{"id":"https://openalex.org/W4385484243","doi":"https://doi.org/10.1002/aisy.202300185","title":"SSRNet: A Deep Learning Network via Spatial\u2010Based Super\u2010resolution Reconstruction for Cell Counting and Segmentation","display_name":"SSRNet: A Deep Learning Network via Spatial\u2010Based Super\u2010resolution Reconstruction for Cell Counting and Segmentation","publication_year":2023,"publication_date":"2023-08-01","ids":{"openalex":"https://openalex.org/W4385484243","doi":"https://doi.org/10.1002/aisy.202300185"},"language":"en","primary_location":{"id":"doi:10.1002/aisy.202300185","is_oa":true,"landing_page_url":"https://doi.org/10.1002/aisy.202300185","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/aisy.202300185","source":{"id":"https://openalex.org/S4210212817","display_name":"Advanced Intelligent Systems","issn_l":"2640-4567","issn":["2640-4567"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advanced Intelligent Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/aisy.202300185","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5006018583","display_name":"Lijia Deng","orcid":"https://orcid.org/0000-0003-0158-7694"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Lijia Deng","raw_affiliation_strings":["School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024753869","display_name":"Qinghua Zhou","orcid":"https://orcid.org/0000-0002-3327-0440"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Qinghua Zhou","raw_affiliation_strings":["School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007987858","display_name":"Shuihua Wang\u200e","orcid":"https://orcid.org/0000-0003-4713-2791"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Shuihua Wang","raw_affiliation_strings":["School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100434437","display_name":"Yudong Zhang","orcid":"https://orcid.org/0000-0002-4870-1493"},"institutions":[{"id":"https://openalex.org/I153648349","display_name":"University of Leicester","ror":"https://ror.org/04h699437","country_code":"GB","type":"education","lineage":["https://openalex.org/I153648349"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Yudong Zhang","raw_affiliation_strings":["School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK"],"raw_orcid":"https://orcid.org/0000-0002-4870-1493","affiliations":[{"raw_affiliation_string":"School of Computing and Mathematical Sciences University of Leicester  Leicester LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]},{"raw_affiliation_string":"School of Computing and Mathematical Sciences, University of Leicester, Leicester, LE1 7RH UK","institution_ids":["https://openalex.org/I153648349"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5100434437"],"corresponding_institution_ids":["https://openalex.org/I153648349"],"apc_list":{"value":3190,"currency":"USD","value_usd":3190},"apc_paid":{"value":3190,"currency":"USD","value_usd":3190},"fwci":0.9901,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.80788408,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"5","issue":"10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upsampling","display_name":"Upsampling","score":0.8880537748336792},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.706843376159668},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7044728994369507},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.645837664604187},{"id":"https://openalex.org/keywords/cell-counting","display_name":"Cell counting","score":0.5384284257888794},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5060781836509705},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.48734888434410095},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.485462486743927},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3519768714904785},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1798185408115387}],"concepts":[{"id":"https://openalex.org/C110384440","wikidata":"https://www.wikidata.org/wiki/Q1143270","display_name":"Upsampling","level":3,"score":0.8880537748336792},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.706843376159668},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7044728994369507},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.645837664604187},{"id":"https://openalex.org/C2583947","wikidata":"https://www.wikidata.org/wiki/Q5058179","display_name":"Cell