{"id":"https://openalex.org/W1547494331","doi":"https://doi.org/10.1007/11599128_8","title":"An Agent-Oriented Conceptual Framework for Systems Biology","display_name":"An Agent-Oriented Conceptual Framework for Systems Biology","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1547494331","doi":"https://doi.org/10.1007/11599128_8","mag":"1547494331"},"language":"en","primary_location":{"id":"doi:10.1007/11599128_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11599128_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085201145","display_name":"Nicola Cannata","orcid":null},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Nicola Cannata","raw_affiliation_strings":["CRIBI Biotechnology Centre, Universit\u00e0 di Padova, via Ugo Bassi 58/B, 35131, Padova, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CRIBI Biotechnology Centre, Universit\u00e0 di Padova, via Ugo Bassi 58/B, 35131, Padova, Italy","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078426900","display_name":"Flavio Corradini","orcid":"https://orcid.org/0000-0001-6767-2184"},"institutions":[{"id":"https://openalex.org/I112859197","display_name":"Universit\u00e0 di Camerino","ror":"https://ror.org/0005w8d69","country_code":"IT","type":"education","lineage":["https://openalex.org/I112859197"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Flavio Corradini","raw_affiliation_strings":["Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri, 62032, Camerino, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri, 62032, Camerino, Italy","institution_ids":["https://openalex.org/I112859197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018586673","display_name":"Emanuela Merelli","orcid":"https://orcid.org/0000-0002-1321-4134"},"institutions":[{"id":"https://openalex.org/I112859197","display_name":"Universit\u00e0 di Camerino","ror":"https://ror.org/0005w8d69","country_code":"IT","type":"education","lineage":["https://openalex.org/I112859197"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Emanuela Merelli","raw_affiliation_strings":["Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, I-62032, Camerino, Italy","Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri, 62032, Camerino, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, I-62032, Camerino, Italy","institution_ids":["https://openalex.org/I112859197"]},{"raw_affiliation_string":"Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri, 62032, Camerino, Italy","institution_ids":["https://openalex.org/I112859197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082586707","display_name":"Andrea Omicini","orcid":"https://orcid.org/0000-0002-6655-3869"},"institutions":[{"id":"https://openalex.org/I4210136873","display_name":"Azienda-Unita' Sanitaria Locale Di Cesena","ror":"https://ror.org/04kgp1379","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210136873"]},{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Andrea Omicini","raw_affiliation_strings":["Alma Mater Studiorum Universit\u00e0 di Bologna a Cesena,, via Venezia 52, 47023, Cesena, Italy","DEIS, Alma Mater Studiorum, Universit\u00e0 di Bologna, Via Venezia 52, 47023, Cesena, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Alma Mater Studiorum Universit\u00e0 di Bologna a Cesena,, via Venezia 52, 47023, Cesena, Italy","institution_ids":["https://openalex.org/I4210136873","https://openalex.org/I9360294"]},{"raw_affiliation_string":"DEIS, Alma Mater Studiorum, Universit\u00e0 di Bologna, Via Venezia 52, 47023, Cesena, Italy","institution_ids":["https://openalex.org/I9360294"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076101177","display_name":"Alessandro Ricci","orcid":"https://orcid.org/0000-0002-9222-5092"},"institutions":[{"id":"https://openalex.org/I9360294","display_name":"University of Bologna","ror":"https://ror.org/01111rn36","country_code":"IT","type":"education","lineage":["https://openalex.org/I9360294"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessandro Ricci","raw_affiliation_strings":["DEIS, Alma Mater Studiorum, Universit\u00e0 di Bologna, Via Venezia 52, 47023, Cesena, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"DEIS, Alma Mater Studiorum, Universit\u00e0 di Bologna, Via Venezia 52, 47023, Cesena, Italy","institution_ids":["https://openalex.org/I9360294"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":6.8703,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.96492528,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"105","last_page":"122"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11195","display_name":"Simulation Techniques and Applications","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9815000295639038,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7877845764160156},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6351156830787659},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.5547223091125488},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5354400277137756},{"id":"https://openalex.org/keywords/living-systems","display_name":"Living systems","score":0.5192489624023438},{"id":"https://openalex.org/keywords/complex-system","display_name":"Complex system","score":0.5041223764419556},{"id":"https://openalex.org/keywords/inheritance","display_name":"Inheritance (genetic algorithm)","score":0.4741995930671692},{"id":"https://openalex.org/keywords/modelling-biological-systems","display_name":"Modelling biological systems","score":0.45444899797439575},{"id":"https://openalex.org/keywords/biological-organism","display_name":"Biological