openalex.org/I153845743"]},{"raw_affiliation_string":"National Research University Higher School of Economics, Moscow, Russia","institution_ids":["https://openalex.org/I118501908"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5020060405"],"corresponding_institution_ids":["https://openalex.org/I118501908","https://openalex.org/I153845743","https://openalex.org/I4210158550"],"apc_list":null,"apc_paid":null,"fwci":4.5995,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.94170404,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"218","last_page":"229"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10591","display_name":"Theoretical and Computational Physics","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/3104","display_name":"Condensed Matter Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10591","display_name":"Theoretical and Computational Physics","score":0.9936000108718872,"subfield":{"id":"https://openalex.org/subfields/3104","display_name":"Condensed Matter Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10054","display_name":"Parallel Computing and Optimization Techniques","score":0.9894999861717224,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.8708013296127319},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.8027743101119995},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7791226506233215},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.7019401788711548},{"id":"https://openalex.org/keywords/acceleration","display_name":"Acceleration","score":0.6383776664733887},{"id":"https://openalex.org/keywords/computational-science","display_name":"Computational science","score":0.6249073147773743},{"id":"https://openalex.org/keywords/general-purpose-computing-on-graphics-processing-units","display_name":"General-purpose computing on graphics processing units","score":0.5137911438941956},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.5041958093643188},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.4345269203186035},{"id":"https://openalex.org/keywords/massively-parallel","display_name":"Massively parallel","score":0.42472583055496216},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.15648001432418823},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.15337970852851868},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.14160552620887756},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.13441479206085205},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.0956462025642395},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.0949050784111023}],"concepts":[{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.8708013296127319},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.8027743101119995},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7791226506233215},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.7019401788711548},{"id":"https://openalex.org/C117896860","wikidata":"https://www.wikidata.org/wiki/Q11376","display_name":"Acceleration","level":2,"score":0.6383776664733887},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.6249073147773743},{"id":"https://openalex.org/C50630238","wikidata":"https://www.wikidata.org/wiki/Q971505","display_name":"General-purpose computing on graphics processing units","level":3,"score":0.5137911438941956},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.5041958093643188},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.4345269203186035},{"id":"https://openalex.org/C190475519","wikidata":"https://www.wikidata.org/wiki/Q544384","display_name":"Massively parallel","level":2,"score":0.42472583055496216},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.15648001432418823},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.15337970852851868},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.14160552620887756},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.13441479206085205},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.0956462025642395},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0949050784111023},{"id":"https://openalex.org/C74650414","wikidata":"https://www.wikidata.org/wiki/Q11397","display_name":"Classical mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-3-030-05807-4_19","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-05807-4_19","pdf_url":null,"source":{"id":"https://openalex.org/S2764900261","display_name":"Communications in computer and information science","issn_l":"1865-0929","issn":["1865-0929","1865-0937"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Communications in Computer and Information Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Affordable and clean energy","score":0.6600000262260437,"id":"https://metadata.un.org/sdg/7"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":26,"referenced_works":["https://openalex.org/W170299757","https://openalex.org/W1031578623","https://openalex.org/W1815794495","https://openalex.org/W1895692106","https://openalex.org/W1981021420","https://openalex.org/W2013807069","https://openalex.org/W2019465613","https://openalex.org/W2055564206","https://openalex.org/W2061806005","https://openalex.org/W2062454596","https://openalex.org/W2076198800","https://openalex.org/W2078794610","https://openalex.org/W2082128407","https://openalex.org/W2082301489","https://openalex.org/W2099952176","https://openalex.org/W2136141445","https://openalex.org/W2166379031","https://openalex.org/W2168363974","https://openalex.org/W2407057568","https://openalex.org/W2519398037","https://openalex.org/W2555578994","https://openalex.org/W2555751324","https://openalex.org/W2606360323","https://openalex.org/W2790285892","https://openalex.org/W3103156673","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W1963859303","https://openalex.org/W2364044215","https://openalex.org/W2389600408","https://openalex.org/W240129890","https://openalex.org/W3048701459","https://openalex.org/W2149078538","https://openalex.org/W2080146221","https://openalex.org/W2546223573","https://openalex.org/W2370314112","https://openalex.org/W1912958759"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}