{"id":"https://openalex.org/W2143086002","doi":"https://doi.org/10.1007/11925231_113","title":"Fast Protein Structure Alignment Algorithm Based on Local Geometric Similarity","display_name":"Fast Protein Structure Alignment Algorithm Based on Local Geometric Similarity","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W2143086002","doi":"https://doi.org/10.1007/11925231_113","mag":"2143086002"},"language":"en","primary_location":{"id":"doi:10.1007/11925231_113","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11925231_113","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004607403","display_name":"Chanyong Park","orcid":"https://orcid.org/0000-0002-9359-2644"},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Chan-Yong Park","raw_affiliation_strings":["Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101863208","display_name":"Sung-Hee Park","orcid":"https://orcid.org/0000-0003-3920-6025"},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sung-Hee Park","raw_affiliation_strings":["Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100383807","display_name":"Daehee Kim","orcid":"https://orcid.org/0000-0001-9676-9604"},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Dae-Hee Kim","raw_affiliation_strings":["Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029441231","display_name":"Soo-Jun Park","orcid":null},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Soo-Jun Park","raw_affiliation_strings":["Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038798021","display_name":"Mankyu Sung","orcid":"https://orcid.org/0000-0001-5807-6719"},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Man-Kyu Sung","raw_affiliation_strings":["Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Electronics and Telecommunications Research Institute, 161 Gajung, Yusung, Daejeon, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091831911","display_name":"Hong\u2010Ro Lee","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hong-Ro Lee","raw_affiliation_strings":["Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012039044","display_name":"Jungsub Shin","orcid":"https://orcid.org/0000-0001-8573-1168"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jung-Sub Shin","raw_affiliation_strings":["Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111990184","display_name":"Chi-Jung Hwang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chi-Jung Hwang","raw_affiliation_strings":["Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, Chung Nam University (CNU), Daejon, Korea","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1179","last_page":"1189"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7331446409225464},{"id":"https://openalex.org/keywords/backtracking","display_name":"Backtracking","score":0.7187310457229614},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.6337959170341492},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.5722907185554504},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5548329949378967},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5515682697296143},{"id":"https://openalex.org/keywords/closeness","display_name":"Closeness","score":0.5423754453659058},{"id":"https://openalex.org/keywords/substructure","display_name":"Substructure","score":0.528076171875},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.511118471622467},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.45885685086250305},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.4485085904598236},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4332191050052643},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.42134302854537964},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.38710981607437134},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.34975481033325195},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22397735714912415},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18101704120635986},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.07928380370140076}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7331446409225464},{"id":"https://openalex.org/C156884757","wikidata":"https://www.wikidata.org/wiki/Q798554","display_name":"Backtracking","level":2,"score":0.7187310457229614},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.6337959170341492},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.5722907185554504},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5548329949378967},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5515682697296143},{"id":"https://openalex.org/C2779545769","wikidata":"https://www.wikidata.org/wiki/Q5135364","display_name":"Closeness","level":2,"score":0.5423754453659058},{"id":"https://openalex.org/C99679407","wikidata":"https://www.wikidata.org/wiki/Q56761637","display_name":"Substructure","level":2,"score":0.528076171875},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.511118471622467},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.45885685086250305},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.4485085904598236},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4332191050052643},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.42134302854537964},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.38710981607437134},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.34975481033325195},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22397735714912415},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18101704120635986},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.07928380370140076},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11925231_113","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11925231_113","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1520321564","https://openalex.org/W1905708630","https://openalex.org/W1965907701","https://openalex.org/W1979147581","https://openalex.org/W1986019599","https://openalex.org/W2022058405","https://openalex.org/W2044595627","https://openalex.org/W2094794667","https://openalex.org/W2095855913","https://openalex.org/W2152326664","https://openalex.org/W2154204736","https://openalex.org/W2168546474","https://openalex.org/W2174594003","https://openalex.org/W2295268496","https://openalex.org/W2477521491"],"related_works":["https://openalex.org/W2103737249","https://openalex.org/W2051969447","https://openalex.org/W2468116983","https://openalex.org/W2948014085","https://openalex.org/W2056158083","https://openalex.org/W2187357871","https://openalex.org/W2111937814","https://openalex.org/W2029514038","https://openalex.org/W1482324242","https://openalex.org/W4289702930"],"abstract_inverted_index":null,"counts_by_year":[{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
