{"id":"https://openalex.org/W4242835615","doi":"https://doi.org/10.1007/978-0-387-09766-4_2086","title":"NAnoscale Molecular Dynamics (NAMD)","display_name":"NAnoscale Molecular Dynamics (NAMD)","publication_year":2011,"publication_date":"2011-01-01","ids":{"openalex":"https://openalex.org/W4242835615","doi":"https://doi.org/10.1007/978-0-387-09766-4_2086"},"language":"en","primary_location":{"id":"doi:10.1007/978-0-387-09766-4_2086","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-09766-4_2086","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Parallel Computing","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5051465480","display_name":"Laxmikant V. Kal\u00e9","orcid":"https://orcid.org/0000-0001-9673-8445"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Laxmikant V. Kal\u00e9","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081506338","display_name":"Abhinav Bhatel\u00e9","orcid":"https://orcid.org/0000-0003-3069-3701"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Abhinav Bhatele","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088710224","display_name":"Eric J. Bohm","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eric J. Bohm","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086916844","display_name":"J. C. Phillips","orcid":"https://orcid.org/0000-0002-3812-9665"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"James C. Phillips","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081580336","display_name":"David H. Bailey","orcid":"https://orcid.org/0000-0002-7574-8342"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"David H. Bailey","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019202832","display_name":"Ananth Grama","orcid":"https://orcid.org/0000-0002-9378-9244"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ananth Y. Grama","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082990123","display_name":"Joseph Fogarty","orcid":"https://orcid.org/0009-0008-3374-5232"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Joseph Fogarty","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072718512","display_name":"Hasan Metin Aktulga","orcid":"https://orcid.org/0000-0003-3061-6378"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hasan Aktulga","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036075015","display_name":"Sagar Pandit","orcid":"https://orcid.org/0000-0001-7126-9144"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sagar Pandit","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109071293","display_name":"David Padua","orcid":null},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David Padua","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054271461","display_name":"Hiroshi Takahara","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hiroshi Takahara","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033930662","display_name":"Guy E. Blelloch","orcid":"https://orcid.org/0000-0003-0224-9187"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Guy Blelloch","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044270964","display_name":"Robert Latham","orcid":"https://orcid.org/0000-0002-5285-6375"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Robert Latham","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014251134","display_name":"Holger Fr\u00f6ning","orcid":"https://orcid.org/0000-0001-9562-0680"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Holger Fr\u00f6ning","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064197925","display_name":"Kieran T. Herley","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kieran T. Herley","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109071293","display_name":"David Padua","orcid":null},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"David Padua","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Urbana, IL, USA"],"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Urbana, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000542963","display_name":"Olav Lysne","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Olav Lysne","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087349849","display_name":"Frank Olaf Sem-Jacobsen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Frank\u00a0Olaf Sem-Jacobsen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":null,"display_name":"Mar\u0131\u0301a Engracia G\u00f3mez Requena","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Mar\u0131\u0301a Engracia G\u00f3mez Requena","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000542963","display_name":"Olav Lysne","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Olav Lysne","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087349849","display_name":"Frank Olaf Sem-Jacobsen","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Frank Olaf Sem-Jacobsen","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022630655","display_name":"Danny Hendler","orcid":"https://orcid.org/0000-0001-7152-7828"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Danny Hendler","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067785830","display_name":"Alessandro Bardine","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Alessandro Bardine","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012539583","display_name":"Pierfrancesco Foglia","orcid":"https://orcid.org/0000-0001-6432-4504"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Pierfrancesco Foglia","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076149166","display_name":"Cosimo Antonio Prete","orcid":"https://orcid.org/0000-0002-8467-8198"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cosimo Antonio Prete","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017891502","display_name":"Marco Solinas","orcid":"https://orcid.org/0000-0001-8694-5520"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marco Solinas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024606205","display_name":"Michael Garland","orcid":"https://orcid.org/0000-0001-6093-7602"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Garland","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037631128","display_name":"N. Govind","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"N. Govind","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056598051","display_name":"Eric J. Bylaska","orcid":"https://orcid.org/0000-0001-6405-599X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eric J. Bylaska","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034688782","display_name":"Wibe A. de Jong","orcid":"https://orcid.org/0000-0002-7114-8315"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Wibe A. Jong","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061654123","display_name":"K. Kowalski","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"K. Kowalski","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037736330","display_name":"Tjerk P. Straatsma","orcid":"https://orcid.org/0000-0002-7425-9715"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tjerk P. Straatsma","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075571602","display_name":"Marat Valiev","orcid":"https://orcid.org/0000-0001-6127-1988"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Marat Valiev","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5000964601","display_name":"H. van J. J. Dam","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"H. van J. J. Dam","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":34,"corresponding_author_ids":["https://openalex.org/A5109071293"],"corresponding_institution_ids":["https://openalex.org/I157725225"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.46477868,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1254","last_page":"1254"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.12839999794960022,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10913","display_name":"Molecular Junctions and Nanostructures","score":0.12839999794960022,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12327","display_name":"Various Chemistry Research Topics","score":0.12530000507831573,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12044","display_name":"Advanced Physical and Chemical Molecular Interactions","score":0.11990000307559967,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/nanoscopic-scale","display_name":"Nanoscopic scale","score":0.7493796348571777},{"id":"https://openalex.org/keywords/molecular-dynamics","display_name":"Molecular dynamics","score":0.4614850878715515},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.38037362694740295},{"id":"https://openalex.org/keywords/nanotechnology","display_name":"Nanotechnology","score":0.2739025950431824},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.183142751455307},{"id":"https://openalex.org/keywords/computational-chemistry","display_name":"Computational chemistry","score":0.11114969849586487}],"concepts":[{"id":"https://openalex.org/C45206210","wikidata":"https://www.wikidata.org/wiki/Q2415817","display_name":"Nanoscopic scale","level":2,"score":0.7493796348571777},{"id":"https://openalex.org/C59593255","wikidata":"https://www.wikidata.org/wiki/Q901663","display_name":"Molecular dynamics","level":2,"score":0.4614850878715515},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.38037362694740295},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.2739025950431824},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.183142751455307},{"id":"https://openalex.org/C147597530","wikidata":"https://www.wikidata.org/wiki/Q369472","display_name":"Computational chemistry","level":1,"score":0.11114969849586487}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/978-0-387-09766-4_2086","is_oa":false,"landing_page_url":"https://doi.org/10.1007/978-0-387-09766-4_2086","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Encyclopedia of Parallel Computing","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2898370298","https://openalex.org/W4292492973","https://openalex.org/W2744391499","https://openalex.org/W3120461830","https://openalex.org/W4230250635","https://openalex.org/W3041790586","https://openalex.org/W2018879842","https://openalex.org/W3144504424","https://openalex.org/W2325423348"],"abstract_inverted_index":null,"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}