{"id":"https://openalex.org/W1498220747","doi":"https://doi.org/10.1007/11428848_114","title":"String Kernels of Imperfect Matches for Off-target Detection in RNA Interference","display_name":"String Kernels of Imperfect Matches for Off-target Detection in RNA Interference","publication_year":2005,"publication_date":"2005-01-01","ids":{"openalex":"https://openalex.org/W1498220747","doi":"https://doi.org/10.1007/11428848_114","mag":"1498220747"},"language":"en","primary_location":{"id":"doi:10.1007/11428848_114","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11428848_114","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},"type":"book-chapter","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031840171","display_name":"Shibin Qiu","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Shibin Qiu","raw_affiliation_strings":["Dept. of Computer Science, University of New Mexico, Albuquerque, NM, 87131"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, University of New Mexico, Albuquerque, NM, 87131","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020376623","display_name":"Terran Lane","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Terran Lane","raw_affiliation_strings":["Dept. of Computer Science, University of New Mexico, Albuquerque, NM, 87131"],"affiliations":[{"raw_affiliation_string":"Dept. of Computer Science, University of New Mexico, Albuquerque, NM, 87131","institution_ids":["https://openalex.org/I169521973"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5031840171"],"corresponding_institution_ids":["https://openalex.org/I169521973"],"apc_list":{"value":5000,"currency":"EUR","value_usd":5392},"apc_paid":null,"fwci":1.0553,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.80034636,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"894","last_page":"902"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.7918164730072021},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.582931637763977},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.5810897350311279},{"id":"https://openalex.org/keywords/interference","display_name":"Interference (communication)","score":0.5796673893928528},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5570387840270996},{"id":"https://openalex.org/keywords/gene-silencing","display_name":"Gene silencing","score":0.513645589351654},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5097829699516296},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.46698349714279175},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.45932385325431824},{"id":"https://openalex.org/keywords/string-searching-algorithm","display_name":"String searching algorithm","score":0.4283060133457184},{"id":"https://openalex.org/keywords/rna-silencing","display_name":"RNA silencing","score":0.4193258583545685},{"id":"https://openalex.org/keywords/oligonucleotide","display_name":"Oligonucleotide","score":0.41297075152397156},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3911692500114441},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3300187587738037},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3244703412055969},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.28184592723846436},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.16220539808273315},{"id":"https://openalex.org/keywords/pattern-matching","display_name":"Pattern matching","score":0.15889891982078552},{"id":"https://openalex.org/keywords/channel","display_name":"Channel (broadcasting)","score":0.09269008040428162},{"id":"https://openalex.org/keywords/telecommunications","display_name":"Telecommunications","score":0.08374068140983582}],"concepts":[{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.7918164730072021},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.582931637763977},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.5810897350311279},{"id":"https://openalex.org/C32022120","wikidata":"https://www.wikidata.org/wiki/Q797225","display_name":"Interference (communication)","level":3,"score":0.5796673893928528},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5570387840270996},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.513645589351654},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5097829699516296},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.46698349714279175},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.45932385325431824},{"id":"https://openalex.org/C7757238","wikidata":"https://www.wikidata.org/wiki/Q374040","display_name":"String searching algorithm","level":3,"score":0.4283060133457184},{"id":"https://openalex.org/C2191507","wikidata":"https://www.wikidata.org/wiki/Q7277185","display_name":"RNA silencing","level":5,"score":0.4193258583545685},{"id":"https://openalex.org/C129312508","wikidata":"https://www.wikidata.org/wiki/Q133686","display_name":"Oligonucleotide","level":3,"score":0.41297075152397156},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3911692500114441},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3300187587738037},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3244703412055969},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.28184592723846436},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.16220539808273315},{"id":"https://openalex.org/C68859911","wikidata":"https://www.wikidata.org/wiki/Q1503724","display_name":"Pattern matching","level":2,"score":0.15889891982078552},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.09269008040428162},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.08374068140983582},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1007/11428848_114","is_oa":false,"landing_page_url":"https://doi.org/10.1007/11428848_114","pdf_url":null,"source":{"id":"https://openalex.org/S106296714","display_name":"Lecture notes in computer science","issn_l":"0302-9743","issn":["0302-9743","1611-3349"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"book series"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Lecture Notes in Computer Science","raw_type":"book-chapter"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.122.8410","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.122.8410","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.cs.unm.edu/~terran/downloads/pubs/qiu_lane_iccs_2005.pdf","raw_type":"text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1569403765","https://openalex.org/W1647075334","https://openalex.org/W1967517087","https://openalex.org/W1971437334","https://openalex.org/W1982944995","https://openalex.org/W2017642141","https://openalex.org/W2038492783","https://openalex.org/W2041873531","https://openalex.org/W2055043387","https://openalex.org/W2089117520","https://openalex.org/W2109609799","https://openalex.org/W2116899346","https://openalex.org/W2124519945","https://openalex.org/W2128212057","https://openalex.org/W2145638174","https://openalex.org/W2148603752","https://openalex.org/W2163199119","https://openalex.org/W2170960297"],"related_works":["https://openalex.org/W3140077495","https://openalex.org/W153428622","https://openalex.org/W3144044208","https://openalex.org/W4295095065","https://openalex.org/W2981114495","https://openalex.org/W2884140292","https://openalex.org/W2073840770","https://openalex.org/W2100394661","https://openalex.org/W4239564601","https://openalex.org/W2886730640"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
