{"id":"https://openalex.org/W1515555735","doi":"https://doi.org/10.1007/978-0-387-48531-7_5","title":"Ontology-Based Data Integration For Biomedical Research","display_name":"Ontology-Based Data Integration For Biomedical Research","publication_year":2007,"publication_date":"2007-01-01","ids":{"openalex":"https://openalex.org/W1515555735","doi":"https://doi.org/10.1007/978-0-387-48531-7_5","mag":"1515555735"},"language":"en","primary_location":{"id":"doi:10.1007/978-0-387-48531-7_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-48531-7_5","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Semantic Web","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103560021","display_name":"Vipul Kashyap","orcid":"https://orcid.org/0000-0002-8001-7261"},"institutions":[{"id":"https://openalex.org/I48633490","display_name":"Mass General Brigham","ror":"https://ror.org/04py2rh25","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I48633490"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Vipul Kashyap","raw_affiliation_strings":["Partners Healthcare System, Clinical Informatics R&D, 93 Worcester St, Suite 201,Welleley, MA, USA"],"affiliations":[{"raw_affiliation_string":"Partners Healthcare System, Clinical Informatics R&D, 93 Worcester St, Suite 201,Welleley, MA, USA","institution_ids":["https://openalex.org/I48633490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110209950","display_name":"Kei\u2010Hoi Cheung","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kei-Hoi Cheung","raw_affiliation_strings":["Yale Center for Medical Informatics, Yale University School of Medicine, 300 George Street, Suite 501,New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Yale Center for Medical Informatics, Yale University School of Medicine, 300 George Street, Suite 501,New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053818945","display_name":"Donald Doherty","orcid":"https://orcid.org/0000-0002-4973-6225"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Donald Doherty","raw_affiliation_strings":["Brainstage Research, 5001 Baum Blvd, Suite 725,Pittsburgh, PA, USA"],"affiliations":[{"raw_affiliation_string":"Brainstage Research, 5001 Baum Blvd, Suite 725,Pittsburgh, PA, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082184364","display_name":"Matthias Samwald","orcid":"https://orcid.org/0000-0002-4855-2571"},"institutions":[{"id":"https://openalex.org/I76134821","display_name":"Medical University of Vienna","ror":"https://ror.org/05n3x4p02","country_code":"AT","type":"education","lineage":["https://openalex.org/I76134821"]}],"countries":["AT"],"is_corresponding":false,"raw_author_name":"Matthias Samwald","raw_affiliation_strings":["Medical Expert and Knowledge Based Systems, Medical University of Vienna, Spitalgasse 23 A-1090, Vienna, Austria"],"affiliations":[{"raw_affiliation_string":"Medical Expert and Knowledge Based Systems, Medical University of Vienna, Spitalgasse 23 A-1090, Vienna, Austria","institution_ids":["https://openalex.org/I76134821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075308601","display_name":"Michael S. Marshall","orcid":"https://orcid.org/0000-0002-5742-2031"},"institutions":[{"id":"https://openalex.org/I887064364","display_name":"University of Amsterdam","ror":"https://ror.org/04dkp9463","country_code":"NL","type":"education","lineage":["https://openalex.org/I887064364"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"M. Scott Marshall","raw_affiliation_strings":["University of Amsterdam, Kruislaan 403, 1098 SJ, Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"University of Amsterdam, Kruislaan 403, 1098 SJ, Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I887064364"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109267718","display_name":"Joanne Luciano","orcid":null},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joanne Luciano","raw_affiliation_strings":["Department of Genetics, Harvard Medical School, NRB Room 238, 77 Louis Pasteur Ave, Boston"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, Harvard Medical School, NRB Room 238, 77 Louis Pasteur Ave, Boston","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084721167","display_name":"Susie Stephens","orcid":null},"institutions":[{"id":"https://openalex.org/I1342911587","display_name":"Oracle (United States)","ror":"https://ror.org/006c77m33","country_code":"US","type":"company","lineage":["https://openalex.org/I1342911587"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susie Stephens","raw_affiliation_strings":["Oracle Corporation 10 Van de Graaf Drive, Burlington, MA, USA"],"affiliations":[{"raw_affiliation_string":"Oracle Corporation 10 Van de Graaf Drive, Burlington, MA, USA","institution_ids":["https://openalex.org/I1342911587"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091459619","display_name":"Iv\u00e1n Herman","orcid":"https://orcid.org/0000-0003-0782-2704"},"institutions":[{"id":"https://openalex.org/I1341640284","display_name":"Centrum Wiskunde & Informatica","ror":"https://ror.org/00x7ekv49","country_code":"NL","type":"facility","lineage":["https://openalex.org/I1341640284","https://openalex.org/I2800991832"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Ivan Herman","raw_affiliation_strings":["World Wide Web Consortium (W3C), c/o Centrum voor Wiskunde en Informatica, Kruislaan 413, 1098 SJ, Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"World Wide Web Consortium (W3C), c/o Centrum voor Wiskunde en Informatica, Kruislaan 413, 1098 SJ, Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I1341640284"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083903486","display_name":"R. Hookway","orcid":null},"institutions":[{"id":"https://openalex.org/I1324840837","display_name":"Hewlett-Packard (United States)","ror":"https://ror.org/059rn9488","country_code":"US","type":"company","lineage":["https://openalex.org/I1324840837"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Raymond Hookway","raw_affiliation_strings":["Hewlett Packard Marlborough, USA"],"affiliations":[{"raw_affiliation_string":"Hewlett Packard Marlborough, USA","institution_ids":["https://openalex.org/I1324840837"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5103560021"],"corresponding_institution_ids":["https://openalex.org/I48633490"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.11000528,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"97","last_page":"122"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7434378266334534},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5155863165855408},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.45868778228759766},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42793408036231995},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.42526325583457947},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.23005816340446472},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.07174134254455566},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.0650327205657959}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7434378266334534},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5155863165855408},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.45868778228759766},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42793408036231995},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.42526325583457947},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.23005816340446472},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.07174134254455566},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0650327205657959}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-0-387-48531-7_5","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-48531-7_5","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"The Semantic Web","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":12,"referenced_works":["https://openalex.org/W100823123","https://openalex.org/W122706658","https://openalex.org/W1526333779","https://openalex.org/W1530162484","https://openalex.org/W1840032143","https://openalex.org/W2031752570","https://openalex.org/W2075481535","https://openalex.org/W2078591625","https://openalex.org/W2117778415","https://openalex.org/W2137999759","https://openalex.org/W2257876130","https://openalex.org/W4388134939"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2126703991","https://openalex.org/W2610897791","https://openalex.org/W4366463707"],"abstract_inverted_index":null,"counts_by_year":[{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-01-15T23:16:33.117629","created_date":"2025-10-10T00:00:00"}
