{"id":"https://openalex.org/W7118842539","doi":"https://doi.org/10.1002/cpe.70551","title":"From Global to Local: A Dependency and Semantic Integration\u2010Based Document\u2010Level Biomedical Relation Extraction Method","display_name":"From Global to Local: A Dependency and Semantic Integration\u2010Based Document\u2010Level Biomedical Relation Extraction Method","publication_year":2026,"publication_date":"2026-01-01","ids":{"openalex":"https://openalex.org/W7118842539","doi":"https://doi.org/10.1002/cpe.70551"},"language":"en","primary_location":{"id":"doi:10.1002/cpe.70551","is_oa":false,"landing_page_url":"https://doi.org/10.1002/cpe.70551","pdf_url":null,"source":{"id":"https://openalex.org/S11065456","display_name":"Concurrency and Computation Practice and Experience","issn_l":"1532-0626","issn":["1532-0626","1532-0634"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Concurrency and Computation: Practice and Experience","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5122276133","display_name":"Bin Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Zhou","raw_affiliation_strings":["School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China","institution_ids":["https://openalex.org/I119203015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5122076873","display_name":"Qingchuan Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingchuan Xu","raw_affiliation_strings":["School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China","institution_ids":["https://openalex.org/I119203015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5122255022","display_name":"Kai Che","orcid":null},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]},{"id":"https://openalex.org/I4210133467","display_name":"Xi'an Aeronautical University","ror":"https://ror.org/03qn8zy63","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210133467"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kai Che","raw_affiliation_strings":["School of Agricultural Engineering and Food Science Shandong University of Technology  Zibo Shandong China","Xi'an Aeronautics Computing Technique Research Institute  Xi'an China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Agricultural Engineering and Food Science Shandong University of Technology  Zibo Shandong China","institution_ids":["https://openalex.org/I119203015"]},{"raw_affiliation_string":"Xi'an Aeronautics Computing Technique Research Institute  Xi'an China","institution_ids":["https://openalex.org/I4210133467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103171929","display_name":"Longbo Zhang","orcid":"https://orcid.org/0000-0002-9077-3239"},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Longbo Zhang","raw_affiliation_strings":["School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China","institution_ids":["https://openalex.org/I119203015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084979933","display_name":"Hongzhen Cai","orcid":null},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongzhen Cai","raw_affiliation_strings":["School of Computer Science Northwestern Polytechnical University  Xi'an China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science Northwestern Polytechnical University  Xi'an China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5122108247","display_name":"Linlin Xing","orcid":null},"institutions":[{"id":"https://openalex.org/I119203015","display_name":"Shandong University of Technology","ror":"https://ror.org/02mr3ar13","country_code":"CN","type":"education","lineage":["https://openalex.org/I119203015"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Linlin Xing","raw_affiliation_strings":["School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China"],"raw_orcid":"https://orcid.org/0000-0002-2345-0026","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology Shandong University of Technology  Zibo Shandong China","institution_ids":["https://openalex.org/I119203015"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5122108247"],"corresponding_institution_ids":["https://openalex.org/I119203015"],"apc_list":{"value":4740,"currency":"USD","value_usd":4740},"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.02663361,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"38","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.28529998660087585,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.28529998660087585,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.23280000686645508,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11719","display_name":"Data Quality and Management","score":0.10350000113248825,"subfield":{"id":"https://openalex.org/subfields/1803","display_name":"Management Science and Operations Research"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.7229999899864197},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6449999809265137},{"id":"https://openalex.org/keywords/dependency","display_name":"Dependency (UML)","score":0.5974000096321106},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5356000065803528},{"id":"https://openalex.org/keywords/semantics","display_name":"Semantics (computer science)","score":0.4392000138759613},{"id":"https://openalex.org/keywords/automation","display_name":"Automation","score":0.40049999952316284},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.39149999618530273}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8586999773979187},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.7229999899864197},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6449999809265137},{"id":"https://openalex.org/C19768560","wikidata":"https://www.wikidata.org/wiki/Q320727","display_name":"Dependency (UML)","level":2,"score":0.5974000096321106},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5356000065803528},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45969998836517334},{"id":"https://openalex.org/C184337299","wikidata":"https://www.wikidata.org/wiki/Q1437428","display_name":"Semantics (computer