{"id":"https://openalex.org/W4396966041","doi":"https://doi.org/10.1007/978-1-0716-3989-4_9","title":"Meta-colored Compacted de Bruijn Graphs","display_name":"Meta-colored Compacted de Bruijn Graphs","publication_year":2024,"publication_date":"2024-01-01","ids":{"openalex":"https://openalex.org/W4396966041","doi":"https://doi.org/10.1007/978-1-0716-3989-4_9"},"language":"en","primary_location":{"id":"doi:10.1007/978-1-0716-3989-4_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-0716-3989-4_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://iris.unive.it/bitstream/10278/5060402/1/RECOMB2024.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010860687","display_name":"Giulio Ermanno Pibiri","orcid":"https://orcid.org/0000-0003-0724-7092"},"institutions":[{"id":"https://openalex.org/I122991210","display_name":"Istituto di Scienza e Tecnologie dell'Informazione \"Alessandro Faedo\"","ror":"https://ror.org/05kacka20","country_code":"IT","type":"facility","lineage":["https://openalex.org/I122991210","https://openalex.org/I4210155236"]},{"id":"https://openalex.org/I149461666","display_name":"Ca' Foscari University of Venice","ror":"https://ror.org/04yzxz566","country_code":"IT","type":"education","lineage":["https://openalex.org/I149461666"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Giulio Ermanno Pibiri","raw_affiliation_strings":["DAIS, Ca\u2019 Foscari University of Venice, Venice, Italy","ISTI-CNR, Pisa, Italy","DAIS, Ca' Foscari University of Venice, Venice, Italy"],"raw_orcid":"https://orcid.org/0000-0003-0724-7092","affiliations":[{"raw_affiliation_string":"DAIS, Ca\u2019 Foscari University of Venice, Venice, Italy","institution_ids":["https://openalex.org/I149461666"]},{"raw_affiliation_string":"ISTI-CNR, Pisa, Italy","institution_ids":["https://openalex.org/I122991210"]},{"raw_affiliation_string":"DAIS, Ca' Foscari University of Venice, Venice, Italy","institution_ids":["https://openalex.org/I149461666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001911878","display_name":"Jason Fan","orcid":"https://orcid.org/0000-0001-7617-4814"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason Fan","raw_affiliation_strings":["Department of Computer Science, University of Maryland, College Park, 20440, USA"],"raw_orcid":"https://orcid.org/0000-0001-7617-4814","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Maryland, College Park, 20440, USA","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014584023","display_name":"Rob Patro","orcid":"https://orcid.org/0000-0001-8463-1675"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rob Patro","raw_affiliation_strings":["Department of Computer Science, University of Maryland, College Park, 20440, USA"],"raw_orcid":"https://orcid.org/0000-0001-8463-1675","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Maryland, College Park, 20440, USA","institution_ids":["https://openalex.org/I66946132"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5010860687"],"corresponding_institution_ids":["https://openalex.org/I122991210","https://openalex.org/I149461666"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":4.0265,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.9494382,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":null,"issue":null,"first_page":"131","last_page":"146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10996","display_name":"Computational Geometry and Mesh Generation","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/1704","display_name":"Computer Graphics and Computer-Aided Design"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10996","display_name":"Computational Geometry and Mesh Generation","score":0.9778000116348267,"subfield":{"id":"https://openalex.org/subfields/1704","display_name":"Computer Graphics and Computer-Aided Design"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10374","display_name":"Advanced Graph Theory Research","score":0.9168999791145325,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9101999998092651,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.793349027633667},{"id":"https://openalex.org/keywords/de-bruijn-sequence","display_name":"De Bruijn sequence","score":0.7429085373878479},{"id":"https://openalex.org/keywords/colored","display_name":"Colored","score":0.6435734629631042},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.17572185397148132},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11844977736473083},{"id":"https://openalex.org/keywords/composite-material","display_name":"Composite material","score":0.05331882834434509},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.04707378149032593}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.793349027633667},{"id":"https://openalex.org/C170320093","wikidata":"https://www.wikidata.org/wiki/Q1953457","display_name":"De