{"id":"https://openalex.org/W1518783375","doi":"https://doi.org/10.1007/978-1-4020-5811-0_8","title":"Ontologies in Bioinformatics and Systems Biology","display_name":"Ontologies in Bioinformatics and Systems Biology","publication_year":2007,"publication_date":"2007-09-28","ids":{"openalex":"https://openalex.org/W1518783375","doi":"https://doi.org/10.1007/978-1-4020-5811-0_8","mag":"1518783375"},"language":"en","primary_location":{"id":"doi:10.1007/978-1-4020-5811-0_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4020-5811-0_8","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078158687","display_name":"Patrick Lambrix","orcid":"https://orcid.org/0000-0002-9084-0470"},"institutions":[{"id":"https://openalex.org/I102134673","display_name":"Link\u00f6ping University","ror":"https://ror.org/05ynxx418","country_code":"SE","type":"education","lineage":["https://openalex.org/I102134673"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Patrick Lambrix","raw_affiliation_strings":["Department of Computer and Information Science, Link\u00f6pings universitet, Sweden","Dept. of Computer and Information Science, Link\u00f6pings universitet, Sweden"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Information Science, Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]},{"raw_affiliation_string":"Dept. of Computer and Information Science, Link\u00f6pings universitet, Sweden","institution_ids":["https://openalex.org/I102134673"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5078158687"],"corresponding_institution_ids":["https://openalex.org/I102134673"],"apc_list":null,"apc_paid":null,"fwci":4.3883,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.93950851,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"129","last_page":"145"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rotation-formalisms-in-three-dimensions","display_name":"Rotation formalisms in three dimensions","score":0.8205000758171082},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7813650369644165},{"id":"https://openalex.org/keywords/idef5","display_name":"IDEF5","score":0.7231875061988831},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.7039433717727661},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.6721745133399963},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6269910931587219},{"id":"https://openalex.org/keywords/ontology-components","display_name":"Ontology components","score":0.6028642058372498},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.47014620900154114},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.43095892667770386},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.42094939947128296},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40270495414733887},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34108805656433105},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2940613329410553},{"id":"https://openalex.org/keywords/suggested-upper-merged-ontology","display_name":"Suggested Upper Merged Ontology","score":0.2187584936618805},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.13270989060401917},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.06938743591308594}],"concepts":[{"id":"https://openalex.org/C171018156","wikidata":"https://www.wikidata.org/wiki/Q7370306","display_name":"Rotation formalisms in three dimensions","level":2,"score":0.8205000758171082},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7813650369644165},{"id":"https://openalex.org/C118248724","wikidata":"https://www.wikidata.org/wiki/Q5969997","display_name":"IDEF5","level":4,"score":0.7231875061988831},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.7039433717727661},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.6721745133399963},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6269910931587219},{"id":"https://openalex.org/C154210476","wikidata":"https://www.wikidata.org/wiki/Q7095057","display_name":"Ontology components","level":5,"score":0.6028642058372498},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.47014620900154114},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.43095892667770386},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.42094939947128296},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40270495414733887},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34108805656433105},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2940613329410553},{"id":"https://openalex.org/C50971890","wikidata":"https://www.wikidata.org/wiki/Q7635093","display_name":"Suggested Upper Merged Ontology","level":4,"score":0.2187584936618805},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.13270989060401917},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.06938743591308594},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-1-4020-5811-0_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-4020-5811-0_8","pdf_url":null,"source":{"id":"https://openalex.org/S4210239436","display_name":"Computational biology","issn_l":"1568-2684","issn":["1568-2684","2662-2432"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320108","host_organization_name":"Springer Nature (Netherlands)","host_organization_lineage":["https://openalex.org/P4310320108","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature (Netherlands)","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Computational Biology","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W46723978","https://openalex.org/W97483932","https://openalex.org/W134680685","https://openalex.org/W1271259649","https://openalex.org/W1508041917","https://openalex.org/W1514949230","https://openalex.org/W1515180801","https://openalex.org/W1532012722","https://openalex.org/W1532192247","https://openalex.org/W1542417898","https://openalex.org/W1583543665","https://openalex.org/W1590030008","https://openalex.org/W1600475986","https://openalex.org/W1605533097","https://openalex.org/W1981021538","https://openalex.org/W1994458586","https://openalex.org/W2019960051","https://openalex.org/W2091631218","https://openalex.org/W2112212788","https://openalex.org/W2112479620","https://openalex.org/W2150852650","https://openalex.org/W2150908245","https://openalex.org/W2156610741","https://openalex.org/W2163332605"],"related_works":["https://openalex.org/W72173000","https://openalex.org/W1506177826","https://openalex.org/W991275336","https://openalex.org/W2726617685","https://openalex.org/W2125569773","https://openalex.org/W2398356932","https://openalex.org/W4232959661","https://openalex.org/W13910993","https://openalex.org/W174539737","https://openalex.org/W2071816903"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
