{"id":"https://openalex.org/W1965572339","doi":"https://doi.org/10.1002/meet.14503901110","title":"The ambiguous bioinformatics domain: A conceptual map of information science applications for molecular biology","display_name":"The ambiguous bioinformatics domain: A conceptual map of information science applications for molecular biology","publication_year":2002,"publication_date":"2002-11-01","ids":{"openalex":"https://openalex.org/W1965572339","doi":"https://doi.org/10.1002/meet.14503901110","mag":"1965572339"},"language":"en","primary_location":{"id":"doi:10.1002/meet.14503901110","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14503901110","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14503901110","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14503901110","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045161514","display_name":"Sheila Denn","orcid":null},"institutions":[{"id":"https://openalex.org/I4210119046","display_name":"Zero to Three","ror":"https://ror.org/01qvk6016","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210119046"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sheila O. Denn","raw_affiliation_strings":["Both authors contributed equally to this work","School of Information and Library Science, University of North Carolina at Chapel Hill, CB# 3360, 100 Manning Hall, Chapel Hill, NC 27599-3360"],"affiliations":[{"raw_affiliation_string":"Both authors contributed equally to this work","institution_ids":["https://openalex.org/I4210119046"]},{"raw_affiliation_string":"School of Information and Library Science, University of North Carolina at Chapel Hill, CB# 3360, 100 Manning Hall, Chapel Hill, NC 27599-3360","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081390581","display_name":"W. John MacMullen","orcid":null},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]},{"id":"https://openalex.org/I4210119046","display_name":"Zero to Three","ror":"https://ror.org/01qvk6016","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210119046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. John MacMullen","raw_affiliation_strings":["Both authors contributed equally to this work","School of Information and Library Science, University of North Carolina at Chapel Hill, CB# 3360, 100 Manning Hall, Chapel Hill, NC 27599-3360"],"affiliations":[{"raw_affiliation_string":"Both authors contributed equally to this work","institution_ids":["https://openalex.org/I4210119046"]},{"raw_affiliation_string":"School of Information and Library Science, University of North Carolina at Chapel Hill, CB# 3360, 100 Manning Hall, Chapel Hill, NC 27599-3360","institution_ids":["https://openalex.org/I114027177"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5045161514"],"corresponding_institution_ids":["https://openalex.org/I114027177","https://openalex.org/I4210119046"],"apc_list":null,"apc_paid":null,"fwci":0.4449,"has_fulltext":false,"cited_by_count":6,"citation_normalized_percentile":{"value":0.59155781,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"39","issue":"1","first_page":"556","last_page":"558"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9916999936103821,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.6759079098701477},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5616844296455383},{"id":"https://openalex.org/keywords/information-science","display_name":"Information science","score":0.5471722483634949},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5463684797286987},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.47718489170074463},{"id":"https://openalex.org/keywords/presentation","display_name":"Presentation (obstetrics)","score":0.46154314279556274},{"id":"https://openalex.org/keywords/ambiguity","display_name":"Ambiguity","score":0.4398502707481384},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32643330097198486},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2580639123916626},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.11670944094657898},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10962224006652832}],"concepts":[{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.6759079098701477},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5616844296455383},{"id":"https://openalex.org/C95831776","wikidata":"https://www.wikidata.org/wiki/Q16387","display_name":"Information