science)","level":2,"score":0.4392000138759613},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43860000371932983},{"id":"https://openalex.org/C115901376","wikidata":"https://www.wikidata.org/wiki/Q184199","display_name":"Automation","level":2,"score":0.40049999952316284},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.39149999618530273},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3686999976634979},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.34209999442100525},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.31119999289512634},{"id":"https://openalex.org/C2988080768","wikidata":"https://www.wikidata.org/wiki/Q7095057","display_name":"Semantic relation","level":3,"score":0.3052000105381012},{"id":"https://openalex.org/C90312973","wikidata":"https://www.wikidata.org/wiki/Q7449052","display_name":"Semantic data model","level":2,"score":0.2831000089645386},{"id":"https://openalex.org/C2987255567","wikidata":"https://www.wikidata.org/wiki/Q33002955","display_name":"Knowledge graph","level":2,"score":0.2728999853134155},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2709999978542328},{"id":"https://openalex.org/C2779304628","wikidata":"https://www.wikidata.org/wiki/Q3503480","display_name":"Face (sociological concept)","level":2,"score":0.25040000677108765}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1002/cpe.70551","is_oa":false,"landing_page_url":"https://doi.org/10.1002/cpe.70551","pdf_url":null,"source":{"id":"https://openalex.org/S11065456","display_name":"Concurrency and Computation Practice and Experience","issn_l":"1532-0626","issn":["1532-0626","1532-0634"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Concurrency and Computation: Practice and Experience","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3199527102","display_name":null,"funder_award_id":"62202373","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7930901744","display_name":null,"funder_award_id":"62002206","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":39,"referenced_works":["https://openalex.org/W2346452181","https://openalex.org/W2513378248","https://openalex.org/W2759211898","https://openalex.org/W2892094955","https://openalex.org/W2920198243","https://openalex.org/W2952768212","https://openalex.org/W2953356739","https://openalex.org/W2963014179","https://openalex.org/W2966874979","https://openalex.org/W2970986510","https://openalex.org/W2984452801","https://openalex.org/W3046375318","https://openalex.org/W3086837474","https://openalex.org/W3093891978","https://openalex.org/W3101327207","https://openalex.org/W3101748173","https://openalex.org/W3102663935","https://openalex.org/W3103836967","https://openalex.org/W3113440918","https://openalex.org/W3118018449","https://openalex.org/W3173229273","https://openalex.org/W3174111043","https://openalex.org/W3175344781","https://openalex.org/W3213921583","https://openalex.org/W4205983734","https://openalex.org/W4224308101","https://openalex.org/W4281639669","https://openalex.org/W4285151007","https://openalex.org/W4320731355","https://openalex.org/W4385573991","https://openalex.org/W4385574161","https://openalex.org/W4386824989","https://openalex.org/W4387826716","https://openalex.org/W4389328565","https://openalex.org/W4389611218","https://openalex.org/W4391912342","https://openalex.org/W4392282268","https://openalex.org/W4403296891","https://openalex.org/W4406901692"],"related_works":[],"abstract_inverted_index":{"ABSTRACT":[0],"Document":[1],"level":[2],"biomedical":[3,15,202],"relation":[4,144,150,203],"extraction":[5],"aims":[6],"to":[7,41,55,60,68,100,133],"identify":[8],"complex":[9,70,103],"relationships":[10],"between":[11,105],"entity":[12],"pairs":[13],"in":[14],"literature,":[16],"which":[17],"is":[18,54],"crucial":[19],"for":[20,208],"the":[21,66,109,115,130,142,148,160,165,178,187,196],"automation":[22],"of":[23,51,181,200],"medical":[24],"knowledge":[25],"applications.":[26,210],"Existing":[27],"methods":[28],"face":[29],"limitations":[30],"when":[31],"handling":[32],"non\u2010local":[33],"and":[34,64,147,175,183,186,198],"multi\u2010layered":[35],"semantic":[36,85],"dependencies,":[37],"making":[38],"it":[39,95],"difficult":[40],"effectively":[42,194],"integrate":[43],"global":[44,80,182],"semantics":[45],"with":[46,83,124],"local":[47,184],"interactions.":[48],"The":[49,153],"goal":[50],"this":[52,62],"study":[53],"propose":[56],"a":[57,75,91],"novel":[58],"model":[59,69,77,102,140,158,193],"address":[61],"issue":[63],"enhance":[65],"ability":[67,132],"dependencies.":[71,136],"This":[72],"paper":[73],"proposes":[74],"new":[76],"that":[78,156],"combines":[79],"dependency":[81],"graphs":[82,87],"multi\u2010level":[84],"information":[86,99,185],"(DMK).":[88],"By":[89],"utilizing":[90],"dual\u2010graph":[92],"collaborative":[93,179],"mechanism,":[94],"integrates":[96],"document\u2010level":[97,201],"contextual":[98],"accurately":[101],"dependencies":[104],"entities.":[106],"We":[107,137],"introduce":[108],"KanChebConv":[110],"convolutional":[111,190],"layer":[112],"based":[113],"on":[114,141,168],"Kolmogorov\u2013Arnold":[116],"Network":[117],"(KAN),":[118],"replacing":[119],"traditional":[120],"linear":[121],"weight":[122],"matrices":[123],"learnable":[125],"spline":[126],"functions,":[127],"thereby":[128,171],"enhancing":[129],"model's":[131],"capture":[134],"non\u2010linear":[135],"evaluated":[138],"our":[139,157,192],"chemical\u2013disease":[143],"(CDR)":[145],"dataset":[146],"gene\u2013disease":[149],"(GDA)":[151],"dataset.":[152],"results":[154],"demonstrate":[155],"achieved":[159],"highest":[161],"F1":[162],"score":[163],"among":[164],"selected":[166],"baselines":[167],"both":[169],"datasets,":[170],"validating":[172],"its":[173],"robustness":[174,199],"competitiveness.":[176],"Through":[177],"mechanism":[180],"innovative":[188],"KAN":[189],"layer,":[191],"improves":[195],"accuracy":[197],"extraction,":[204],"showcasing":[205],"strong":[206],"potential":[207],"practical":[209]},"counts_by_year":[],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2026-01-08T00:00:00"}
