{"id":"https://openalex.org/W1606702207","doi":"https://doi.org/10.1007/11532323_34","title":"Gene Prediction by Syntenic Alignment","display_name":"Gene Prediction by Syntenic Alignment","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1606702207","doi":"https://doi.org/10.1007/11532323_34","mag":"1606702207"},"language":"en","primary_location":{"id":"doi:10.1007/11532323_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11532323_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083018192","display_name":"Said Sadique Adi","orcid":"https://orcid.org/0000-0002-0349-7441"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210092357","display_name":"Institute of Mathematics and Computer Science","ror":"https://ror.org/00fy4at53","country_code":"MD","type":"facility","lineage":["https://openalex.org/I112090838","https://openalex.org/I4210092357"]}],"countries":["BR","MD"],"is_corresponding":false,"raw_author_name":"Said Sadique Adi","raw_affiliation_strings":["Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), Rua do Mat\u00e3o 1010 \u2013 Cidade, Universit\u00e1ria, 05508-900, S\u00e3o Paulo, (SP), Brazil","Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), S\u00e3o Paulo, (SP), Brazil#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), Rua do Mat\u00e3o 1010 \u2013 Cidade, Universit\u00e1ria, 05508-900, S\u00e3o Paulo, (SP), Brazil","institution_ids":["https://openalex.org/I4210092357"]},{"raw_affiliation_string":"Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), S\u00e3o Paulo, (SP), Brazil#TAB#","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103212438","display_name":"Carlos Eduardo Ferreira","orcid":"https://orcid.org/0000-0003-4804-5788"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210092357","display_name":"Institute of Mathematics and Computer Science","ror":"https://ror.org/00fy4at53","country_code":"MD","type":"facility","lineage":["https://openalex.org/I112090838","https://openalex.org/I4210092357"]}],"countries":["BR","MD"],"is_corresponding":false,"raw_author_name":"Carlos Eduardo Ferreira","raw_affiliation_strings":["Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), Rua do Mat\u00e3o 1010 \u2013 Cidade, Universit\u00e1ria, 05508-900, S\u00e3o Paulo, (SP), Brazil","Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), S\u00e3o Paulo, (SP), Brazil#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), Rua do Mat\u00e3o 1010 \u2013 Cidade, Universit\u00e1ria, 05508-900, S\u00e3o Paulo, (SP), Brazil","institution_ids":["https://openalex.org/I4210092357"]},{"raw_affiliation_string":"Institute of Mathematics and Statistics (IME), University of S\u00e3o Paulo (USP), S\u00e3o Paulo, (SP), Brazil#TAB#","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.057,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.81128813,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"246","last_page":"250"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12946","display_name":"Fractal and DNA sequence analysis","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/synteny","display_name":"Synteny","score":0.8899240493774414},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6674610376358032},{"id":"https://openalex.org/keywords/gene-prediction","display_name":"Gene prediction","score":0.611325740814209},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.5372694730758667},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5109149813652039},{"id":"https://openalex.org/keywords/alignment-free-sequence-analysis","display_name":"Alignment-free sequence analysis","score":0.49429798126220703},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.48320019245147705},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.45943209528923035},{"id":"https://openalex.org/keywords/smith\u2013waterman-algorithm","display_name":"Smith\u2013Waterman algorithm","score":0.447068452835083},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4343108832836151},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.42554765939712524},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.41513317823410034},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3204301595687866},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.31833159923553467},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2738381326198578},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.0993075966835022}],"concepts":[{"id":"https://openalex.org/C53702515","wikidata":"https://www.wikidata.org/wiki/Q971246","display_name":"Synteny","level":4,"score":0.8899240493774414},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6674610376358032},{"id":"https://openalex.org/C105565629","wikidata":"https://www.wikidata.org/wiki/Q1248292","display_name":"Gene prediction","level":4,"score":0.611325740814209},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.5372694730758667},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5109149813652039},{"id":"https://openalex.org/C180384323","wikidata":"https://www.wikidata.org/wiki/Q16335137","display_name":"Alignment-free sequence analysis","level":5,"score":0.49429798126220703},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.48320019245147705},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.45943209528923035},{"id":"https://openalex.org/C72802188","wikidata":"https://www.wikidata.org/wiki/Q1683352","display_name":"Smith\u2013Waterman algorithm","level":5,"score":0.447068452835083},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4343108832836151},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.42554765939712524},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.41513317823410034},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3204301595687866},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.31833159923553467},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2738381326198578},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.0993075966835022},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11532323_34","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11532323_34","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W1966833356","https://openalex.org/W2006254161","https://openalex.org/W2116688916","https://openalex.org/W2126598626","https://openalex.org/W2151464048"],"related_works":["https://openalex.org/W1486249959","https://openalex.org/W2948014085","https://openalex.org/W2051969447","https://openalex.org/W4386770652","https://openalex.org/W2885386129","https://openalex.org/W2468116983","https://openalex.org/W2122131968","https://openalex.org/W2103737249","https://openalex.org/W2620591814","https://openalex.org/W1606702207"],"abstract_inverted_index":null,"counts_by_year":[{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
