{"id":"https://openalex.org/W3134981461","doi":"https://doi.org/10.1007/978-3-030-00834-5_13","title":"Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees","display_name":"Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees","publication_year":2018,"publication_date":"2018-01-01","ids":{"openalex":"https://openalex.org/W3134981461","doi":"https://doi.org/10.1007/978-3-030-00834-5_13","mag":"3134981461"},"language":"en","primary_location":{"id":"doi:10.1007/978-3-030-00834-5_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-00834-5_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/134810","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056495649","display_name":"Thomas Dencker","orcid":"https://orcid.org/0000-0002-5851-0068"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Dencker","raw_affiliation_strings":["Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038295086","display_name":"Chris-Andr\u00e9 Leimeister","orcid":"https://orcid.org/0000-0002-5742-2744"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Chris-Andr\u00e9 Leimeister","raw_affiliation_strings":["Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany","institution_ids":["https://openalex.org/I74656192"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041365165","display_name":"Michael Gerth","orcid":"https://orcid.org/0000-0001-7553-4072"},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Michael Gerth","raw_affiliation_strings":["Institute for Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool, L69 7ZB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool, L69 7ZB, UK","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016158333","display_name":"Christoph Bleidorn","orcid":"https://orcid.org/0000-0001-7295-6616"},"institutions":[{"id":"https://openalex.org/I4210120109","display_name":"Museo Nacional de Ciencias Naturales","ror":"https://ror.org/02v6zg374","country_code":"ES","type":"archive","lineage":["https://openalex.org/I134820265","https://openalex.org/I4210120109"]},{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE","ES"],"is_corresponding":false,"raw_author_name":"Christoph Bleidorn","raw_affiliation_strings":["Department of Animal Evolution and Biodiversity, University of Goettingen, Untere Karsp\u00fcle 2, 37073, Goettingen, Germany","Museo Nacional de Ciencias Naturales, Spanish National Research Council (CSIC), 28006, Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Evolution and Biodiversity, University of Goettingen, Untere Karsp\u00fcle 2, 37073, Goettingen, Germany","institution_ids":["https://openalex.org/I74656192"]},{"raw_affiliation_string":"Museo Nacional de Ciencias Naturales, Spanish National Research Council (CSIC), 28006, Madrid, Spain","institution_ids":["https://openalex.org/I4210120109"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063493591","display_name":"Sagi Snir","orcid":"https://orcid.org/0000-0001-5833-7659"},"institutions":[{"id":"https://openalex.org/I91203450","display_name":"University of Haifa","ror":"https://ror.org/02f009v59","country_code":"IL","type":"education","lineage":["https://openalex.org/I91203450"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Sagi Snir","raw_affiliation_strings":["Institute of Evolution, Department of Evolutionary and Environmental Biology, University of Haifa, 199 Aba Khoushy Ave. Mount Carmel, Haifa, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Evolution, Department of Evolutionary and Environmental Biology, University of Haifa, 199 Aba Khoushy Ave. Mount Carmel, Haifa, Israel","institution_ids":["https://openalex.org/I91203450"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024220352","display_name":"Burkhard Morgenstern","orcid":"https://orcid.org/0000-0002-7431-2862"},"institutions":[{"id":"https://openalex.org/I74656192","display_name":"University of G\u00f6ttingen","ror":"https://ror.org/01y9bpm73","country_code":"DE","type":"education","lineage":["https://openalex.org/I74656192"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Burkhard Morgenstern","raw_affiliation_strings":["Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany","Goettingen Center of Molecular Biosciences (GZMB), Justus-von-Liebig-Weg 11, 37077, Goettingen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Microbiology and Genetics, University of Goettingen, Goldschmidtstr. 1, 37077, Goettingen, Germany","institution_ids":["https://openalex.org/I74656192"]},{"raw_affiliation_string":"Goettingen Center of Molecular Biosciences (GZMB), Justus-von-Liebig-Weg 11, 37077, Goettingen, Germany","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5024220352"],"corresponding_institution_ids":["https://openalex.org/I74656192"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"227","last_page":"241"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/substring","display_name":"Substring","score":0.7650818824768066},{"id":"https://openalex.org/keywords/word","display_name":"Word (group theory)","score":0.7141199111938477},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.6983209848403931},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6408088207244873},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5626285076141357},{"id":"https://openalex.org/keywords/maximum-likelihood","display_name":"Maximum likelihood","score":0.5407249331474304},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.518328070640564},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5037781596183777},{"id":"https://openalex.org/keywords/maximum-parsimony","display_name":"Maximum