{"id":"https://openalex.org/W2138454694","doi":"https://doi.org/10.1007/11430919_26","title":"A Novel Indexing Method for Efficient Sequence Matching in Large DNA Database Environment","display_name":"A Novel Indexing Method for Efficient Sequence Matching in Large DNA Database Environment","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W2138454694","doi":"https://doi.org/10.1007/11430919_26","mag":"2138454694"},"language":"en","primary_location":{"id":"doi:10.1007/11430919_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11430919_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068972746","display_name":"Jung-Im Won","orcid":"https://orcid.org/0000-0003-3591-7735"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jung-Im Won","raw_affiliation_strings":["Department of Computer Science, Yonsei University, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Yonsei University, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027497636","display_name":"Jeehee Yoon","orcid":"https://orcid.org/0000-0002-4327-3135"},"institutions":[{"id":"https://openalex.org/I146824383","display_name":"Hallym University","ror":"https://ror.org/03sbhge02","country_code":"KR","type":"education","lineage":["https://openalex.org/I146824383"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Jee-Hee Yoon","raw_affiliation_strings":["Division of Information Engineering and Telecommunications, Hallym University, Korea","Division of Information Engineering and Telecommunications, Hallym                         University, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Information Engineering and Telecommunications, Hallym University, Korea","institution_ids":["https://openalex.org/I146824383"]},{"raw_affiliation_string":"Division of Information Engineering and Telecommunications, Hallym                         University, Korea","institution_ids":["https://openalex.org/I146824383"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100322270","display_name":"Sanghyun Park","orcid":"https://orcid.org/0000-0002-5196-6193"},"institutions":[{"id":"https://openalex.org/I193775966","display_name":"Yonsei University","ror":"https://ror.org/01wjejq96","country_code":"KR","type":"education","lineage":["https://openalex.org/I193775966"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sanghyun Park","raw_affiliation_strings":["Department of Computer Science, Yonsei University, Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Yonsei University, Korea","institution_ids":["https://openalex.org/I193775966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100656150","display_name":"Sang\u2010Wook Kim","orcid":"https://orcid.org/0000-0002-6345-9084"},"institutions":[{"id":"https://openalex.org/I4575257","display_name":"Hanyang University","ror":"https://ror.org/046865y68","country_code":"KR","type":"education","lineage":["https://openalex.org/I4575257"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Sang-Wook Kim","raw_affiliation_strings":["College of Information and Communications, Hanyang University, Korea","College of Information and Communications, Hanyang Univ., Korea"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information and Communications, Hanyang University, Korea","institution_ids":["https://openalex.org/I4575257"]},{"raw_affiliation_string":"College of Information and Communications, Hanyang Univ., Korea","institution_ids":["https://openalex.org/I4575257"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"203","last_page":"215"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12326","display_name":"Network Packet Processing and Optimization","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1708","display_name":"Hardware and Architecture"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9786999821662903,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/trie","display_name":"Trie","score":0.8796876668930054},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8278913497924805},{"id":"https://openalex.org/keywords/suffix-tree","display_name":"Suffix tree","score":0.7466541528701782},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.7285061478614807},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.6605770587921143},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5818811655044556},{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.5429418683052063},{"id":"https://openalex.org/keywords/approximate-string-matching","display_name":"Approximate string matching","score":0.541304886341095},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.5306792855262756},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.5017642974853516},{"id":"https://openalex.org/keywords/compressed-suffix-array","display_name":"Compressed suffix array","score":0.48123764991760254},{"id":"https://openalex.org/keywords/overhead","display_name":"Overhead (engineering)","score":0.4797557592391968},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.4530697166919708},{"id":"https://openalex.org/keywords/suffix-array","display_name":"Suffix array","score":0.4491623342037201},{"id":"https://openalex.org/keywords/suffix","display_name":"Suffix","score":0.4356105327606201},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4188340902328491},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.41622117161750793},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39227885007858276},{"id":"https://openalex.org/keywords/data-structure","display_name":"Data structure","score":0.34274792671203613},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.17880967259407043},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1585572063922882},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10956740379333496},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08274197578430176}],"concepts":[{"id":"https://openalex.org/C190290938","wikidata":"https://www.wikidata.org/wiki/Q387015","display_name":"Trie","level":3,"score":0.8796876668930054},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8278913497924805},{"id":"https://openalex.org/C2781166958","wikidata":"https://www.wikidata.org/wiki/Q1426863","display_name":"Suffix tree","level":3,"score":0.7466541528701782},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.7285061478614807},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.6605770587921143},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5818811655044556},{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.5429418683052063},{"id":"https://openalex.org/C32610155","wikidata":"https://www.wikidata.org/wiki/Q1798621","display_name":"Approximate string matching","level":3,"score":0.541304886341095},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.5306792855262756},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.5017642974853516},{"id":"https://openalex.org/C100903775","wikidata":"https://www.wikidata.org/wiki/Q5157028","display_name":"Compressed suffix array","level":4,"score":0.48123764991760254},{"id":"https://openalex.org/C2779960059","wikidata":"https://www.wikidata.org/wiki/Q7113681","display_name":"Overhead (engineering)","level":2,"score":0.4797557592391968},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.4530697166919708},{"id":"https://openalex.org/C2779259728","wikidata":"https://www.wikidata.org/wiki/Q281472","display_name":"Suffix array","level":3,"score":0.4491623342037201},{"id":"https://openalex.org/C2779804580","wikidata":"https://www.wikidata.org/wiki/Q102047","display_name":"Suffix","level":2,"score":0.4356105327606201},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4188340902328491},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.41622117161750793},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39227885007858276},{"id":"https://openalex.org/C162319229","wikidata":"https://www.wikidata.org/wiki/Q175263","display_name":"Data structure","level":2,"score":0.34274792671203613},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.17880967259407043},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1585572063922882},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10956740379333496},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08274197578430176},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1007/11430919_26","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11430919_26","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.6600000262260437,"display_name":"Life below water","id":"https://metadata.un.org/sdg/14"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":20,"referenced_works":["https://openalex.org/W1529615245","https://openalex.org/W1764926552","https://openalex.org/W1834151548","https://openalex.org/W1971428680","https://openalex.org/W1986324942","https://openalex.org/W2021809202","https://openalex.org/W2030428223","https://openalex.org/W2055043387","https://openalex.org/W2057552436","https://openalex.org/W2068421750","https://openalex.org/W2087064593","https://openalex.org/W2103487267","https://openalex.org/W2108235229","https://openalex.org/W2109464129","https://openalex.org/W2116628377","https://openalex.org/W2124281279","https://openalex.org/W2151135734","https://openalex.org/W2152331922","https://openalex.org/W2157812308","https://openalex.org/W4236611442"],"related_works":["https://openalex.org/W2003608043","https://openalex.org/W2063841356","https://openalex.org/W2405149725","https://openalex.org/W2067974452","https://openalex.org/W2118703123","https://openalex.org/W4385595111","https://openalex.org/W2124852384","https://openalex.org/W2142644988","https://openalex.org/W2171073185","https://openalex.org/W1990061958"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
