{"id":"https://openalex.org/W1565338435","doi":"https://doi.org/10.1007/11818564_16","title":"Incremental Maintenance of Biological Databases Using Association Rule Mining","display_name":"Incremental Maintenance of Biological Databases Using Association Rule Mining","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W1565338435","doi":"https://doi.org/10.1007/11818564_16","mag":"1565338435"},"language":"en","primary_location":{"id":"doi:10.1007/11818564_16","is_oa":true,"landing_page_url":"https://doi.org/10.1007/11818564_16","pdf_url":"https://link.springer.com/content/pdf/10.1007/11818564_16.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1007/11818564_16.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103473680","display_name":"Kai\u2010Tak Lam","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Kai-Tak Lam","raw_affiliation_strings":["Department of Electrical & Computer Engineering, National University of Singapore, 4 Engineering Drive 3, 117576, Singapore","National University of Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical & Computer Engineering, National University of Singapore, 4 Engineering Drive 3, 117576, Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"National University of Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111524970","display_name":"Judice L.Y. Koh","orcid":null},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Judice L. Y. Koh","raw_affiliation_strings":["Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","School of Computing, National University of Singapore, 3 Science Drive 2, 119260, Singapore","Inst. for Infocomm Res., Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, 21 Heng Mui Keng Terrace, 119613, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"School of Computing, National University of Singapore, 3 Science Drive 2, 119260, Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"Inst. for Infocomm Res., Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070594442","display_name":"Bharadwaj Veeravalli","orcid":"https://orcid.org/0000-0001-9000-1813"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Bharadwaj Veeravalli","raw_affiliation_strings":["Department of Electrical & Computer Engineering, National University of Singapore, 4 Engineering Drive 3, 117576, Singapore","National University of Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical & Computer Engineering, National University of Singapore, 4 Engineering Drive 3, 117576, Singapore","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"National University of Singapore","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089063979","display_name":"Vladimir Brusi\u0107","orcid":"https://orcid.org/0000-0003-0523-5266"},"institutions":[{"id":"https://openalex.org/I112745207","display_name":"Australian Centre for Plant Functional Genomics","ror":"https://ror.org/00xwvfm64","country_code":"AU","type":"facility","lineage":["https://openalex.org/I112745207"]},{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Vladimir Brusic","raw_affiliation_strings":["Australian Centre for Plant Functional Genomics, School of Land and Food Sciences, and the Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD 4072, Australia","University of Queensland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Australian Centre for Plant Functional Genomics, School of Land and Food Sciences, and the Institute for Molecular Bioscience, University of Queensland, Brisbane, QLD 4072, Australia","institution_ids":["https://openalex.org/I112745207"]},{"raw_affiliation_string":"University of Queensland","institution_ids":["https://openalex.org/I165143802"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5103473680"],"corresponding_institution_ids":["https://openalex.org/I165932596"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":{"value":5000,"currency":"EUR","value_usd":5392},"fwci":0.366,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.64819701,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"140","last_page":"150"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10538","display_name":"Data Mining Algorithms and Applications","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11063","display_name":"Rough Sets and Fuzzy Logic","score":0.9799000024795532,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8265260457992554},{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.7380881905555725},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.628165066242218},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5823720693588257},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.518983781337738},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.5114723443984985},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.10243344306945801},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0770895779132843}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8265260457992554},{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.7380881905555725},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.628165066242218},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5823720693588257},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.518983781337738},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.5114723443984985},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.10243344306945801},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0770895779132843},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11818564_16","is_oa":true,"landing_page_url":"https://doi.org/10.1007/11818564_16","pdf_url":"https://link.springer.com/content/pdf/10.1007/11818564_16.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":{"id":"doi:10.1007/11818564_16","is_oa":true,"landing_page_url":"https://doi.org/10.1007/11818564_16","pdf_url":"https://link.springer.com/content/pdf/10.1007/11818564_16.pdf","source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1565338435.pdf","grobid_xml":"https://content.openalex.org/works/W1565338435.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W19412885","https://openalex.org/W1214546200","https://openalex.org/W1482328859","https://openalex.org/W1484413656","https://openalex.org/W1506285740","https://openalex.org/W1507626491","https://openalex.org/W1529607257","https://openalex.org/W1982048285","https://openalex.org/W2018874418","https://openalex.org/W2030684440","https://openalex.org/W2047782770","https://openalex.org/W2095830119","https://openalex.org/W2115622227","https://openalex.org/W2117911835","https://openalex.org/W2127479124","https://openalex.org/W2138073318","https://openalex.org/W2166559705","https://openalex.org/W2169918010","https://openalex.org/W2793828080"],"related_works":["https://openalex.org/W128746893","https://openalex.org/W2367573304","https://openalex.org/W2537030075","https://openalex.org/W2006971496","https://openalex.org/W4310720718","https://openalex.org/W2065998343","https://openalex.org/W2369717039","https://openalex.org/W2384676159","https://openalex.org/W2982449560","https://openalex.org/W2110683262"],"abstract_inverted_index":{"Biological":[0],"research":[1],"frequently":[2],"requires":[3],"specialist":[4,71],"databases":[5,31],"to":[6,28,39,142],"support":[7,66],"in-depth":[8],"analysis":[9],"about":[10],"specific":[11],"subjects.":[12],"With":[13],"the":[14,34,99,110,135],"rapid":[15],"growth":[16],"of":[17,48,70,78,112,115,140],"biological":[18,117],"sequences":[19,42,80,147],"in":[20,89,93,105,144],"public":[21],"domain":[22],"data":[23],"sources,":[24],"it":[25],"is":[26,98,103],"difficult":[27],"keep":[29],"these":[30,149],"current":[32],"with":[33],"sources.":[35],"Simple":[36],"queries":[37,74,108],"formulated":[38],"retrieve":[40],"relevant":[41,79],"typically":[43],"return":[44],"a":[45,61,90],"large":[46],"number":[47],"false":[49,94],"matches":[50],"and":[51,122],"thus":[52],"demanding":[53],"manual":[54],"filtration.":[55],"In":[56],"this":[57],"paper,":[58],"we":[59],"propose":[60],"novel":[62],"methodology":[63,125,136],"that":[64,134],"can":[65],"automatic":[67],"incremental":[68,76,113],"updating":[69,77],"databases.":[72,118,129,151],"Complex":[73],"for":[75,109,148],"are":[81],"learned":[82],"using":[83],"Association":[84],"Rule":[85],"Mining":[86],"(ARM),":[87],"resulting":[88],"significant":[91],"reduction":[92],"positive":[95],"matches.":[96],"This":[97],"first":[100],"time":[101],"ARM":[102],"used":[104],"formulating":[106],"descriptive":[107],"purpose":[111],"maintenance":[114],"specialised":[116],"We":[119],"have":[120],"implemented":[121],"tested":[123],"our":[124],"on":[126],"two":[127,150],"real-world":[128],"Our":[130],"experiments":[131],"conclusively":[132],"show":[133],"guarantees":[137],"an":[138],"F-score":[139],"up":[141],"80%":[143],"detecting":[145],"new":[146]},"counts_by_year":[],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2025-10-10T00:00:00"}