parsimony","score":0.4513777494430542},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.4490269124507904},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40416866540908813},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3846597671508789},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.27464669942855835},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.25957316160202026},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.17227110266685486},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11220967769622803}],"concepts":[{"id":"https://openalex.org/C182407805","wikidata":"https://www.wikidata.org/wiki/Q2626534","display_name":"Substring","level":3,"score":0.7650818824768066},{"id":"https://openalex.org/C90805587","wikidata":"https://www.wikidata.org/wiki/Q10944557","display_name":"Word (group theory)","level":2,"score":0.7141199111938477},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.6983209848403931},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6408088207244873},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5626285076141357},{"id":"https://openalex.org/C49781872","wikidata":"https://www.wikidata.org/wiki/Q1045555","display_name":"Maximum likelihood","level":2,"score":0.5407249331474304},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.518328070640564},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5037781596183777},{"id":"https://openalex.org/C22799545","wikidata":"https://www.wikidata.org/wiki/Q1805805","display_name":"Maximum parsimony","level":5,"score":0.4513777494430542},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.4490269124507904},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40416866540908813},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3846597671508789},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.27464669942855835},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.25957316160202026},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.17227110266685486},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11220967769622803},{"id":"https://openalex.org/C44465124","wikidata":"https://www.wikidata.org/wiki/Q713623","display_name":"Clade","level":4,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-3-030-00834-5_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-3-030-00834-5_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:publications.goettingen-research-online.de:2/134810","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/134810","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":{"id":"pmh:oai:publications.goettingen-research-online.de:2/134810","is_oa":true,"landing_page_url":"https://resolver.sub.uni-goettingen.de/purl?gro-2/134810","pdf_url":null,"source":{"id":"https://openalex.org/S4306401634","display_name":"GoeScholar  The Publication Server of the Georg-August-Universit\u00e4t G\u00f6ttingen (Georg-August-Universit\u00e4t G\u00f6ttingen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210122495","host_organization_name":"Asklepios Klinik St. Georg","host_organization_lineage":["https://openalex.org/I4210122495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/bookPart"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1498708571","https://openalex.org/W1819816431","https://openalex.org/W1971239653","https://openalex.org/W1975775747","https://openalex.org/W1988827980","https://openalex.org/W2004116552","https://openalex.org/W2006075770","https://openalex.org/W2014087252","https://openalex.org/W2048306783","https://openalex.org/W2060425093","https://openalex.org/W2074744620","https://openalex.org/W2075503802","https://openalex.org/W2083213362","https://openalex.org/W2089052086","https://openalex.org/W2090493969","https://openalex.org/W2094669477","https://openalex.org/W2094890728","https://openalex.org/W2099272153","https://openalex.org/W2100874222","https://openalex.org/W2102424972","https://openalex.org/W2109616780","https://openalex.org/W2113075998","https://openalex.org/W2114013334","https://openalex.org/W2120771433","https://openalex.org/W2124626190","https://openalex.org/W2127322768","https://openalex.org/W2138486754","https://openalex.org/W2141052558","https://openalex.org/W2141865968","https://openalex.org/W2149792928","https://openalex.org/W2164786886","https://openalex.org/W2315781448","https://openalex.org/W2336925273","https://openalex.org/W2339926834","https://openalex.org/W2468251096","https://openalex.org/W2468915207","https://openalex.org/W2507619284","https://openalex.org/W2562591850","https://openalex.org/W2568830712","https://openalex.org/W2588746379","https://openalex.org/W2623355312","https://openalex.org/W2726669970","https://openalex.org/W2761430568","https://openalex.org/W2775498959","https://openalex.org/W2790073126","https://openalex.org/W2798426299","https://openalex.org/W2799170772","https://openalex.org/W2962720177","https://openalex.org/W2963607348","https://openalex.org/W4250164480","https://openalex.org/W4254717640"],"related_works":["https://openalex.org/W4244797807","https://openalex.org/W2036614038","https://openalex.org/W4255917406","https://openalex.org/W29503807","https://openalex.org/W2784933348","https://openalex.org/W59063177","https://openalex.org/W2090308851","https://openalex.org/W2022921179","https://openalex.org/W3136938868","https://openalex.org/W2108911240"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