counting","level":4,"score":0.5384284257888794},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5060781836509705},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.48734888434410095},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.485462486743927},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3519768714904785},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1798185408115387},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C29537977","wikidata":"https://www.wikidata.org/wiki/Q188941","display_name":"Cell cycle","level":3,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1002/aisy.202300185","is_oa":true,"landing_page_url":"https://doi.org/10.1002/aisy.202300185","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/aisy.202300185","source":{"id":"https://openalex.org/S4210212817","display_name":"Advanced Intelligent Systems","issn_l":"2640-4567","issn":["2640-4567"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advanced Intelligent Systems","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:7cc7b1088fb140159b9f2397dab6c2d9","is_oa":true,"landing_page_url":"https://doaj.org/article/7cc7b1088fb140159b9f2397dab6c2d9","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Advanced Intelligent Systems, Vol 5, Iss 10, Pp n/a-n/a (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1002/aisy.202300185","is_oa":true,"landing_page_url":"https://doi.org/10.1002/aisy.202300185","pdf_url":"https://onlinelibrary.wiley.com/doi/pdfdirect/10.1002/aisy.202300185","source":{"id":"https://openalex.org/S4210212817","display_name":"Advanced Intelligent Systems","issn_l":"2640-4567","issn":["2640-4567"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Advanced Intelligent Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Decent work and economic growth","score":0.5899999737739563,"id":"https://metadata.un.org/sdg/8"}],"awards":[{"id":"https://openalex.org/G2857002717","display_name":null,"funder_award_id":"RM60G0680","funder_id":"https://openalex.org/F4320314494","funder_display_name":"Hope Foundation"},{"id":"https://openalex.org/G3398780802","display_name":null,"funder_award_id":"RP202G0230","funder_id":"https://openalex.org/F4320319992","funder_display_name":"British Heart Foundation"},{"id":"https://openalex.org/G4028351360","display_name":null,"funder_award_id":"RP202G0230","funder_id":"https://openalex.org/F4320314494","funder_display_name":"Hope Foundation"},{"id":"https://openalex.org/G4821372745","display_name":null,"funder_award_id":"MC_PC_17171","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G5156659600","display_name":null,"funder_award_id":"RM60G0680","funder_id":"https://openalex.org/F4320319992","funder_display_name":"British Heart Foundation"},{"id":"https://openalex.org/G5499304554","display_name":null,"funder_award_id":"MC_PC_17171","funder_id":"https://openalex.org/F4320319992","funder_display_name":"British Heart Foundation"},{"id":"https://openalex.org/G5775540526","display_name":null,"funder_award_id":"RM32G0178B8","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5787230441","display_name":null,"funder_award_id":"RM60G0680","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G6117886397","display_name":null,"funder_award_id":"RP202G0230","funder_id":"https://openalex.org/F4320320006","funder_display_name":"Royal Society"},{"id":"https://openalex.org/G7497509230","display_name":null,"funder_award_id":"RP202G0230","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7965435125","display_name":"Accelerator Award","funder_award_id":"AA/18/3/34220","funder_id":"https://openalex.org/F4320319992","funder_display_name":"British Heart Foundation"},{"id":"https://openalex.org/G8583812621","display_name":null,"funder_award_id":"MC_PC_17171","funder_id":"https://openalex.org/F4320314494","funder_display_name":"Hope Foundation"}],"funders":[{"id":"https://openalex.org/F4320314494","display_name":"Hope Foundation","ror":"https://ror.org/05wf1w785"},{"id":"https://openalex.org/F4320319992","display_name":"British Heart Foundation","ror":"https://ror.org/02wdwnk04"},{"id":"https://openalex.org/F4320320006","display_name":"Royal Society","ror":"https://ror.org/03wnrjx87"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4385484243.pdf"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W1885185971","https://openalex.org/W1901129140","https://openalex.org/W1968134962","https://openalex.org/W2019062120","https://openalex.org/W2036329542","https://openalex.org/W2149251234","https://openalex.org/W2166535756","https://openalex.org/W2267374750","https://openalex.org/W2293078015","https://openalex.org/W2293083603","https://openalex.org/W2347064614","https://openalex.org/W2395611524","https://openalex.org/W2463631526","https://openalex.org/W2520304734","https://openalex.org/W2780740184","https://openalex.org/W2900936384","https://openalex.org/W2927980542","