{"id":"https://openalex.org/W1854339933","doi":"https://doi.org/10.1007/11732990_26","title":"Improving Prediction of Zinc Binding Sites by Modeling the Linkage Between Residues Close in Sequence","display_name":"Improving Prediction of Zinc Binding Sites by Modeling the Linkage Between Residues Close in Sequence","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W1854339933","doi":"https://doi.org/10.1007/11732990_26","mag":"1854339933"},"language":"en","primary_location":{"id":"doi:10.1007/11732990_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11732990_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073409995","display_name":"Sauro Menchetti","orcid":null},"institutions":[{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Sauro Menchetti","raw_affiliation_strings":["Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy","institution_ids":["https://openalex.org/I45084792"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066187890","display_name":"Andrea Passerini","orcid":"https://orcid.org/0000-0002-2765-5395"},"institutions":[{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Passerini","raw_affiliation_strings":["Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy","institution_ids":["https://openalex.org/I45084792"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027422071","display_name":"Paolo Frasconi","orcid":"https://orcid.org/0000-0003-3117-9245"},"institutions":[{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Paolo Frasconi","raw_affiliation_strings":["Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Machine Learning and Neural Networks Group, Dipartimento di Sistemi e Informatica, Universit\u00e0 degli Studi di Firenze, Italy","institution_ids":["https://openalex.org/I45084792"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079457434","display_name":"Claudia Andreini","orcid":"https://orcid.org/0000-0003-4329-8225"},"institutions":[{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Claudia Andreini","raw_affiliation_strings":["Magnetic Resonance Center (CERM), Dipartimento di Chimica, Universit\u00e0 degli Studi di Firenze, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Magnetic Resonance Center (CERM), Dipartimento di Chimica, Universit\u00e0 degli Studi di Firenze, Italy","institution_ids":["https://openalex.org/I45084792"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084306542","display_name":"Antonio Rosato","orcid":"https://orcid.org/0000-0001-6172-0368"},"institutions":[{"id":"https://openalex.org/I45084792","display_name":"University of Florence","ror":"https://ror.org/04jr1s763","country_code":"IT","type":"education","lineage":["https://openalex.org/I45084792"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Antonio Rosato","raw_affiliation_strings":["Magnetic Resonance Center (CERM), Dipartimento di Chimica, Universit\u00e0 degli Studi di Firenze, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Magnetic Resonance Center (CERM), Dipartimento di Chimica, Universit\u00e0 degli Studi di Firenze, Italy","institution_ids":["https://openalex.org/I45084792"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.8443,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.86850004,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"309","last_page":"320"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7546377182006836},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6050946712493896},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.6020151972770691},{"id":"https://openalex.org/keywords/autocorrelation","display_name":"Autocorrelation","score":0.5524281859397888},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4978046417236328},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.436212956905365},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4106454849243164},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.36260855197906494},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12897732853889465},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09598761796951294},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08905583620071411},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.08840498328208923}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7546377182006836},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6050946712493896},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.6020151972770691},{"id":"https://openalex.org/C5297727","wikidata":"https://www.wikidata.org/wiki/Q786970","display_name":"Autocorrelation","level":2,"score":0.5524281859397888},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4978046417236328},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.436212956905365},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4106454849243164},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36260855197906494},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12897732853889465},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09598761796951294},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08905583620071411},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.08840498328208923},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/11732990_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11732990_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.375.2348","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.375.2348","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://disi.unitn.it/~passerini/papers/recomb06.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.63.5223","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.63.5223","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www-dsi.dsi.unifi.it/~paolo/ps/RECOMB06.pdf","raw_type":"text"},{"id":"pmh:oai:flore.unifi.it:2158/238734","is_oa":false,"landing_page_url":"http://hdl.handle.net/2158/238734","pdf_url":null,"source":{"id":"https://openalex.org/S4306402033","display_name":"Florence Research (University of Florence)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45084792","host_organization_name":"University of Florence","host_organization_lineage":["https://openalex.org/I45084792"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"},{"id":"pmh:oai:iris.unitn.it:11572/60888","is_oa":false,"landing_page_url":"http://hdl.handle.net/11572/60888","pdf_url":null,"source":{"id":"https://openalex.org/S4306401913","display_name":"Institutional Research Information System (Universit\u00e0 degli Studi di Trento)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I193223587","host_organization_name":"University of Trento","host_organization_lineage":["https://openalex.org/I193223587"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/conferenceObject"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":22,"referenced_works":["https://openalex.org/W1510073064","https://openalex.org/W1549656520","https://openalex.org/W1601278281","https://openalex.org/W1618905105","https://openalex.org/W1666347389","https://openalex.org/W1996073320","https://openalex.org/W2007851219","https://openalex.org/W2009904974","https://openalex.org/W2038163496","https://openalex.org/W2067395459","https://openalex.org/W2099207146","https://openalex.org/W2108746608","https://openalex.org/W2119452210","https://openalex.org/W2119821739","https://openalex.org/W2123827533","https://openalex.org/W2158714788","https://openalex.org/W2163526800","https://openalex.org/W2165507978","https://openalex.org/W2168267323","https://openalex.org/W2171091522","https://openalex.org/W2962735828","https://openalex.org/W3023786531"],"related_works":["https://openalex.org/W747394405","https://openalex.org/W1987236514","https://openalex.org/W174653542","https://openalex.org/W2381153750","https://openalex.org/W2041235277","https://openalex.org/W2376206440","https://openalex.org/W4295068701","https://openalex.org/W2132971779","https://openalex.org/W2152844235","https://openalex.org/W2376454312"],"abstract_inverted_index":null,"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