science","level":2,"score":0.5471722483634949},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5463684797286987},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.47718489170074463},{"id":"https://openalex.org/C2777601897","wikidata":"https://www.wikidata.org/wiki/Q3409113","display_name":"Presentation (obstetrics)","level":2,"score":0.46154314279556274},{"id":"https://openalex.org/C2780522230","wikidata":"https://www.wikidata.org/wiki/Q1140419","display_name":"Ambiguity","level":2,"score":0.4398502707481384},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32643330097198486},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2580639123916626},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.11670944094657898},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10962224006652832},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/meet.14503901110","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14503901110","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14503901110","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1002/meet.14503901110","is_oa":true,"landing_page_url":"https://doi.org/10.1002/meet.14503901110","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/meet.14503901110","source":{"id":"https://openalex.org/S4306523999","display_name":"Proceedings of the American Society for Information Science and Technology","issn_l":"1550-8390","issn":["1550-8390","1936-1734"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings of the American Society for Information Science and Technology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W1965572339.pdf"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1544923801","https://openalex.org/W1838954350","https://openalex.org/W2044751967","https://openalex.org/W2045786312","https://openalex.org/W2058221907","https://openalex.org/W2072897447","https://openalex.org/W2089177530","https://openalex.org/W2106093878","https://openalex.org/W2107247043","https://openalex.org/W2116112084","https://openalex.org/W2161163941","https://openalex.org/W2169480034","https://openalex.org/W2338220684","https://openalex.org/W2913629091","https://openalex.org/W3216833688","https://openalex.org/W4234231267","https://openalex.org/W4246066782"],"related_works":["https://openalex.org/W2353179089","https://openalex.org/W2923538289","https://openalex.org/W2353125546","https://openalex.org/W2470643824","https://openalex.org/W4387426029","https://openalex.org/W2349635380","https://openalex.org/W3087523398","https://openalex.org/W2921014946","https://openalex.org/W2301406087","https://openalex.org/W2347433835"],"abstract_inverted_index":{"While":[0,416],"bioinformatics":[1,61,84,205],"has":[2,20,177],"generated":[3],"a":[4,34,53,102,111,287,291,298,460,463],"great":[5],"deal":[6],"of":[7,36,56,67,83,88,105,114,123,159,173,199,204,212,220,229,265,290,389,406,459,466,486,513],"study":[8],"within":[9,472],"both":[10],"the":[11,29,65,68,81,170,195,218,227,336,341,357,363,428,451,455,484,511],"molecular":[12,91,119,292,407,473],"biology":[13,71,92,293,408],"and":[14,64,85,125,140,147,156,181,191,197,215,223,238,244,253,263,270,276,278,310,318,332,411,422,457,489,494,515,520,542],"computer":[15],"science":[16,107,196,208,214,231,250,413,468],"research":[17,24,108,246],"communities,":[18],"there":[19,32],"been":[21],"relatively":[22],"little":[23],"in":[25,51,70,90,118,189,248,333,401,417,427,450],"information":[26,40,98,106,207,213,230,249,260,266,412,467,548],"science,":[27],"despite":[28],"fact":[30],"that":[31,48,72,93,387],"are":[33,308,312,324,470],"number":[35],"clear":[37],"opportunities":[38],"for":[39,149,206,437,491,517],"scientists":[41],"to":[42,59,79,110,127,151,193,217,346,356,381,397,439,444,546],"make":[43],"significant":[44],"contributions.":[45],"We":[46,100,282],"believe":[47],"this":[49,352],"is":[50,187,305,330,338,433],"part":[52],"direct":[54],"result":[55],"uncertainty":[57],"as":[58,133,185,320],"what":[60],"actually":[62],"is,":[63],"nature":[66],"problems":[69,89],"could":[73],"be":[74,95,425,480],"addressed.":[75],"This":[76],"presentation":[77],"seeks":[78],"reduce":[80],"ambiguity":[82],"enumerate":[86],"classes":[87],"can":[94,479],"addressed":[96],"by":[97,233,340],"scientists.":[99],"provide":[101,367],"conceptual":[103],"mapping":[104],"areas":[109,247],"generalized":[112,288],"model":