{"id":"https://openalex.org/W2116494281","doi":"https://doi.org/10.1007/11554714_6","title":"OMA, A Comprehensive, Automated Project for the Identification of Orthologs from Complete Genome Data: Introduction and First Achievements","display_name":"OMA, A Comprehensive, Automated Project for the Identification of Orthologs from Complete Genome Data: Introduction and First Achievements","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2116494281","doi":"https://doi.org/10.1007/11554714_6","mag":"2116494281"},"language":"en","primary_location":{"id":"doi:10.1007/11554714_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11554714_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050068380","display_name":"Christophe Dessimoz","orcid":"https://orcid.org/0000-0002-2170-853X"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Christophe Dessimoz","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002622506","display_name":"Gina Cannarozzi","orcid":"https://orcid.org/0000-0002-0704-663X"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Gina Cannarozzi","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085414073","display_name":"M. Gil","orcid":"https://orcid.org/0000-0002-8406-8218"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Manuel Gil","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064597071","display_name":"Daniel Margadant","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Daniel Margadant","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104090373","display_name":"Alexander Roth","orcid":"https://orcid.org/0000-0002-5957-1161"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Alexander Roth","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002198050","display_name":"Adrian Schneider","orcid":"https://orcid.org/0000-0001-6145-0628"},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Adrian Schneider","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013025384","display_name":"Gast\u00f3n H. Gonnet","orcid":null},"institutions":[{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Gaston H. Gonnet","raw_affiliation_strings":["Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich"],"affiliations":[{"raw_affiliation_string":"Institute of Computational Science, ETH Zurich, CH-8092, Z\u00fcrich","institution_ids":["https://openalex.org/I35440088"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5050068380"],"corresponding_institution_ids":["https://openalex.org/I35440088"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":8.4433,"has_fulltext":false,"cited_by_count":77,"citation_normalized_percentile":{"value":0.97563088,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"61","last_page":"72"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7489755153656006},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.7170600891113281},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6840808391571045},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5430467128753662},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.49910831451416016},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.49348556995391846},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4847073554992676},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43742379546165466},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3643847703933716},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2836933732032776},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.12857064604759216},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11078661680221558},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10253068804740906},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08417299389839172}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7489755153656006},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.7170600891113281},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6840808391571045},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5430467128753662},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.49910831451416016},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.49348556995391846},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4847073554992676},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43742379546165466},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3643847703933716},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2836933732032776},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.12857064604759216},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11078661680221558},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10253068804740906},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08417299389839172},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1007/11554714_6","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11554714_6","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1395171","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1395171/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"     In: McLysaght, A and Huson, DH, (eds.)  (Proceedings) 3rd RECOMB International Workshop on Comparative Genomics. (pp. pp. 61-72).  SPRINGER-VERLAG BERLIN (2005)     ","raw_type":"Proceedings paper"},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:1395517","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/1395517/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"    In: McLysaght, A and Huson, DH, (eds.) Comparative Genomics. (? - ?).   Springer-Verlag New York Incorporated (2005)     ","raw_type":"Book chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.5199999809265137,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":24,"referenced_works":["https://openalex.org/W1863042168","https://openalex.org/W1890088071","https://openalex.org/W1972577597","https://openalex.org/W1981095206","https://openalex.org/W1990453950","https://openalex.org/W2004575181","https://openalex.org/W2008856488","https://openalex.org/W2057885377","https://openalex.org/W2087064593","https://openalex.org/W2099435674","https://openalex.org/W2111973517","https://openalex.org/W2123500593","https://openalex.org/W2131581981","https://openalex.org/W2133070552","https://openalex.org/W2137285541","https://openalex.org/W2138578706","https://openalex.org/W2142237411","https://openalex.org/W2148853951","https://openalex.org/W2155606054","https://openalex.org/W2157975034","https://openalex.org/W2158714788","https://openalex.org/W2159266221","https://openalex.org/W2167188257","https://openalex.org/W4252706339"],"related_works":["https://openalex.org/W2086525401","https://openalex.org/W1603736412","https://openalex.org/W2006735166","https://openalex.org/W2079327011","https://openalex.org/W2053325634","https://openalex.org/W3178279768","https://openalex.org/W193851735","https://openalex.org/W2898732673","https://openalex.org/W2888097224","https://openalex.org/W4304185162"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":7}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
