{"id":"https://openalex.org/W2248270393","doi":"https://doi.org/10.1007/978-1-4471-5298-9_4","title":"Duplication, Rearrangement and Reconciliation: A Follow-Up 13 Years Later","display_name":"Duplication, Rearrangement and Reconciliation: A Follow-Up 13 Years Later","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2248270393","doi":"https://doi.org/10.1007/978-1-4471-5298-9_4","mag":"2248270393"},"language":"en","primary_location":{"id":"doi:10.1007/978-1-4471-5298-9_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4471-5298-9_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063811688","display_name":"C\u00e9dric Chauve","orcid":"https://orcid.org/0000-0001-9837-1878"},"institutions":[{"id":"https://openalex.org/I15057530","display_name":"Universit\u00e9 de Bordeaux","ror":"https://ror.org/057qpr032","country_code":"FR","type":"education","lineage":["https://openalex.org/I15057530"]},{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]},{"id":"https://openalex.org/I4210142254","display_name":"Laboratoire Bordelais de Recherche en Informatique","ror":"https://ror.org/03adqg323","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210159245","https://openalex.org/I4210160189"]},{"id":"https://openalex.org/I4210160189","display_name":"Institut Polytechnique de Bordeaux","ror":"https://ror.org/054qv7y42","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210160189"]}],"countries":["CA","FR"],"is_corresponding":true,"raw_author_name":"Cedric Chauve","raw_affiliation_strings":["Department of Mathematics, Simon Fraser University, Burnaby, BC, Canada","Department of Mathematics, Simon Fraser University, Burnaby, British Columbia, Canada","LaBRI, Universit\u00e9 Bordeaux I, Talence, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, Simon Fraser University, Burnaby, BC, Canada","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"Department of Mathematics, Simon Fraser University, Burnaby, British Columbia, Canada","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"LaBRI, Universit\u00e9 Bordeaux I, Talence, France","institution_ids":["https://openalex.org/I15057530","https://openalex.org/I4210142254","https://openalex.org/I4210160189"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041470344","display_name":"Nadia El-Mabrouk","orcid":"https://orcid.org/0000-0002-5385-1015"},"institutions":[{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nadia El-Mabrouk","raw_affiliation_strings":["Computer Science and Operations Research, University of Montreal, Montreal, Qu\u00e9bec, Canada","DIRO, Universit\u00e9 de Montr\u00e9al, Montr\u00e9al, QC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Operations Research, University of Montreal, Montreal, Qu\u00e9bec, Canada","institution_ids":["https://openalex.org/I70931966"]},{"raw_affiliation_string":"DIRO, Universit\u00e9 de Montr\u00e9al, Montr\u00e9al, QC, Canada","institution_ids":["https://openalex.org/I70931966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079476145","display_name":"Laurent Gu\u00e9guen","orcid":"https://orcid.org/0000-0001-7838-791X"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Laurent Gu\u00e9guen","raw_affiliation_strings":["LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I4210135640"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018208511","display_name":"Magali Semeria","orcid":null},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Magali Semeria","raw_affiliation_strings":["LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I4210135640"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026210731","display_name":"\u00c9ric Tannier","orcid":"https://orcid.org/0000-0002-3681-7536"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en sciences et technologies du num\u00e9rique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"government","lineage":["https://openalex.org/I1326498283"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Eric Tannier","raw_affiliation_strings":["Biometry and Evolutionary Biology, INRIA Rh\u00f4ne-Alpes, University of Lyon, Villeurbanne, France","INRIA, Rh\u00f4ne-Alpes, France","LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biometry and Evolutionary Biology, INRIA Rh\u00f4ne-Alpes, University of Lyon, Villeurbanne, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I4210135640"]},{"raw_affiliation_string":"INRIA, Rh\u00f4ne-Alpes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"LBBE, Universit\u00e9 Lyon I Claude Bernard, Lyon, France","institution_ids":["https://openalex.org/I100532134","https://openalex.org/I4210135640"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5063811688"],"corresponding_institution_ids":["https://openalex.org/I15057530","https://openalex.org/I18014758","https://openalex.org/I4210142254","https://openalex.org/I4210160189"],"apc_list":null,"apc_paid":null,"fwci":9.8148,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.97903014,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"47","last_page":"62"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.865528404712677},{"id":"https://openalex.org/keywords/synteny","display_name":"Synteny","score":0.8249562978744507},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.654024064540863},{"id":"https://openalex.org/keywords/indel","display_name":"