{"id":"https://openalex.org/W2792846204","doi":"https://doi.org/10.1007/978-0-387-09766-4_466","title":"Systems Biology, Network Inference in","display_name":"Systems Biology, Network Inference in","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W2792846204","doi":"https://doi.org/10.1007/978-0-387-09766-4_466","mag":"2792846204"},"language":"en","primary_location":{"id":"doi:10.1007/978-0-387-09766-4_466","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-09766-4_466","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Parallel Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075517045","display_name":"Jack Dongarra","orcid":"https://orcid.org/0000-0003-3247-1782"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jack Dongarra","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029796260","display_name":"Piotr Luszczek","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Piotr Luszczek","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018089961","display_name":"Felix Wolf","orcid":"https://orcid.org/0000-0001-6595-3599"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Felix Wolf","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064279948","display_name":"Jesper Larsson Tr\u00e4ff","orcid":"https://orcid.org/0000-0002-4864-9226"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jesper Larsson Tr\u00e4ff","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038116125","display_name":"Patrice Quinton","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Patrice Quinton","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054727932","display_name":"Hermann Hellwagner","orcid":"https://orcid.org/0000-0003-1114-2584"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hermann Hellwagner","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031430778","display_name":"Martin Fr\u00e4nzle","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Martin Fr\u00e4nzle","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001151726","display_name":"Christian Lengauer","orcid":"https://orcid.org/0000-0002-2717-3417"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christian Lengauer","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081914923","display_name":"Lu\u00eds Ceze","orcid":"https://orcid.org/0000-0002-1377-6217"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Luis H Ceze","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078234916","display_name":"Kei Hiraki","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kei Hiraki","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033812568","display_name":"Rolf Riesen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Rolf Riesen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052975541","display_name":"Arthur B. Maccabe","orcid":"https://orcid.org/0000-0002-8041-2800"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Arthur B. Maccabe","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057593011","display_name":"John Feo","orcid":"https://orcid.org/0000-0001-6546-8948"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John Feo","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057403059","display_name":"Kamesh Madduri","orcid":"https://orcid.org/0000-0003-4344-0957"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kamesh Madduri","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030795088","display_name":"Tanguy Risset","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tanguy Risset","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108134444","display_name":"M. Ijaz Khan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Maleq Khan","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101673409","display_name":"Vijay Kumar","orcid":"https://orcid.org/0000-0002-2996-7181"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"V. S. Anil Kumar","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066125534","display_name":"Madha V. Marathe","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Madha V. Marathe","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075050367","display_name":"Paula E. Stretz","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Paula E. Stretz","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013232946","display_name":"Sandhya Dwarkadas","orcid":"https://orcid.org/0000-0003-2631-8191"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sandhya Dwarkadas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051465480","display_name":"Laxmikant V. Kal\u00e9","orcid":"https://orcid.org/0000-0001-9673-8445"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Laxmikant V. Kal\u00e9","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007184545","display_name":"Edgar Solomonik","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Edgar Solomonik","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039371456","display_name":"Michael B\u00e4der","orcid":"https://orcid.org/0000-0003-4780-4164"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Bader","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068403289","display_name":"Hans\u2010Joachim Bungartz","orcid":"https://orcid.org/0000-0002-0171-0712"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hans-Joachim Bungartz","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113995384","display_name":"Miriam Mehl","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Miriam Mehl","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067705772","display_name":"Thomas Huckle","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Thomas Huckle","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029610335","display_name":"Matous Sedlacek","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Matous Sedlacek","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076610730","display_name":"David A. Bader","orcid":"https://orcid.org/0000-0002-7380-5876"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David A Bader","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021246501","display_name":"Guojing Cong","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guojing Cong","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101620143","display_name":"Anshul Gupta","orcid":"https://orcid.org/0000-0003-0408-4072"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Anshul Gupta","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108339675","display_name":"Matthias M\u00fcller","orcid":"https://orcid.org/0009-0005-8772-7775"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Matthias M\u00fcller","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061416620","display_name":"Brian Whitney","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Brian Whitney","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007822092","display_name":"Robert Henschel","orcid":"https://orcid.org/0000-0003-2289-9398"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Robert Henschel","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091590632","display_name":"Kalyan Kumaran","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kalyan Kumaran","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055909708","display_name":"Josep Torrellas","orcid":"https://orcid.org/0000-0003-2595-5228"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Josep Torrellas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056736926","display_name":"Lawrence Rauchwerger","orcid":"https://orcid.org/0000-0002-1545-4991"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lawrence Rauchwerger","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063181993","display_name":"Eric Polizzi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eric Polizzi","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076407181","display_name":"Markus P\u00fcschel","orcid":"https://orcid.org/0000-0001-8834-8551"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Markus P\u00fcschel","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015446965","display_name":"Franz Franchetti","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Franz Franchetti","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077820779","display_name":"Yevgen Voronenko","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yevgen Voronenko","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001944349","display_name":"Frederica Darema","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Frederica Darema","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078145335","display_name":"Ryan Newton","orcid":"https://orcid.org/0000-0003-3934-9165"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ryan Newton","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113993134","display_name":"Amol Ghoting","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Amol Ghoting","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033681881","display_name":"Konstantin Makarychev","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Konstantin Makarychev","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006873445","display_name":"Xiaoye Sherry Li","orcid":"https://orcid.org/0000-0002-0747-698X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaoye Sherry Li","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076825233","display_name":"James Demmel","orcid":"https://orcid.org/0000-0003-1145-3745"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"James Demmel","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071871579","display_name":"John Gilbert","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John Gilbert","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040521001","display_name":"Laura Grigori","orcid":"https://orcid.org/0000-0002-5880-1076"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Laura Grigori","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047489767","display_name":"Meiyue Shao","orcid":"https://orcid.org/0000-0002-4914-7666"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Meiyue Shao","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030554885","display_name":"Wen mei Hwu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wen mei Hwu","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076610730","display_name":"David A. Bader","orcid":"https://orcid.org/0000-0002-7380-5876"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David A. Bader","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021246501","display_name":"Guojing Cong","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guojing Cong","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037945420","display_name":"Jos\u00e9 Flich","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jos\u00e9 Flich","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111855694","display_name":"Sudhakar Yalamanchili","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sudhakar Yalamanchili","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079254515","display_name":"Michael L. Scott","orcid":"https://orcid.org/0000-0001-8652-7644"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael L. Scott","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045837332","display_name":"Jaroslaw Zola","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jaroslaw Zola","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070958522","display_name":"Srinivas Aluru","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Srinivas Aluru","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070958522","display_name":"Srinivas Aluru","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Srinivas Aluru","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5085738593","display_name":"James Reinders","orcid":"https://orcid.org/0000-0002-4219-7273"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"James R. Reinders","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":59,"corresponding_author_ids":["https://openalex.org/A5076610730"],"corresponding_institution_ids":["https://openalex.org/I157725225"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.25965577,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1997","last_page":"2002"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9437000155448914,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9437000155448914,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9210000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.604000449180603},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4532346725463867},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41292983293533325},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40031659603118896},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3395448327064514},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.23765212297439575}],"concepts":[{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.604000449180603},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4532346725463867},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41292983293533325},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40031659603118896},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3395448327064514},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.23765212297439575}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-0-387-09766-4_466","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-09766-4_466","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Parallel Computing","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2061542922"],"abstract_inverted_index":null,"counts_by_year":[{"year":2016,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