[113,289],"an":[115,201,303],"experimental":[116,294,409,430],"cycle":[117,410],"biology,":[120],"providing":[121],"granularity":[122,369],"sub-tasks":[124],"citations":[126,396],"specific":[128,398,448],"application":[129,211,512],"examples.":[130],"Sciences":[131],"such":[132],"physics":[134],"(Siegfried,":[135],"2000),":[136],"chemistry":[137],"(Paris,":[138],"1997)":[139],"astronomy":[141],"(Poin\u00e7ot,":[142],"2000)":[143],"have":[144,165,385,394],"used":[145,188],"computers":[146],"informatics":[148],"decades":[150],"manage":[152],"data,":[153],"create":[154],"models,":[155],"perform":[157],"simulations":[158],"complex":[160],"systems.":[161],"The":[162,322],"life":[163],"sciences":[164],"also":[166],"employed":[167],"computers,":[168],"but":[169,379],"recent":[171],"development":[172,485],"high-throughput":[174],"genome":[175],"sequencing":[176],"accelerated":[178],"their":[179],"needs":[180],"uses.":[182],"Using":[183],"\u2018informatics\u2019":[184],"it":[186,432],"Europe":[190],"Asia":[192],"denote":[194],"technology":[198,216],"information,":[200],"operational":[202],"definition":[203],"is:":[209],"\u201cthe":[210],"management":[219],"biomedical":[221],"data":[222,272,311,323,496],"information.\u201d":[224],"Building":[225],"upon":[226,454],"categorizations":[228],"(IS)":[232],"White":[234],"&":[235,527,557],"McCain":[236],"(1998)":[237],"Saracevic":[239],"(1999),":[240],"we":[241,366,384,393],"grouped":[242],"basic":[243],"applied":[245],"into":[251],"four":[252],"five":[254],"broad":[255,464],"categories,":[256],"respectively:":[257],"domain":[258],"analysis,":[259],"use,":[261],"communication,":[262],"theories":[264],"(basic);":[267],"systems":[268],"analysis":[269],"design,":[271],"modeling,":[273],"classification,":[274],"storage":[275],"retrieval,":[277],"human-computer":[279],"interaction":[280],"(applied).":[281],"mapped":[283],"these":[284,477],"concepts":[285,359],"onto":[286],"cycle.":[295,452],"Beginning":[296],"with":[297,354],"defined":[299],"problem":[300],"or":[301,328,343],"question,":[302],"experiment":[304,337],"designed,":[306],"samples":[307],"prepared,":[309],"acquired":[313],"through":[314],"contextually":[315],"appropriate":[316],"methods":[317,490,516],"transformed":[319],"needed.":[321],"analyzed,":[325],"often":[326],"modeling":[327],"simulation":[329],"performed,":[331],"many":[334],"cases":[335,419],"repeated":[339],"same":[342],"different":[344],"investigator":[345],"insure":[347],"accuracy.":[348],"Figure":[349],"1":[350],"illustrates":[351],"process":[353],"mappings":[355],"IS":[358,372,420],"described":[360],"above.":[361],"On":[362],"poster":[364],"itself":[365],"more":[368,435],"on":[370,441],"particular":[371,461],"subcategories":[373],"(e.g.,":[374],"metadata":[375],"frameworks":[376],"under":[377],"Classification),":[378],"due":[380],"space":[382],"considerations":[383],"omitted":[386],"level":[388],"detail":[390],"here.":[391],"Instead,":[392],"provided":[395],"examples,":[399],"discussed":[400],"Section":[402],"4.":[403],"Conceptual":[404],"map":[405],"insertion":[414],"points":[415,449],"some":[418],"researchers":[421],"practitioners":[423],"may":[424],"involved":[426],"complete":[429],"cycle,":[431],"currently":[434],"common":[436],"them":[438],"take":[440],"consulting":[442],"roles":[443],"apply":[445],"expertise":[446],"at":[447],"Depending":[453],"interests":[456],"experience":[458],"investigator,":[462],"range":[465],"activities":[469,478],"possible":[471],"biology.":[474],"In":[475],"general,":[476],"classified":[481],"as:":[482],"(a)":[483],"new":[487],"tools":[488,514],"managing,":[492],"integrating,":[493],"visualizing":[495],"(Brazma,":[497],"2001;":[498,501,533,537],"GO":[499],"Consortium,":[500],"NAR,":[502],"2002;":[503,505,539,551],"NCBI,":[504],"Paris,":[506],"1997;":[507,525,529],"Searls,":[508],"2000);":[509,541],"(b)":[510],"integration,":[518],"inference,":[519],"discovery":[521],"(Chen,":[522],"et.":[523,531,535,553],"al.":[524,532,554],"Corruble":[526],"Ganascia,":[528],"Juvan,":[530],"Karp,":[534],"al.,":[536],"Raychaudhuri,":[538],"Wise,":[540],"(c)":[543],"theoretical":[544],"approaches":[545],"biological":[547],"(de":[549],"Jong,":[550],"Poin\u00e7ot,":[552],"2000;":[555],"Smalheiser":[556],"Swanson,":[558],"1996).":[559]},"counts_by_year":[{"year":2014,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
