{"id":"https://openalex.org/W1887535809","doi":"https://doi.org/10.1007/11551188_49","title":"Accuracy of String Kernels for Protein Sequence Classification","display_name":"Accuracy of String Kernels for Protein Sequence Classification","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1887535809","doi":"https://doi.org/10.1007/11551188_49","mag":"1887535809"},"language":"en","primary_location":{"id":"doi:10.1007/11551188_49","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11551188_49","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038034890","display_name":"Dylan Spalding","orcid":"https://orcid.org/0000-0002-4285-2493"},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"J. Dylan Spalding","raw_affiliation_strings":["School of Engineering, Computer Science & Mathematics, University of Exeter, Harrison Building, North Park Road, Exeter, EX4 4QF, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, Computer Science & Mathematics, University of Exeter, Harrison Building, North Park Road, Exeter, EX4 4QF, UK","institution_ids":["https://openalex.org/I23923803"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014404477","display_name":"David C. Hoyle","orcid":"https://orcid.org/0000-0003-3483-5885"},"institutions":[{"id":"https://openalex.org/I23923803","display_name":"University of Exeter","ror":"https://ror.org/03yghzc09","country_code":"GB","type":"education","lineage":["https://openalex.org/I23923803"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David C. Hoyle","raw_affiliation_strings":["School of Engineering, Computer Science & Mathematics, University of Exeter, Harrison Building, North Park Road, Exeter, EX4 4QF, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Engineering, Computer Science & Mathematics, University of Exeter, Harrison Building, North Park Road, Exeter, EX4 4QF, UK","institution_ids":["https://openalex.org/I23923803"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I23923803"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.11892963,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":null,"issue":null,"first_page":"454","last_page":"460"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/string-kernel","display_name":"String kernel","score":0.8565530776977539},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.7049742341041565},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6726434230804443},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6557804346084595},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5668225884437561},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.5613143444061279},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5564588904380798},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.520908534526825},{"id":"https://openalex.org/keywords/kernel-method","display_name":"Kernel method","score":0.5139293074607849},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.47062137722969055},{"id":"https://openalex.org/keywords/sequence-logo","display_name":"Sequence logo","score":0.4570808708667755},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.45310989022254944},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.37103137373924255},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.36103910207748413},{"id":"https://openalex.org/keywords/radial-basis-function-kernel","display_name":"Radial basis function kernel","score":0.3334398567676544},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2719125747680664},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.2144266963005066},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.18950748443603516},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.13394787907600403},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.07849344611167908},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07355004549026489},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.05274641513824463}],"concepts":[{"id":"https://openalex.org/C55851704","wikidata":"https://www.wikidata.org/wiki/Q7623983","display_name":"String kernel","level":5,"score":0.8565530776977539},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.7049742341041565},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6726434230804443},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6557804346084595},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5668225884437561},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.5613143444061279},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5564588904380798},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.520908534526825},{"id":"https://openalex.org/C122280245","wikidata":"https://www.wikidata.org/wiki/Q620622","display_name":"Kernel method","level":3,"score":0.5139293074607849},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.47062137722969055},{"id":"https://openalex.org/C105082737","wikidata":"https://www.wikidata.org/wiki/Q7452470","display_name":"Sequence logo","level":5,"score":0.4570808708667755},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.45310989022254944},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.37103137373924255},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.36103910207748413},{"id":"https://openalex.org/C75866337","wikidata":"https://www.wikidata.org/wiki/Q7280263","display_name":"Radial basis function kernel","level":4,"score":0.3334398567676544},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2719125747680664},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.2144266963005066},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.18950748443603516},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.13394787907600403},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.07849344611167908},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07355004549026489},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.05274641513824463},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/11551188_49","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11551188_49","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.108.704","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.108.704","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://personalpages.manchester.ac.uk/staff/david.c.hoyle/HomePage/Publications/SpaldingHoyle_ICAPR2005.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1510073064","https://openalex.org/W1558365920","https://openalex.org/W1981276685","https://openalex.org/W2020816856","https://openalex.org/W2055043387","https://openalex.org/W2102122585","https://openalex.org/W2107725114","https://openalex.org/W2153833164","https://openalex.org/W2158714788","https://openalex.org/W2163105490","https://openalex.org/W2170960297"],"related_works":["https://openalex.org/W1558903433","https://openalex.org/W2142835450","https://openalex.org/W2020816856","https://openalex.org/W2027376491","https://openalex.org/W2092427412","https://openalex.org/W3008135798","https://openalex.org/W25367537","https://openalex.org/W2189183545","https://openalex.org/W2278188209","https://openalex.org/W2746873660"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
