{"id":"https://openalex.org/W1582146631","doi":"https://doi.org/10.1007/11532323_4","title":"Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites","display_name":"Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1582146631","doi":"https://doi.org/10.1007/11532323_4","mag":"1582146631"},"language":"en","primary_location":{"id":"doi:10.1007/11532323_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11532323_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022975867","display_name":"Joel Rozowsky","orcid":"https://orcid.org/0000-0002-3565-0762"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Joel Rozowsky","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023094545","display_name":"Paul Bertone","orcid":"https://orcid.org/0000-0001-5059-4829"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Paul Bertone","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021822878","display_name":"Thomas Royce","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Royce","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112337459","display_name":"Sherman M. Weissman","orcid":null},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sherman Weissman","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024120181","display_name":"M Snyder","orcid":"https://orcid.org/0000-0003-0784-7987"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Snyder","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042321575","display_name":"Mark Gerstein","orcid":"https://orcid.org/0000-0002-9746-3719"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Gerstein","raw_affiliation_strings":["Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Molecular Biophysics & Biochemistry, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5022975867"],"corresponding_institution_ids":["https://openalex.org/I32971472"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.1152702,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"28","last_page":"29"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9990000128746033,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9829000234603882,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tiling-array","display_name":"Tiling array","score":0.8499460220336914},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5824439525604248},{"id":"https://openalex.org/keywords/chromatin-immunoprecipitation","display_name":"Chromatin immunoprecipitation","score":0.5728006958961487},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5648545622825623},{"id":"https://openalex.org/keywords/amplicon","display_name":"Amplicon","score":0.46517348289489746},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4445953965187073},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.4345465898513794},{"id":"https://openalex.org/keywords/genomic-dna","display_name":"genomic DNA","score":0.41854211688041687},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.41403210163116455},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4127594530582428},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.24426668882369995},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.22071146965026855},{"id":"https://openalex.org/keywords/polymerase-chain-reaction","display_name":"Polymerase chain reaction","score":0.1167660653591156},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.10981637239456177},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.07819241285324097}],"concepts":[{"id":"https://openalex.org/C119401833","wikidata":"https://www.wikidata.org/wiki/Q7802158","display_name":"Tiling array","level":5,"score":0.8499460220336914},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5824439525604248},{"id":"https://openalex.org/C134320426","wikidata":"https://www.wikidata.org/wiki/Q901026","display_name":"Chromatin immunoprecipitation","level":5,"score":0.5728006958961487},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5648545622825623},{"id":"https://openalex.org/C8185291","wikidata":"https://www.wikidata.org/wiki/Q2844457","display_name":"Amplicon","level":4,"score":0.46517348289489746},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4445953965187073},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.4345465898513794},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.41854211688041687},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.41403210163116455},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4127594530582428},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.24426668882369995},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.22071146965026855},{"id":"https://openalex.org/C49105822","wikidata":"https://www.wikidata.org/wiki/Q176996","display_name":"Polymerase chain reaction","level":3,"score":0.1167660653591156},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.10981637239456177},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.07819241285324097}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11532323_4","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11532323_4","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":10,"referenced_works":["https://openalex.org/W1978677326","https://openalex.org/W2012363927","https://openalex.org/W2053833990","https://openalex.org/W2106554405","https://openalex.org/W2114112529","https://openalex.org/W2120935357","https://openalex.org/W2136725005","https://openalex.org/W2147170044","https://openalex.org/W2154074258","https://openalex.org/W2161191296"],"related_works":["https://openalex.org/W1975694968","https://openalex.org/W2164235180","https://openalex.org/W1966352654","https://openalex.org/W2050769938","https://openalex.org/W1978677326","https://openalex.org/W196124755","https://openalex.org/W2395975409","https://openalex.org/W2410864125","https://openalex.org/W2138006094","https://openalex.org/W2049726768"],"abstract_inverted_index":null,"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}