{"id":"https://openalex.org/W2110119905","doi":"https://doi.org/10.1007/11599128_10","title":"Abstract Machines of Systems Biology","display_name":"Abstract Machines of Systems Biology","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2110119905","doi":"https://doi.org/10.1007/11599128_10","mag":"2110119905"},"language":"en","primary_location":{"id":"doi:10.1007/11599128_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11599128_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013220584","display_name":"Luca Cardelli","orcid":"https://orcid.org/0000-0002-8705-8488"},"institutions":[{"id":"https://openalex.org/I4210164937","display_name":"Microsoft Research (United Kingdom)","ror":"https://ror.org/05k87vq12","country_code":"GB","type":"company","lineage":["https://openalex.org/I1290206253","https://openalex.org/I4210164937"]},{"id":"https://openalex.org/I1290206253","display_name":"Microsoft (United States)","ror":"https://ror.org/00d0nc645","country_code":"US","type":"company","lineage":["https://openalex.org/I1290206253"]}],"countries":["GB","US"],"is_corresponding":true,"raw_author_name":"Luca Cardelli","raw_affiliation_strings":["Microsoft Research,","Microsoft research#TAB#"],"affiliations":[{"raw_affiliation_string":"Microsoft Research,","institution_ids":["https://openalex.org/I4210164937"]},{"raw_affiliation_string":"Microsoft research#TAB#","institution_ids":["https://openalex.org/I1290206253"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5013220584"],"corresponding_institution_ids":["https://openalex.org/I1290206253","https://openalex.org/I4210164937"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":21.1069,"has_fulltext":false,"cited_by_count":91,"citation_normalized_percentile":{"value":0.99604156,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"145","last_page":"168"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11445","display_name":"Origins and Evolution of Life","score":0.986299991607666,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7165896892547607},{"id":"https://openalex.org/keywords/notation","display_name":"Notation","score":0.6017336845397949},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5495452284812927},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.498079776763916},{"id":"https://openalex.org/keywords/synthetic-biology","display_name":"Synthetic biology","score":0.47602397203445435},{"id":"https://openalex.org/keywords/key","display_name":"Key (lock)","score":0.4574936330318451},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4559808373451233},{"id":"https://openalex.org/keywords/simple","display_name":"Simple (philosophy)","score":0.4358063340187073},{"id":"https://openalex.org/keywords/membrane-computing","display_name":"Membrane computing","score":0.4101724326610565},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.33001306653022766},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.2367122769355774},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.22453582286834717},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1549035906791687},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09178143739700317}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7165896892547607},{"id":"https://openalex.org/C45357846","wikidata":"https://www.wikidata.org/wiki/Q2001982","display_name":"Notation","level":2,"score":0.6017336845397949},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5495452284812927},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.498079776763916},{"id":"https://openalex.org/C191908910","wikidata":"https://www.wikidata.org/wiki/Q862838","display_name":"Synthetic biology","level":2,"score":0.47602397203445435},{"id":"https://openalex.org/C26517878","wikidata":"https://www.wikidata.org/wiki/Q228039","display_name":"Key (lock)","level":2,"score":0.4574936330318451},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4559808373451233},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.4358063340187073},{"id":"https://openalex.org/C96011364","wikidata":"https://www.wikidata.org/wiki/Q6815122","display_name":"Membrane computing","level":2,"score":0.4101724326610565},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.33001306653022766},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2367122769355774},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.22453582286834717},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1549035906791687},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09178143739700317},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1007/11599128_10","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11599128_10","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.104.9372","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.104.9372","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lucacardelli.name/Papers/Abstract Machines of Systems Biology (Draft).pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.115.3426","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.115.3426","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lucacardelli.name/Papers/Abstract Machines of Systems Biology (TCSB).pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.187.4272","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.187.4272","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lucacardelli.name/Papers/Abstract%20Machines%20of%20Systems%20Biology%20%28EATCS%29.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.211.5417","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.211.5417","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lucacardelli.name/Talks/2005-09-12..16%20Abstract%20Machines%20of%20SysBio%20(Dobbiaco).pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":64,"referenced_works":["https://openalex.org/W17905074","https://openalex.org/W128143198","https://openalex.org/W288838326","https://openalex.org/W291482096","https://openalex.org/W1491459594","https://openalex.org/W1495299640","https://openalex.org/W1507446426","https://openalex.org/W1522448884","https://openalex.org/W1535220465","https://openalex.org/W1540437477","https://openalex.org/W1549499010","https://openalex.org/W1564709113","https://openalex.org/W1585291104","https://openalex.org/W1585692887","https://openalex.org/W1590555036","https://openalex.org/W1603799276","https://openalex.org/W1605785205","https://openalex.org/W1644749979","https://openalex.org/W1645305843","https://openalex.org/W1645913739","https://openalex.org/W1666413479","https://openalex.org/W1968856189","https://openalex.org/W1983203262","https://openalex.org/W1986649132","https://openalex.org/W2000690799","https://openalex.org/W2001661334","https://openalex.org/W2012380912","https://openalex.org/W2021089599","https://openalex.org/W2027920505","https://openalex.org/W2037689113","https://openalex.org/W2041396547","https://openalex.org/W2058970378","https://openalex.org/W2070658593","https://openalex.org/W2075283981","https://openalex.org/W2076573105","https://openalex.org/W2080491528","https://openalex.org/W2099529102","https://openalex.org/W2106190666","https://openalex.org/W2108493072","https://openalex.org/W2110796675","https://openalex.org/W2111123076","https://openalex.org/W2112651905","https://openalex.org/W2113997157","https://openalex.org/W2130721915","https://openalex.org/W2135852310","https://openalex.org/W2137635505","https://openalex.org/W2138519564","https://openalex.org/W2153624566","https://openalex.org/W2153800196","https://openalex.org/W2155418451","https://openalex.org/W2162943184","https://openalex.org/W2284263109","https://openalex.org/W2415260637","https://openalex.org/W2606231744","https://openalex.org/W2650694610","https://openalex.org/W2743309925","https://openalex.org/W2912003593","https://openalex.org/W2914559425","https://openalex.org/W2965380781","https://openalex.org/W2965858921","https://openalex.org/W3140081426","https://openalex.org/W4206542816","https://openalex.org/W4253060067","https://openalex.org/W4255845473"],"related_works":["https://openalex.org/W2057769265","https://openalex.org/W2024161258","https://openalex.org/W1911418903","https://openalex.org/W2338895903","https://openalex.org/W3044523069","https://openalex.org/W2136248167","https://openalex.org/W2126646394","https://openalex.org/W2211443823","https://openalex.org/W1987445442","https://openalex.org/W4211049090"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