https://openalex.org/W2943196448","https://openalex.org/W2969585684","https://openalex.org/W2975180264","https://openalex.org/W2975634117","https://openalex.org/W2975932043","https://openalex.org/W2983341131","https://openalex.org/W2983488121","https://openalex.org/W2984556841","https://openalex.org/W2990306149","https://openalex.org/W3004370189","https://openalex.org/W3005933855","https://openalex.org/W3031815162","https://openalex.org/W3103117538","https://openalex.org/W3111142877","https://openalex.org/W3169116089","https://openalex.org/W4214513770","https://openalex.org/W4221103716","https://openalex.org/W4285600754","https://openalex.org/W4311716563","https://openalex.org/W4378619666"],"related_works":["https://openalex.org/W2062399876","https://openalex.org/W2607795551","https://openalex.org/W3155117723","https://openalex.org/W1991429770","https://openalex.org/W1983892167","https://openalex.org/W2281134365","https://openalex.org/W4310746709","https://openalex.org/W4385574037","https://openalex.org/W4315434538","https://openalex.org/W1505801252"],"abstract_inverted_index":{"Cell":[0],"counting":[1,16,29,37,59,78,86,264,298],"and":[2,9,20,43,47,69,98,121,163,178,182,200,210,216,250,265,299],"segmentation":[3,266,300],"are":[4,17,67],"critical":[5],"tasks":[6],"in":[7,262,283],"biology":[8],"medicine.":[10],"The":[11,82,268,302],"traditional":[12,228],"methods":[13,30],"for":[14,109,159,276],"cell":[15,28,41,44,52,85,95,99,119,124,263,282,297],"labor\u2010intensive,":[18],"time\u2010consuming,":[19],"prone":[21],"to":[22,71],"human":[23],"errors.":[24],"Recently,":[25],"deep":[26,106,170],"learning\u2010based":[27],"have":[31],"become":[32],"a":[33,105,150,289],"trend,":[34],"including":[35],"point\u2010based":[36,58],"methods,":[38],"such":[39,50],"as":[40,51],"detection":[42],"density":[45],"prediction,":[46],"non\u2010point\u2010based":[48],"counting,":[49,272],"number":[53,96,213],"regression":[54],"prediction.":[55,101],"However,":[56],"the":[57,74,118,123,130,143,169,193,211,227,234,237,245,248,257,274,284],"method":[60,258,269],"heavily":[61],"relies":[62],"on":[63,296,306],"well\u2010annotated":[64],"datasets,":[65],"which":[66,166],"scarce":[68],"difficult":[70],"obtain.":[72],"On":[73],"other":[75],"hand,":[76],"nonpoint\u2010based":[77,271],"is":[79,93,114,139,157,203,219,304],"less":[80],"interpretable.":[81],"task":[83],"of":[84,145,206,208,214,221,223,236,247,280],"by":[87,173],"dividing":[88],"it":[89,291],"into":[90],"two":[91],"subtasks":[92],"approached:":[94],"prediction":[97],"distribution":[100,125],"To":[102,127],"accomplish":[103],"this,":[104],"learning":[107],"network":[108,249],"spatial\u2010based":[110,151],"super\u2010resolution":[111,152],"reconstruction":[112],"(SSRNet)":[113],"proposed":[115,140,158],"that":[116,141,207,222,256],"predicts":[117],"count":[120],"segments":[122],"contour.":[126],"effectively":[128],"train":[129],"model,":[131],"an":[132,187],"optimized":[133,188],"multitask":[134],"loss":[135],"function":[136],"(OM":[137],"loss)":[138],"coordinates":[142],"training":[144],"multiple":[146],"tasks.":[147,267,301],"In":[148],"SSRNet,":[149],"fast":[153,183],"upsampling":[154,235],"module":[155],"(SSR\u2010upsampling)":[156],"feature":[160,171],"map":[161,172],"enhancement":[162],"one\u2010step":[164],"upsampling,":[165],"can":[167,232],"enlarge":[168],"32":[174],"times":[175],"without":[176],"blurring":[177],"achieves":[179,259,270],"fine\u2010grained":[180],"detail":[181],"processing.":[184],"SSRNet":[185],"uses":[186],"encoder":[189],"network.":[190],"Compared":[191,225],"with":[192,226],"classic":[194],"U\u2010Net,":[195,209],"SSRNet's":[196],"running":[197],"memory":[198],"read":[199],"write":[201],"consumption":[202],"only":[204],"1/10":[205],"total":[212],"multiply":[215],"add":[217],"calculations":[218],"1/20":[220],"U\u2010Net.":[224],"sampling":[229],"method,":[230],"SSR\u2010upsampling":[231],"complete":[233],"entire":[238],"decoder":[239],"stage":[240],"at":[241],"one":[242],"time,":[243],"reducing":[244],"complexity":[246],"achieving":[251],"better":[252],"performance.":[253],"Experiments":[254],"demonstrate":[255],"state\u2010of\u2010the\u2010art":[260],"performance":[261,295],"eliminating":[273],"need":[275],"exact":[277],"position":[278],"annotation":[279],"each":[281],"image":[285],"during":[286],"training.":[287],"As":[288],"result,":[290],"has":[292],"demonstrated":[293],"excellent":[294],"code":[303],"public":[305],"GitHub":[307],"(https://github.com/Roin626/SSRnet).":[308]},"counts_by_year":[{"year":2025,"cited_by_count":4}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