Indel","score":0.6251958608627319},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5836692452430725},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5654439926147461},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4831785261631012},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.4612210690975189},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40187209844589233},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3865094780921936},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.11398935317993164}],"concepts":[{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.865528404712677},{"id":"https://openalex.org/C53702515","wikidata":"https://www.wikidata.org/wiki/Q971246","display_name":"Synteny","level":4,"score":0.8249562978744507},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.654024064540863},{"id":"https://openalex.org/C119054055","wikidata":"https://www.wikidata.org/wiki/Q1576681","display_name":"Indel","level":5,"score":0.6251958608627319},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5836692452430725},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5654439926147461},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4831785261631012},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.4612210690975189},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40187209844589233},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3865094780921936},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.11398935317993164},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-1-4471-5298-9_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4471-5298-9_4","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":88,"referenced_works":["https://openalex.org/W74509308","https://openalex.org/W206494857","https://openalex.org/W585830581","https://openalex.org/W602132365","https://openalex.org/W1771668628","https://openalex.org/W1918663757","https://openalex.org/W1958274537","https://openalex.org/W1963627601","https://openalex.org/W1968904197","https://openalex.org/W1972157500","https://openalex.org/W1986009232","https://openalex.org/W1992140809","https://openalex.org/W1993715180","https://openalex.org/W2008289995","https://openalex.org/W2009570821","https://openalex.org/W2021416330","https://openalex.org/W2025268107","https://openalex.org/W2029282790","https://openalex.org/W2044281191","https://openalex.org/W2046039468","https://openalex.org/W2065375138","https://openalex.org/W2079438607","https://openalex.org/W2080153599","https://openalex.org/W2086397813","https://openalex.org/W2090619251","https://openalex.org/W2092120709","https://openalex.org/W2093342565","https://openalex.org/W2096466922","https://openalex.org/W2100668314","https://openalex.org/W2102813451","https://openalex.org/W2103122162","https://openalex.org/W2107320771","https://openalex.org/W2109363750","https://openalex.org/W2111211467","https://openalex.org/W2112537533","https://openalex.org/W2113127959","https://openalex.org/W2113234327","https://openalex.org/W2113317197","https://openalex.org/W2116245614","https://openalex.org/W2116565399","https://openalex.org/W2117980752","https://openalex.org/W2118127427","https://openalex.org/W2119900532","https://openalex.org/W2122903088","https://openalex.org/W2125029076","https://openalex.org/W2130640131","https://openalex.org/W2130849966","https://openalex.org/W2131148812","https://openalex.org/W2132023322","https://openalex.org/W2133880039","https://openalex.org/W2135281627","https://openalex.org/W2138113680","https://openalex.org/W2139231345","https://openalex.org/W2139909337","https://openalex.org/W2140810179","https://openalex.org/W2144345157","https://openalex.org/W2144653577","https://openalex.org/W2145772946","https://openalex.org/W2146844850","https://openalex.org/W2151070329","https://openalex.org/W2151229046","https://openalex.org/W2157312689","https://openalex.org/W2157360426","https://openalex.org/W2158683533","https://openalex.org/W2159070430","https://openalex.org/W2160388718","https://openalex.org/W2161481677","https://openalex.org/W2163293625","https://openalex.org/W2165284025","https://openalex.org/W2165308125","https://openalex.org/W2166106146","https://openalex.org/W2167762021","https://openalex.org/W2169283658","https://openalex.org/W2169988969","https://openalex.org/W2171500866","https://openalex.org/W2179092700","https://openalex.org/W2180288160","https://openalex.org/W2369729543","https://openalex.org/W2430030760","https://openalex.org/W2775548375","https://openalex.org/W3030281598","https://openalex.org/W3154566661","https://openalex.org/W4213205621","https://openalex.org/W4230547894","https://openalex.org/W4231886136","https://openalex.org/W4233815609","https://openalex.org/W4245668478","https://openalex.org/W7037705605"],"related_works":["https://openalex.org/W2131180151","https://openalex.org/W2052299339","https://openalex.org/W2037172645","https://openalex.org/W4243565069","https://openalex.org/W2106726141","https://openalex.org/W4240983354","https://openalex.org/W2969666262","https://openalex.org/W2119233950","https://openalex.org/W2063604741","https://openalex.org/W2008983225"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":4},{"year":2013,"cited_by_count":2}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}