{"id":"https://openalex.org/W1536699124","doi":"https://doi.org/10.1007/11539117_161","title":"Composite Module Analyst: Tool for Prediction of DNA Transcription Regulation. Testing on Simulated Data","display_name":"Composite Module Analyst: Tool for Prediction of DNA Transcription Regulation. Testing on Simulated Data","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1536699124","doi":"https://doi.org/10.1007/11539117_161","mag":"1536699124"},"language":"en","primary_location":{"id":"doi:10.1007/11539117_161","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11539117_161","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035919860","display_name":"Tatiana Konovalova","orcid":"https://orcid.org/0000-0001-8405-0563"},"institutions":[{"id":"https://openalex.org/I4210116466","display_name":"Institute of Cytology and Genetics","ror":"https://ror.org/0277xgb12","country_code":"RU","type":"facility","lineage":["https://openalex.org/I1313323035","https://openalex.org/I1313323035","https://openalex.org/I188973947","https://openalex.org/I4210116466","https://openalex.org/I4210127387","https://openalex.org/I4210129690"]}],"countries":["RU"],"is_corresponding":true,"raw_author_name":"Tatiana Konovalova","raw_affiliation_strings":["Institue of Citology and Genetics, 10, Lavrentev ave, 630090, Novosibirsk, Russia","Institue of Citology and Genetics, Novosibirsk, Russia#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institue of Citology and Genetics, 10, Lavrentev ave, 630090, Novosibirsk, Russia","institution_ids":["https://openalex.org/I4210116466"]},{"raw_affiliation_string":"Institue of Citology and Genetics, Novosibirsk, Russia#TAB#","institution_ids":["https://openalex.org/I4210116466"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028143471","display_name":"Tagir Valeev","orcid":"https://orcid.org/0000-0002-0400-6114"},"institutions":[{"id":"https://openalex.org/I4210092286","display_name":"Institute of Informatics Problems","ror":"https://ror.org/00n8bqs64","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210092286"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Tagir Valeev","raw_affiliation_strings":["A.P. Ershov\u2019s Institute of Informatics Systems, 6, Lavrentiev ave, 630090, Novosibirsk, Russia","A.P. Ershov's Institute of Informatics Systems, Novosibirsk, Russia#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"A.P. Ershov\u2019s Institute of Informatics Systems, 6, Lavrentiev ave, 630090, Novosibirsk, Russia","institution_ids":[]},{"raw_affiliation_string":"A.P. Ershov's Institute of Informatics Systems, Novosibirsk, Russia#TAB#","institution_ids":["https://openalex.org/I4210092286"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008196139","display_name":"E. Cheremushkin","orcid":null},"institutions":[{"id":"https://openalex.org/I4210092286","display_name":"Institute of Informatics Problems","ror":"https://ror.org/00n8bqs64","country_code":"RU","type":"facility","lineage":["https://openalex.org/I4210092286"]}],"countries":["RU"],"is_corresponding":false,"raw_author_name":"Evgeny Cheremushkin","raw_affiliation_strings":["A.P. Ershov\u2019s Institute of Informatics Systems, 6, Lavrentiev ave, 630090, Novosibirsk, Russia","A.P. Ershov's Institute of Informatics Systems, Novosibirsk, Russia#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"A.P. Ershov\u2019s Institute of Informatics Systems, 6, Lavrentiev ave, 630090, Novosibirsk, Russia","institution_ids":[]},{"raw_affiliation_string":"A.P. Ershov's Institute of Informatics Systems, Novosibirsk, Russia#TAB#","institution_ids":["https://openalex.org/I4210092286"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016954113","display_name":"Alexander Kel","orcid":"https://orcid.org/0000-0001-6775-2467"},"institutions":[{"id":"https://openalex.org/I4210120325","display_name":"Biobase (Germany)","ror":"https://ror.org/0325nt175","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210120325"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Kel","raw_affiliation_strings":["BIOBASE GmbH, Halchtersche Str. 33, D-38304, Wolfenb\u00fcttel, Germany","BIOBASE GmbH, Wolfenb\u00fcttel, Germany#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BIOBASE GmbH, Halchtersche Str. 33, D-38304, Wolfenb\u00fcttel, Germany","institution_ids":["https://openalex.org/I4210120325"]},{"raw_affiliation_string":"BIOBASE GmbH, Wolfenb\u00fcttel, Germany#TAB#","institution_ids":["https://openalex.org/I4210120325"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5035919860"],"corresponding_institution_ids":["https://openalex.org/I4210116466"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.5451,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.72607656,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1202","last_page":"1205"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.5213000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.5213000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.5189999938011169,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.6743382811546326},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6404961943626404},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6244435906410217},{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.5745301842689514},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5130623579025269},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.4814283549785614},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.4644710123538971},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4459359645843506},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.34785985946655273},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3405342400074005}],"concepts":[{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.6743382811546326},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6404961943626404},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6244435906410217},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.5745301842689514},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5130623579025269},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.4814283549785614},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.4644710123538971},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4459359645843506},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.34785985946655273},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3405342400074005},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11539117_161","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11539117_161","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W2060553370","https://openalex.org/W2094036688","https://openalex.org/W2158314946","https://openalex.org/W2166898290"],"related_works":["https://openalex.org/W1969771092","https://openalex.org/W2795723184","https://openalex.org/W2025529750","https://openalex.org/W2891858816","https://openalex.org/W184057646","https://openalex.org/W2042874675","https://openalex.org/W3212414177","https://openalex.org/W129398428","https://openalex.org/W1967718992","https://openalex.org/W2139566393"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-06-13T06:13:01.061226","created_date":"2025-10-10T00:00:00"}