{"id":"https://openalex.org/W1489268516","doi":"https://doi.org/10.1007/3-540-45727-5_13","title":"Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data","display_name":"Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data","publication_year":2001,"publication_date":"2001-01-01","ids":{"openalex":"https://openalex.org/W1489268516","doi":"https://doi.org/10.1007/3-540-45727-5_13","mag":"1489268516"},"language":"en","primary_location":{"id":"doi:10.1007/3-540-45727-5_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45727-5_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056821549","display_name":"Jacques van Helden","orcid":"https://orcid.org/0000-0002-8799-8584"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE","GB"],"is_corresponding":false,"raw_author_name":"Jacques van Helden","raw_affiliation_strings":["Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","SCMBB, Universit\u00e9 Libre de Bruxelles, CP160/16. 50 av F.D. Roosevelt, B-1050, Bruxelles, Belgique"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"SCMBB, Universit\u00e9 Libre de Bruxelles, CP160/16. 50 av F.D. Roosevelt, B-1050, Bruxelles, Belgique","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102913036","display_name":"David Gilbert","orcid":"https://orcid.org/0000-0002-8872-4294"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I180825142","display_name":"City, University of London","ror":"https://ror.org/04489at23","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I180825142"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Gilbert","raw_affiliation_strings":["Department of Computing, City University, Northampton Square, London, EC1V 0HB, UK","Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing, City University, Northampton Square, London, EC1V 0HB, UK","institution_ids":["https://openalex.org/I180825142"]},{"raw_affiliation_string":"Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064848972","display_name":"Lorenz Wernisch","orcid":"https://orcid.org/0000-0003-3113-7942"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lorenz Wernisch","raw_affiliation_strings":["Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016411406","display_name":"Michael Schroeder","orcid":"https://orcid.org/0000-0003-2848-6949"},"institutions":[{"id":"https://openalex.org/I180825142","display_name":"City, University of London","ror":"https://ror.org/04489at23","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I180825142"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Michael Schroeder","raw_affiliation_strings":["Department of Computing, City University, Northampton Square, London, EC1V 0HB, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing, City University, Northampton Square, London, EC1V 0HB, UK","institution_ids":["https://openalex.org/I180825142"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074905519","display_name":"Shoshana J. Wodak","orcid":"https://orcid.org/0000-0002-0701-6545"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE","GB"],"is_corresponding":false,"raw_author_name":"Shoshana Wodak","raw_affiliation_strings":["Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","SCMBB, Universit\u00e9 Libre de Bruxelles, CP160/16. 50 av F.D. Roosevelt, B-1050, Bruxelles, Belgique"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Genome Campus -, European Bioinformatics Institute, Hinxton, Cambridge, CB10 1SD -, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"SCMBB, Universit\u00e9 Libre de Bruxelles, CP160/16. 50 av F.D. Roosevelt, B-1050, Bruxelles, Belgique","institution_ids":["https://openalex.org/I132053463"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":6.281,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.96147768,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"147","last_page":"163"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6565799713134766},{"id":"https://openalex.org/keywords/interpretation","display_name":"Interpretation (philosophy)","score":0.6166332960128784},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.529694139957428},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5069294571876526},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4896879494190216},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3578755855560303},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35296154022216797},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.29249107837677},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2324322760105133},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1548835039138794}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6565799713134766},{"id":"https://openalex.org/C527412718","wikidata":"https://www.wikidata.org/wiki/Q855395","display_name":"Interpretation (philosophy)","level":2,"score":0.6166332960128784},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.529694139957428},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5069294571876526},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4896879494190216},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3578755855560303},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35296154022216797},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.29249107837677},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2324322760105133},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1548835039138794}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/3-540-45727-5_13","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45727-5_13","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.27.5313","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.27.5313","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.soi.city.ac.uk/~drg/publications/journals/lncs_2000_0925.ps","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.36.4130","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.36.4130","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.soi.city.ac.uk/~drg/publications/conferences/lncs_jobim2000.ps","raw_type":"text"},{"id":"pmh:oai:bura.brunel.ac.uk:2438/2998","is_oa":false,"landing_page_url":"http://bura.brunel.ac.uk/handle/2438/2998","pdf_url":null,"source":{"id":"https://openalex.org/S4306401473","display_name":"Brunel University Research Archive (BURA) (Brunel University London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I59433898","host_organization_name":"Brunel University of London","host_organization_lineage":["https://openalex.org/I59433898"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Conference Paper"},{"id":"pmh:oai:dipot.ulb.ac.be:2013/231394","is_oa":false,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/231394","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Lecture notes in computer science, 2066","raw_type":"info:ulb-repo/semantics/openurl/article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":29,"referenced_works":["https://openalex.org/W1533936090","https://openalex.org/W1549647993","https://openalex.org/W1586476557","https://openalex.org/W1967053372","https://openalex.org/W2001964005","https://openalex.org/W2032231928","https://openalex.org/W2057885377","https://openalex.org/W2063004022","https://openalex.org/W2070587756","https://openalex.org/W2072152345","https://openalex.org/W2072969249","https://openalex.org/W2103453943","https://openalex.org/W2109715166","https://openalex.org/W2115772919","https://openalex.org/W2135187880","https://openalex.org/W2142323968","https://openalex.org/W2142890842","https://openalex.org/W2146312020","https://openalex.org/W2147055980","https://openalex.org/W2150926065","https://openalex.org/W2157485293","https://openalex.org/W2159482845","https://openalex.org/W2162853466","https://openalex.org/W2165011536","https://openalex.org/W2165934569","https://openalex.org/W2915429056","https://openalex.org/W4246932843","https://openalex.org/W4252706339","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W4388853415","https://openalex.org/W4315558101","https://openalex.org/W3200271510","https://openalex.org/W63366483","https://openalex.org/W1516770101","https://openalex.org/W1897466773","https://openalex.org/W4313320911","https://openalex.org/W2357011584","https://openalex.org/W4380882399","https://openalex.org/W4327743144"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