Bruijn sequence","level":2,"score":0.7429085373878479},{"id":"https://openalex.org/C2778307483","wikidata":"https://www.wikidata.org/wiki/Q5149038","display_name":"Colored","level":2,"score":0.6435734629631042},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.17572185397148132},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11844977736473083},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.05331882834434509},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.04707378149032593}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/978-1-0716-3989-4_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-1-0716-3989-4_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:iris.unive.it:10278/5060402","is_oa":true,"landing_page_url":"https://hdl.handle.net/10278/5060402","pdf_url":"https://iris.unive.it/bitstream/10278/5060402/1/RECOMB2024.pdf","source":{"id":"https://openalex.org/S4306402336","display_name":"ARCA (Universit\u00e0 Ca' Foscari Venezia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149461666","host_organization_name":"Ca' Foscari University of Venice","host_organization_lineage":["https://openalex.org/I149461666"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":{"id":"pmh:oai:iris.unive.it:10278/5060402","is_oa":true,"landing_page_url":"https://hdl.handle.net/10278/5060402","pdf_url":"https://iris.unive.it/bitstream/10278/5060402/1/RECOMB2024.pdf","source":{"id":"https://openalex.org/S4306402336","display_name":"ARCA (Universit\u00e0 Ca' Foscari Venezia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149461666","host_organization_name":"Ca' Foscari University of Venice","host_organization_lineage":["https://openalex.org/I149461666"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/conferenceObject"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2324004137","display_name":null,"funder_award_id":"R01HG009937","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3146337093","display_name":"CSR: Medium: Approximate Membership Query Data Structures in Computational Biology and Storage","funder_award_id":"1763680","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3184792579","display_name":null,"funder_award_id":"CCF-1750472","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5762167578","display_name":"CAREER: A Comprehensive and Lightweight Framework for Transcriptome Analysis","funder_award_id":"1750472","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6493806911","display_name":null,"funder_award_id":"101093026","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6608149694","display_name":null,"funder_award_id":"1840340","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6624895376","display_name":null,"funder_award_id":"DGE-1840340","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6785428991","display_name":null,"funder_award_id":"CNS-1763680","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7774246832","display_name":null,"funder_award_id":"101093026","funder_id":"https://openalex.org/F4320334322","funder_display_name":"HORIZON EUROPE Framework Programme"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334322","display_name":"HORIZON EUROPE Framework Programme","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4396966041.pdf"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1867886327","https://openalex.org/W2127901812","https://openalex.org/W2144982963","https://openalex.org/W2292193262","https://openalex.org/W2323326409","https://openalex.org/W2474973645","https://openalex.org/W2759261668","https://openalex.org/W2949087252","https://openalex.org/W2963629592","https://openalex.org/W2972870121","https://openalex.org/W2979304081","https://openalex.org/W2979522844","https://openalex.org/W2998284004","https://openalex.org/W3003180447","https://openalex.org/W3020388903","https://openalex.org/W3033322505","https://openalex.org/W3039127888","https://openalex.org/W3085875665","https://openalex.org/W3101346938","https://openalex.org/W3111607156","https://openalex.org/W3112768174","https://openalex.org/W3118443291","https://openalex.org/W3168724350","https://openalex.org/W3186698701","https://openalex.org/W3212599762","https://openalex.org/W4210350794","https://openalex.org/W4225502295","https://openalex.org/W4282946044","https://openalex.org/W4362499537","https://openalex.org/W4376135137","https://openalex.org/W4376618645","https://openalex.org/W4381046832","https://openalex.org/W4382632370"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W3198016531","https://openalex.org/W127787461","https://openalex.org/W2039773446","https://openalex.org/W1998517951","https://openalex.org/W2397939707","https://openalex.org/W2126473010","https://openalex.org/W2382005989","https://openalex.org/W2893091540"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
