{"id":"https://openalex.org/W1519675534","doi":"https://doi.org/10.1007/3-540-45995-2_9","title":"Algorithms for Local Alignment with Length Constraints*","display_name":"Algorithms for Local Alignment with Length Constraints*","publication_year":2002,"publication_date":"2002-01-01","ids":{"openalex":"https://openalex.org/W1519675534","doi":"https://doi.org/10.1007/3-540-45995-2_9","mag":"1519675534"},"language":"en","primary_location":{"id":"doi:10.1007/3-540-45995-2_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45995-2_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072963545","display_name":"Abdullah N. Arslan","orcid":"https://orcid.org/0000-0002-3979-6371"},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Abdullah N. Arslan","raw_affiliation_strings":["Department of Computer Science, University of California, 93106, anta Barbara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, 93106, anta Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026125535","display_name":"\u00d6mer E\u011feci\u0307o\u011flu","orcid":"https://orcid.org/0000-0002-6070-761X"},"institutions":[{"id":"https://openalex.org/I154570441","display_name":"University of California, Santa Barbara","ror":"https://ror.org/02t274463","country_code":"US","type":"education","lineage":["https://openalex.org/I154570441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"\u00d6mer E\u011fecio\u011flu","raw_affiliation_strings":["Department of Computer Science, University of California, 93106, anta Barbara, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California, 93106, anta Barbara, CA, USA","institution_ids":["https://openalex.org/I154570441"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.8496,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.72100534,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"38","last_page":"51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.6292263269424438},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6118801236152649},{"id":"https://openalex.org/keywords/limit","display_name":"Limit (mathematics)","score":0.5928450226783752},{"id":"https://openalex.org/keywords/integer","display_name":"Integer (computer science)","score":0.5838979482650757},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5587262511253357},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5251904726028442},{"id":"https://openalex.org/keywords/space","display_name":"Space (punctuation)","score":0.5118078589439392},{"id":"https://openalex.org/keywords/edit-distance","display_name":"Edit distance","score":0.4967857003211975},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.48065245151519775},{"id":"https://openalex.org/keywords/upper-and-lower-bounds","display_name":"Upper and lower bounds","score":0.4657835066318512},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.4350258708000183},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.3275200128555298},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.1824716031551361},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.1230296790599823}],"concepts":[{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.6292263269424438},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6118801236152649},{"id":"https://openalex.org/C151201525","wikidata":"https://www.wikidata.org/wiki/Q177239","display_name":"Limit (mathematics)","level":2,"score":0.5928450226783752},{"id":"https://openalex.org/C97137487","wikidata":"https://www.wikidata.org/wiki/Q729138","display_name":"Integer (computer science)","level":2,"score":0.5838979482650757},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5587262511253357},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5251904726028442},{"id":"https://openalex.org/C2778572836","wikidata":"https://www.wikidata.org/wiki/Q380933","display_name":"Space (punctuation)","level":2,"score":0.5118078589439392},{"id":"https://openalex.org/C44359876","wikidata":"https://www.wikidata.org/wiki/Q5338467","display_name":"Edit distance","level":2,"score":0.4967857003211975},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.48065245151519775},{"id":"https://openalex.org/C77553402","wikidata":"https://www.wikidata.org/wiki/Q13222579","display_name":"Upper and lower bounds","level":2,"score":0.4657835066318512},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.4350258708000183},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.3275200128555298},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.1824716031551361},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.1230296790599823},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/3-540-45995-2_9","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45995-2_9","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.16.6827","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.16.6827","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.ucsb.edu/~omer/DOWNLOADABLE/Latin_alignment02.ps","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":41,"referenced_works":["https://openalex.org/W3093036","https://openalex.org/W1487534524","https://openalex.org/W1496383623","https://openalex.org/W1508152977","https://openalex.org/W1589633291","https://openalex.org/W1595472131","https://openalex.org/W1600463518","https://openalex.org/W1608032220","https://openalex.org/W1974708980","https://openalex.org/W1984170742","https://openalex.org/W2004215917","https://openalex.org/W2011778465","https://openalex.org/W2015928376","https://openalex.org/W2021202955","https://openalex.org/W2031708572","https://openalex.org/W2033546932","https://openalex.org/W2041066466","https://openalex.org/W2041282483","https://openalex.org/W2043100293","https://openalex.org/W2060344461","https://openalex.org/W2064785956","https://openalex.org/W2069293198","https://openalex.org/W2073531516","https://openalex.org/W2081181483","https://openalex.org/W2087064593","https://openalex.org/W2089606669","https://openalex.org/W2094263128","https://openalex.org/W2112751084","https://openalex.org/W2120713972","https://openalex.org/W2124302819","https://openalex.org/W2131227307","https://openalex.org/W2141416885","https://openalex.org/W2158714788","https://openalex.org/W2164206608","https://openalex.org/W2294580796","https://openalex.org/W2412264086","https://openalex.org/W2611102567","https://openalex.org/W2913202392","https://openalex.org/W2987111343","https://openalex.org/W4240816438","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3044917232","https://openalex.org/W1498160656","https://openalex.org/W2119149496","https://openalex.org/W2055693471","https://openalex.org/W2139858675","https://openalex.org/W2952580779","https://openalex.org/W1537327044","https://openalex.org/W4295101776","https://openalex.org/W123129858","https://openalex.org/W4289827875"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}