{"id":"https://openalex.org/W1767872581","doi":"https://doi.org/10.1007/11530084_16","title":"Cluster Based Integration of Heterogeneous Biological Databases Using the AutoMed Toolkit","display_name":"Cluster Based Integration of Heterogeneous Biological Databases Using the AutoMed Toolkit","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1767872581","doi":"https://doi.org/10.1007/11530084_16","mag":"1767872581"},"language":"en","primary_location":{"id":"doi:10.1007/11530084_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11530084_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024374803","display_name":"Michael Maibaum","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Michael Maibaum","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, University College London, London","Department of Biochemistry and Molecular Biology, University College London, London,"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University College London, London","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University College London, London,","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032323128","display_name":"Lucas Zamboulis","orcid":null},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lucas Zamboulis","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck College, University of London, London","School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#","institution_ids":["https://openalex.org/I98259816"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079224406","display_name":"Galia Rimon","orcid":null},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Galia Rimon","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck College, University of London, London","School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#","institution_ids":["https://openalex.org/I98259816"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081250379","display_name":"Christine Orengo","orcid":null},"institutions":[{"id":"https://openalex.org/I45129253","display_name":"University College London","ror":"https://ror.org/02jx3x895","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I45129253"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Christine Orengo","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, University College London, London","Department of Biochemistry and Molecular Biology, University College London, London,"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University College London, London","institution_ids":["https://openalex.org/I45129253"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, University College London, London,","institution_ids":["https://openalex.org/I45129253"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003338221","display_name":"Nigel Martin","orcid":"https://orcid.org/0000-0002-1702-1938"},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nigel Martin","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck College, University of London, London","School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#","institution_ids":["https://openalex.org/I98259816"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051400056","display_name":"Alexandra Poulovassilis","orcid":"https://orcid.org/0000-0001-8981-4104"},"institutions":[{"id":"https://openalex.org/I98259816","display_name":"Birkbeck, University of London","ror":"https://ror.org/02mb95055","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I98259816"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Alexandra Poulovassilis","raw_affiliation_strings":["School of Computer Science and Information Systems, Birkbeck College, University of London, London","School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London","institution_ids":["https://openalex.org/I98259816"]},{"raw_affiliation_string":"School of Computer Science and Information Systems, Birkbeck College, University of London, London#TAB#","institution_ids":["https://openalex.org/I98259816"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5024374803"],"corresponding_institution_ids":["https://openalex.org/I45129253"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":2.6384,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.90363681,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"191","last_page":"207"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/data-warehouse","display_name":"Data warehouse","score":0.8655061721801758},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8402610421180725},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.6914289593696594},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.544196367263794},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.5369802117347717},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5288261771202087},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.5065306425094604},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.4851275384426117},{"id":"https://openalex.org/keywords/extensibility","display_name":"Extensibility","score":0.4772355854511261},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4318958520889282},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.42548519372940063},{"id":"https://openalex.org/keywords/data-architecture","display_name":"Data architecture","score":0.4205991327762604},{"id":"https://openalex.org/keywords/data-transformation","display_name":"Data transformation","score":0.41066282987594604},{"id":"https://openalex.org/keywords/reference-architecture","display_name":"Reference architecture","score":0.2219308316707611},{"id":"https://openalex.org/keywords/software-architecture","display_name":"Software architecture","score":0.20500448346138},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10108992457389832},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08688011765480042},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.08046659827232361},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.07219603657722473}],"concepts":[{"id":"https://openalex.org/C135572916","wikidata":"https://www.wikidata.org/wiki/Q193351","display_name":"Data warehouse","level":2,"score":0.8655061721801758},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8402610421180725},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.6914289593696594},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.544196367263794},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.5369802117347717},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5288261771202087},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.5065306425094604},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.4851275384426117},{"id":"https://openalex.org/C32833848","wikidata":"https://www.wikidata.org/wiki/Q4115054","display_name":"Extensibility","level":2,"score":0.4772355854511261},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4318958520889282},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.42548519372940063},{"id":"https://openalex.org/C94070970","wikidata":"https://www.wikidata.org/wiki/Q638422","display_name":"Data architecture","level":5,"score":0.4205991327762604},{"id":"https://openalex.org/C150670458","wikidata":"https://www.wikidata.org/wiki/Q4272815","display_name":"Data transformation","level":3,"score":0.41066282987594604},{"id":"https://openalex.org/C55356503","wikidata":"https://www.wikidata.org/wiki/Q2136675","display_name":"Reference architecture","level":4,"score":0.2219308316707611},{"id":"https://openalex.org/C35869016","wikidata":"https://www.wikidata.org/wiki/Q846636","display_name":"Software architecture","level":3,"score":0.20500448346138},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10108992457389832},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08688011765480042},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.08046659827232361},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.07219603657722473},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1007/11530084_16","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11530084_16","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.106.5037","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.106.5037","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.dcs.bbk.ac.uk/~nigel/bioinf/dils05_v6.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.62.1473","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.62.1473","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.dcs.bbk.ac.uk/~lucas/pubs/papers/MZRMP05.ps","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.63.2852","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.63.2852","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.dcs.bbk.ac.uk/~lucas/pubs/reports/clusterTR.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.65.6077","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.65.6077","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.dcs.bbk.ac.uk/~lucas/pubs/papers/MZRMP05.pdf","raw_type":"text"},{"id":"pmh:oai:eprints.bbk.ac.uk.oai2:8013","is_oa":false,"landing_page_url":"https://eprints.bbk.ac.uk/id/eprint/8013/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400466","display_name":"BIROn (Birkbeck, University of London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I98259816","host_organization_name":"Birkbeck, University of London","host_organization_lineage":["https://openalex.org/I98259816"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Book Section"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W121728176","https://openalex.org/W1486283310","https://openalex.org/W1515036872","https://openalex.org/W1560573671","https://openalex.org/W1580427132","https://openalex.org/W1624976387","https://openalex.org/W1681625220","https://openalex.org/W1964903151","https://openalex.org/W1968766436","https://openalex.org/W1982818491","https://openalex.org/W1983385867","https://openalex.org/W1983594585","https://openalex.org/W2051795211","https://openalex.org/W2094258495","https://openalex.org/W2096525273","https://openalex.org/W2101732327","https://openalex.org/W2103017472","https://openalex.org/W2103538877","https://openalex.org/W2108067237","https://openalex.org/W2114049512","https://openalex.org/W2124166542","https://openalex.org/W2124520930","https://openalex.org/W2134356404","https://openalex.org/W2141084532","https://openalex.org/W2142237411","https://openalex.org/W2143299777","https://openalex.org/W2165739018","https://openalex.org/W2339920159","https://openalex.org/W2401190836","https://openalex.org/W2479821238","https://openalex.org/W2501776421","https://openalex.org/W2561675875","https://openalex.org/W4245180151","https://openalex.org/W4312092243"],"related_works":["https://openalex.org/W2307569040","https://openalex.org/W2541393756","https://openalex.org/W2131941936","https://openalex.org/W2060096282","https://openalex.org/W2385643360","https://openalex.org/W2739872940","https://openalex.org/W115596161","https://openalex.org/W1983206747","https://openalex.org/W2167730203","https://openalex.org/W1537750021"],"abstract_inverted_index":null,"counts_by_year":[{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