organism","score":0.4256367087364197},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3854596018791199},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.33952176570892334},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.3228997588157654},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3138802647590637},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.1294170320034027},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.12269443273544312},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09198728203773499}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7877845764160156},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6351156830787659},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.5547223091125488},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5354400277137756},{"id":"https://openalex.org/C2776184637","wikidata":"https://www.wikidata.org/wiki/Q6506039","display_name":"Living systems","level":2,"score":0.5192489624023438},{"id":"https://openalex.org/C47822265","wikidata":"https://www.wikidata.org/wiki/Q854457","display_name":"Complex system","level":2,"score":0.5041223764419556},{"id":"https://openalex.org/C2780902518","wikidata":"https://www.wikidata.org/wiki/Q6033780","display_name":"Inheritance (genetic algorithm)","level":3,"score":0.4741995930671692},{"id":"https://openalex.org/C137866125","wikidata":"https://www.wikidata.org/wiki/Q4299308","display_name":"Modelling biological systems","level":3,"score":0.45444899797439575},{"id":"https://openalex.org/C2992918937","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Biological organism","level":3,"score":0.4256367087364197},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3854596018791199},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.33952176570892334},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.3228997588157654},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3138802647590637},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.1294170320034027},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.12269443273544312},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09198728203773499},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C2984787389","wikidata":"https://www.wikidata.org/wiki/Q4915000","display_name":"Biological materials","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/11599128_8","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11599128_8","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:cris.unibo.it:11585/22711","is_oa":false,"landing_page_url":"http://link.springer.com/10.1007/11599128_8","pdf_url":null,"source":{"id":"https://openalex.org/S4306402579","display_name":"Archivio istituzionale della ricerca (Alma Mater Studiorum Universit\u00e0 di Bologna)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210117483","host_organization_name":"Istituto di Ematologia di Bologna","host_organization_lineage":["https://openalex.org/I4210117483"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/bookPart"}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Life in Land","score":0.5199999809265137,"id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":65,"referenced_works":["https://openalex.org/W119009349","https://openalex.org/W119111975","https://openalex.org/W147776281","https://openalex.org/W176122937","https://openalex.org/W258022877","https://openalex.org/W291482096","https://openalex.org/W1499785856","https://openalex.org/W1501243469","https://openalex.org/W1503973138","https://openalex.org/W1505721208","https://openalex.org/W1509031559","https://openalex.org/W1542321590","https://openalex.org/W1549499010","https://openalex.org/W1560139716","https://openalex.org/W1561237280","https://openalex.org/W1563929024","https://openalex.org/W1568369874","https://openalex.org/W1575526407","https://openalex.org/W1575571691","https://openalex.org/W1590074943","https://openalex.org/W1594751017","https://openalex.org/W1645913739","https://openalex.org/W1778693282","https://openalex.org/W1906976581","https://openalex.org/W1963861745","https://openalex.org/W1966722314","https://openalex.org/W1980206868","https://openalex.org/W1984755421","https://openalex.org/W1986649132","https://openalex.org/W1996449803","https://openalex.org/W2003591835","https://openalex.org/W2005818379","https://openalex.org/W2007006124","https://openalex.org/W2055913285","https://openalex.org/W2058221907","https://openalex.org/W2062965120","https://openalex.org/W2101011890","https://openalex.org/W2102263388","https://openalex.org/W2103337096","https://openalex.org/W2106190666","https://openalex.org/W2110061639","https://openalex.org/W2110119905","https://openalex.org/W2124344619","https://openalex.org/W2131067724","https://openalex.org/W2134923619","https://openalex.org/W2137791798","https://openalex.org/W2138078166","https://openalex.org/W2140308918","https://openalex.org/W2140533119","https://openalex.org/W2144983435","https://openalex.org/W2145191792","https://openalex.org/W2148734427","https://openalex.org/W2150908245","https://openalex.org/W2153326881","https://openalex.org/W2155272711","https://openalex.org/W2164459678","https://openalex.org/W2263165010","https://openalex.org/W2302182661","https://openalex.org/W2342164822","https://openalex.org/W2412839122","https://openalex.org/W2495548334","https://openalex.org/W2527113450","https://openalex.org/W2608060838","https://openalex.org/W2913004508","https://openalex.org/W4294327473"],"related_works":["https://openalex.org/W4386563820","https://openalex.org/W631732704","https://openalex.org/W2155261113","https://openalex.org/W2064988479","https://openalex.org/W1748979965","https://openalex.org/W3199870583","https://openalex.org/W4254550161","https://openalex.org/W1497779830","https://openalex.org/W3157581136","https://openalex.org/W3202802607"],"abstract_inverted_index":null,"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
