{"id":"https://openalex.org/W1500947024","doi":"https://doi.org/10.1007/11925903_34","title":"Experimental Validation of the Statistical Thermodynamic Model for Prediction of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation","display_name":"Experimental Validation of the Statistical Thermodynamic Model for Prediction of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W1500947024","doi":"https://doi.org/10.1007/11925903_34","mag":"1500947024"},"language":"en","primary_location":{"id":"doi:10.1007/11925903_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11925903_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090436899","display_name":"Ken Komiya","orcid":"https://orcid.org/0000-0001-7385-9738"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I114531698","display_name":"Tokyo Institute of Technology","ror":"https://ror.org/0112mx960","country_code":"JP","type":"education","lineage":["https://openalex.org/I114531698"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Ken Komiya","raw_affiliation_strings":["Department of Computer Science, The University of Tokyo,","Dept. of Computational Intelligence and Systems Science, Tokyo Institute of Technology,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Tokyo,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Dept. of Computational Intelligence and Systems Science, Tokyo Institute of Technology,","institution_ids":["https://openalex.org/I114531698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003577843","display_name":"Satsuki Yaegashi","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Satsuki Yaegashi","raw_affiliation_strings":["Japan Science and Technology Agency-CREST,"],"affiliations":[{"raw_affiliation_string":"Japan Science and Technology Agency-CREST,","institution_ids":["https://openalex.org/I4210086780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110590293","display_name":"Masami Hagiya","orcid":null},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Masami Hagiya","raw_affiliation_strings":["Department of Computer Science, The University of Tokyo,","Japan Science and Technology Agency-CREST,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Tokyo,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Japan Science and Technology Agency-CREST,","institution_ids":["https://openalex.org/I4210086780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113444758","display_name":"Akira Suyama","orcid":null},"institutions":[{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]},{"id":"https://openalex.org/I149964584","display_name":"Tokyo University of Pharmacy and Life Sciences","ror":"https://ror.org/057jm7w82","country_code":"JP","type":"education","lineage":["https://openalex.org/I149964584"]},{"id":"https://openalex.org/I4210111488","display_name":"Life Science Institute","ror":"https://ror.org/01yeyd808","country_code":"JP","type":"facility","lineage":["https://openalex.org/I4210111488"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Akira Suyama","raw_affiliation_strings":["Department of Life Sciences and Institute of Physics, The University of Tokyo,","Japan Science and Technology Agency-CREST,"],"affiliations":[{"raw_affiliation_string":"Department of Life Sciences and Institute of Physics, The University of Tokyo,","institution_ids":["https://openalex.org/I4210111488","https://openalex.org/I149964584"]},{"raw_affiliation_string":"Japan Science and Technology Agency-CREST,","institution_ids":["https://openalex.org/I4210086780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088074620","display_name":"John A. Rose","orcid":null},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I157921009","display_name":"Ritsumeikan Asia Pacific University","ror":"https://ror.org/03ynn1n59","country_code":"JP","type":"education","lineage":["https://openalex.org/I157921009","https://openalex.org/I4390039241"]},{"id":"https://openalex.org/I4210086780","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19","country_code":"JP","type":"government","lineage":["https://openalex.org/I4210086780"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"John A. Rose","raw_affiliation_strings":["Department of Computer Science, The University of Tokyo,","Institute of Information Communication Technology, Ritsumeikan Asia Pacific University,","Japan Science and Technology Agency-CREST,"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Tokyo,","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Institute of Information Communication Technology, Ritsumeikan Asia Pacific University,","institution_ids":["https://openalex.org/I157921009"]},{"raw_affiliation_string":"Japan Science and Technology Agency-CREST,","institution_ids":["https://openalex.org/I4210086780"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5090436899"],"corresponding_institution_ids":["https://openalex.org/I114531698","https://openalex.org/I74801974"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.4558,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.88932228,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"428","last_page":"438"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7123265266418457},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5273638367652893},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.49531999230384827},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.49531999230384827},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4621698558330536},{"id":"https://openalex.org/keywords/series","display_name":"Series (stratigraphy)","score":0.4157772362232208},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3751320242881775},{"id":"https://openalex.org/keywords/mechanical-engineering","display_name":"Mechanical engineering","score":0.09874999523162842}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7123265266418457},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5273638367652893},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.49531999230384827},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.49531999230384827},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4621698558330536},{"id":"https://openalex.org/C143724316","wikidata":"https://www.wikidata.org/wiki/Q312468","display_name":"Series (stratigraphy)","level":2,"score":0.4157772362232208},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3751320242881775},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.09874999523162842},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11925903_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11925903_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":17,"referenced_works":["https://openalex.org/W73361230","https://openalex.org/W111213550","https://openalex.org/W1514821623","https://openalex.org/W1572908028","https://openalex.org/W1680174508","https://openalex.org/W1996847161","https://openalex.org/W2031369081","https://openalex.org/W2049001845","https://openalex.org/W2054325207","https://openalex.org/W2077086564","https://openalex.org/W2089800073","https://openalex.org/W2100404753","https://openalex.org/W2110975678","https://openalex.org/W2112333437","https://openalex.org/W2122211325","https://openalex.org/W2578871038","https://openalex.org/W2999129308"],"related_works":["https://openalex.org/W1919101720","https://openalex.org/W4390822878","https://openalex.org/W96888382","https://openalex.org/W2041308758","https://openalex.org/W4386126592","https://openalex.org/W2610782116","https://openalex.org/W2951907088","https://openalex.org/W4237434372","https://openalex.org/W1976730198","https://openalex.org/W2015462925"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
