{"id":"https://openalex.org/W1535220465","doi":"https://doi.org/10.1007/3-540-45351-2_6","title":"Hybrid Modeling and Simulation of Biomolecular Networks","display_name":"Hybrid Modeling and Simulation of Biomolecular Networks","publication_year":2001,"publication_date":"2001-01-01","ids":{"openalex":"https://openalex.org/W1535220465","doi":"https://doi.org/10.1007/3-540-45351-2_6","mag":"1535220465"},"language":"en","primary_location":{"id":"doi:10.1007/3-540-45351-2_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45351-2_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065059795","display_name":"Rajeev Alur","orcid":"https://orcid.org/0000-0003-1733-7083"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Rajeev Alur","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086742095","display_name":"C\u0103lin Belta","orcid":"https://orcid.org/0000-0002-7141-2657"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Calin Belta","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020028377","display_name":"Franjo Ivan\u010di\u0107","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Franjo Ivan\u010di\u0107","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100346929","display_name":"Vijay Kumar","orcid":"https://orcid.org/0000-0001-6477-8274"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Vijay Kumar","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109995507","display_name":"Max Mintz","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Max Mintz","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029243115","display_name":"George J. Pappas","orcid":"https://orcid.org/0000-0001-9081-0637"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"George J. Pappas","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051987821","display_name":"Harvey Rubin","orcid":"https://orcid.org/0000-0002-2899-425X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Harvey Rubin","raw_affiliation_strings":[],"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5015126110","display_name":"Jonathan Schug","orcid":"https://orcid.org/0000-0001-6885-7869"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jonathan Schug","raw_affiliation_strings":[],"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5065059795"],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":17.775,"has_fulltext":false,"cited_by_count":198,"citation_normalized_percentile":{"value":0.99307753,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"19","last_page":"32"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7973527312278748},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.7223101258277893},{"id":"https://openalex.org/keywords/hierarchy","display_name":"Hierarchy","score":0.6197931170463562},{"id":"https://openalex.org/keywords/hybrid-system","display_name":"Hybrid system","score":0.5867800116539001},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.5322250127792358},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.44319725036621094},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.353182852268219},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.3246444761753082},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.19410330057144165},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.18044593930244446},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15391841530799866},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.15090715885162354},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1071482002735138}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7973527312278748},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.7223101258277893},{"id":"https://openalex.org/C31170391","wikidata":"https://www.wikidata.org/wiki/Q188619","display_name":"Hierarchy","level":2,"score":0.6197931170463562},{"id":"https://openalex.org/C50897621","wikidata":"https://www.wikidata.org/wiki/Q2665508","display_name":"Hybrid system","level":2,"score":0.5867800116539001},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.5322250127792358},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.44319725036621094},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.353182852268219},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.3246444761753082},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.19410330057144165},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.18044593930244446},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15391841530799866},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.15090715885162354},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1071482002735138},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C34447519","wikidata":"https://www.wikidata.org/wiki/Q179522","display_name":"Market economy","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/3-540-45351-2_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/3-540-45351-2_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.17.4491","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.17.4491","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.seas.upenn.edu/~pappasg/papers/HSCC01-BIO.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.18.9036","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.18.9036","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cis.upenn.edu/~ivancic/papers/hscc01.ps.gz","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.24.4937","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.24.4937","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.seas.upenn.edu:8080/~calin/37-paper.ps","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.29.76","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.29.76","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cis.upenn.edu/~alur/Hscc01Bio.ps.gz","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":25,"referenced_works":["https://openalex.org/W119570465","https://openalex.org/W253661631","https://openalex.org/W1562722544","https://openalex.org/W1573344143","https://openalex.org/W1623155147","https://openalex.org/W1644749979","https://openalex.org/W1645305843","https://openalex.org/W1858911608","https://openalex.org/W1891915427","https://openalex.org/W2004463571","https://openalex.org/W2056008871","https://openalex.org/W2074743596","https://openalex.org/W2099529102","https://openalex.org/W2103780237","https://openalex.org/W2118223275","https://openalex.org/W2129567019","https://openalex.org/W2138751241","https://openalex.org/W2155418451","https://openalex.org/W2158905117","https://openalex.org/W2159765281","https://openalex.org/W2176300081","https://openalex.org/W2565361214","https://openalex.org/W3144368627","https://openalex.org/W4256028956","https://openalex.org/W6683799711"],"related_works":["https://openalex.org/W2151393864","https://openalex.org/W2949927938","https://openalex.org/W2029387041","https://openalex.org/W2135896045","https://openalex.org/W1973268559","https://openalex.org/W2884256268","https://openalex.org/W2131025197","https://openalex.org/W2031892952","https://openalex.org/W3108451992","https://openalex.org/W2171763327"],"abstract_inverted_index":null,"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
