{"id":"https://openalex.org/W1601182909","doi":"https://doi.org/10.1007/11549468_132","title":"Parallel Linear Space Algorithm for Large-Scale Sequence Alignment","display_name":"Parallel Linear Space Algorithm for Large-Scale Sequence Alignment","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1601182909","doi":"https://doi.org/10.1007/11549468_132","mag":"1601182909"},"language":"en","primary_location":{"id":"doi:10.1007/11549468_132","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11549468_132","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019601483","display_name":"Eric V. Li","orcid":"https://orcid.org/0000-0002-5506-5755"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Eric Li","raw_affiliation_strings":["Intel China Research Center, Intel Corporation, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center, Intel Corporation, Beijing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006296702","display_name":"Xu Cheng","orcid":"https://orcid.org/0000-0001-7536-945X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Cheng Xu","raw_affiliation_strings":["Intel China Research Center, Intel Corporation, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center, Intel Corporation, Beijing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100453572","display_name":"Tao Wang","orcid":"https://orcid.org/0000-0002-6470-8724"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Tao Wang","raw_affiliation_strings":["Intel China Research Center, Intel Corporation, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center, Intel Corporation, Beijing, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100364769","display_name":"Jin Li","orcid":"https://orcid.org/0000-0001-9201-2321"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Li Jin","raw_affiliation_strings":["Intel China Research Center, Intel Corporation, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center, Intel Corporation, Beijing, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100391587","display_name":"Yimin Zhang","orcid":"https://orcid.org/0000-0001-7673-8800"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yimin Zhang","raw_affiliation_strings":["Intel China Research Center, Intel Corporation, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intel China Research Center, Intel Corporation, Beijing, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":7,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1207","last_page":"1216"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7760694026947021},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.7547397017478943},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5943997502326965},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.578438401222229},{"id":"https://openalex.org/keywords/parallel-algorithm","display_name":"Parallel algorithm","score":0.5746383666992188},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.5409996509552002},{"id":"https://openalex.org/keywords/partition","display_name":"Partition (number theory)","score":0.4696590006351471},{"id":"https://openalex.org/keywords/grid","display_name":"Grid","score":0.459663987159729},{"id":"https://openalex.org/keywords/dynamic-programming","display_name":"Dynamic programming","score":0.4401721954345703},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.42568543553352356},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.3179914355278015},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1395092010498047}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7760694026947021},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.7547397017478943},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5943997502326965},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.578438401222229},{"id":"https://openalex.org/C120373497","wikidata":"https://www.wikidata.org/wiki/Q1087987","display_name":"Parallel algorithm","level":2,"score":0.5746383666992188},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.5409996509552002},{"id":"https://openalex.org/C42812","wikidata":"https://www.wikidata.org/wiki/Q1082910","display_name":"Partition (number theory)","level":2,"score":0.4696590006351471},{"id":"https://openalex.org/C187691185","wikidata":"https://www.wikidata.org/wiki/Q2020720","display_name":"Grid","level":2,"score":0.459663987159729},{"id":"https://openalex.org/C37404715","wikidata":"https://www.wikidata.org/wiki/Q380679","display_name":"Dynamic programming","level":2,"score":0.4401721954345703},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.42568543553352356},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.3179914355278015},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1395092010498047},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11549468_132","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11549468_132","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W1567669771","https://openalex.org/W2004754163","https://openalex.org/W2014145971","https://openalex.org/W2074231493","https://openalex.org/W2087064593","https://openalex.org/W2095685450","https://openalex.org/W2108215151","https://openalex.org/W2126017428","https://openalex.org/W2152331922","https://openalex.org/W2165654401","https://openalex.org/W4312489764"],"related_works":["https://openalex.org/W1482324242","https://openalex.org/W2051969447","https://openalex.org/W2111937814","https://openalex.org/W2162923930","https://openalex.org/W2133116680","https://openalex.org/W2091678889","https://openalex.org/W2143599190","https://openalex.org/W1608334680","https://openalex.org/W2119732072","https://openalex.org/W1989397826"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
