{"id":"https://openalex.org/W2037054479","doi":"https://doi.org/10.1002/meet.14504901137","title":"Using bootstrapping to identify protein locations","display_name":"Using bootstrapping to identify protein locations","publication_year":2012,"publication_date":"2012-01-01","ids":{"openalex":"https://openalex.org/W2037054479","doi":"https://doi.org/10.1002/meet.14504901137","mag":"2037054479"},"language":"en","primary_location":{"id":"doi:10.1002/meet.14504901137","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14504901137","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14504901137","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14504901137","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043442839","display_name":"Catherine Blake","orcid":"https://orcid.org/0000-0001-9516-2683"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Catherine Blake","raw_affiliation_strings":["Center for Informatics Research in Science and Scholarship (CIRSS), Graduate School of Library & Information Science, University of Illinois at Urbana Champaign, 501 E Daniel St, Champaign, Illinois 61820-6211"],"affiliations":[{"raw_affiliation_string":"Center for Informatics Research in Science and Scholarship (CIRSS), Graduate School of Library & Information Science, University of Illinois at Urbana Champaign, 501 E Daniel St, Champaign, Illinois 61820-6211","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101643829","display_name":"Zheng Wu","orcid":"https://orcid.org/0000-0002-8096-0065"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wu Zheng","raw_affiliation_strings":["Center for Informatics Research in Science and Scholarship (CIRSS), Graduate School of Library & Information Science, University of Illinois at Urbana Champaign, 501 E Daniel St, Champaign, Illinois 61820-6211"],"affiliations":[{"raw_affiliation_string":"Center for Informatics Research in Science and Scholarship (CIRSS), Graduate School of Library & Information Science, University of Illinois at Urbana Champaign, 501 E Daniel St, Champaign, Illinois 61820-6211","institution_ids":["https://openalex.org/I157725225"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5043442839"],"corresponding_institution_ids":["https://openalex.org/I157725225"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08611582,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"49","issue":"1","first_page":"1","last_page":"2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bootstrapping","display_name":"Bootstrapping (finance)","score":0.9250377416610718},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.7732419967651367},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7473664879798889},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.5042315721511841},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.49166494607925415},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4413849413394928},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43218907713890076},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4023033678531647},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.35113200545310974},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.32574883103370667},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11099761724472046},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11085116863250732},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09908273816108704},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.08572962880134583}],"concepts":[{"id":"https://openalex.org/C207609745","wikidata":"https://www.wikidata.org/wiki/Q4944086","display_name":"Bootstrapping (finance)","level":2,"score":0.9250377416610718},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.7732419967651367},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7473664879798889},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.5042315721511841},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.49166494607925415},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4413849413394928},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43218907713890076},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4023033678531647},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.35113200545310974},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.32574883103370667},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11099761724472046},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11085116863250732},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09908273816108704},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.08572962880134583},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/meet.14504901137","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14504901137","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14504901137","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1002/meet.14504901137","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14504901137","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14504901137","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.550000011920929,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2037054479.pdf","grobid_xml":"https://content.openalex.org/works/W2037054479.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W1528321674","https://openalex.org/W2097606805","https://openalex.org/W2103260426","https://openalex.org/W2114453188"],"related_works":["https://openalex.org/W24553703","https://openalex.org/W4211000692","https://openalex.org/W4212920271","https://openalex.org/W2612240612","https://openalex.org/W4324018414","https://openalex.org/W4211208250","https://openalex.org/W4211054902","https://openalex.org/W2170381940","https://openalex.org/W2472351724","https://openalex.org/W3145366215"],"abstract_inverted_index":{"Abstract":[0],"Automated":[1],"methods":[2],"that":[3,31],"leverage":[4],"both":[5],"large":[6],"quantities":[7],"of":[8,24,33,61,92,114,118,127],"text,":[9,93],"and":[10,86,100,130],"knowledge":[11,84],"resources":[12],"are":[13],"increasingly":[14],"being":[15],"used":[16,55],"to":[17,39,49,56,68,72,94,108,133,138],"identify":[18,57],"relations":[19,34,60],"from":[20,89],"the":[21,25,82,115,119],"web.":[22],"One":[23],"challenges":[26],"with":[27,135],"these":[28],"approaches":[29],"is":[30,48,64,107],"quantity":[32],"identified":[35],"makes":[36],"it":[37],"difficult":[38],"evaluate":[40],"system":[41],"performance.":[42],"Our":[43,104],"goal":[44,106],"in":[45,70,81,142],"this":[46,128],"paper":[47],"demonstrate":[50],"how":[51],"bootstrapping":[52,120,140],"can":[53],"be":[54],"subcellular":[58],"location":[59],"proteins,":[62,97],"which":[63],"a":[65,90,110],"critically":[66],"important":[67],"biologists":[69],"order":[71],"understand":[73],"protein":[74],"function.":[75],"Specifically,":[76],"we":[77],"use":[78],"protein\u2010location":[79,102],"pairs":[80],"UniProt":[83],"base":[85],"dependency":[87],"paths":[88],"collection":[91],"infer":[95],"new":[96,98,101],"locations":[99],"pairs.":[103],"second":[105],"conduct":[109],"detailed":[111],"manual":[112],"analysis":[113,124],"first":[116],"iteration":[117],"process.":[121],"Such":[122],"an":[123],"reveals":[125],"pitfalls":[126],"approach":[129],"enables":[131],"us":[132],"conclude":[134],"specific":[136],"recommendations":[137],"improve":[139],"performance":[141],"subsequent":[143],"iterations.":[144]},"counts_by_year":[],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
