{"id":"https://openalex.org/W96199840","doi":null,"title":"Genetic Linkage and Quantitative Trait Loci (QTL) Mapping in Hevea-Latex Timber Clones","display_name":"Genetic Linkage and Quantitative Trait Loci (QTL) Mapping in Hevea-Latex Timber Clones","publication_year":2011,"publication_date":"2011-08-01","ids":{"openalex":"https://openalex.org/W96199840","mag":"96199840"},"language":"en","primary_location":{"id":"pmh:oai:psasir.upm.edu.my:20018","doi":null,"is_oa":true,"landing_page_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","pdf_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","source":{"id":"https://openalex.org/S4377196260","display_name":"Universiti Putra Malaysia Institutional Repository (Universiti Putra Malaysia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I130343225","host_organization_name":"Universiti Putra Malaysia","host_organization_lineage":["https://openalex.org/I130343225"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Thesis"},"volume":null,"type":"dissertation","is_traditional":true,"indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048968050","display_name":"Safiah Atan","orcid":"https://orcid.org/0000-0002-4687-9271","observed_orcids":["https://orcid.org/0000-0002-4687-9271"]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Safiah Atan","raw_affiliation_strings":[],"raw_orcid":"https://orcid.org/0000-0002-4687-9271","affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5048968050"],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.0026000000070780516,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hevea-brasiliensis","display_name":"Hevea brasiliensis","score":0.9980000257492065},{"id":"https://openalex.org/keywords/linkage-map","display_name":"genetic linkage map","score":0.6940000057220459},{"id":"https://openalex.org/keywords/quantitative-trait-loci","display_name":"quantitative trait loci","score":0.9319999814033508},{"id":"https://openalex.org/keywords/corynespora-cassiicola","display_name":"Corynespora cassiicola","score":0.8209999799728394},{"id":"https://openalex.org/keywords/disease-susceptibility","display_name":"disease susceptibility","score":0.4959999918937683},{"id":"https://openalex.org/keywords/aflp-markers","display_name":"AFLP markers","score":0.6710000038146973},{"id":"https://openalex.org/keywords/linkage-groups","display_name":"linkage groups","score":0.5350000262260437},{"id":"https://openalex.org/keywords/genetic-diversity","display_name":"genetic diversity","score":0.36000001430511475},{"id":"https://openalex.org/keywords/inbreeding-depression","display_name":"inbreeding depression","score":0.7170000076293945},{"id":"https://openalex.org/keywords/rubber-latex","display_name":"rubber latex","score":0.3529999852180481},{"id":"https://openalex.org/keywords/rrim-600","display_name":"RRIM 600","score":0.8859999775886536}],"concepts":[{"id":"https://openalex.org/C2779539549","wikidata":"https://www.wikidata.org/wiki/Q156538","display_name":"Hevea brasiliensis","level":3,"score":0.8845751881599426},{"id":"https://openalex.org/C2780034618","wikidata":"https://www.wikidata.org/wiki/Q2350189","display_name":"Hevea","level":4,"score":0.8641699552536011},{"id":"https://openalex.org/C153523973","wikidata":"https://www.wikidata.org/wiki/Q292077","display_name":"Amplified fragment length polymorphism","level":4,"score":0.8079584836959839},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7383989095687866},{"id":"https://openalex.org/C1244910","wikidata":"https://www.wikidata.org/wiki/Q1481109","display_name":"Inbreeding depression","level":4,"score":0.5143967270851135},{"id":"https://openalex.org/C190789776","wikidata":"https://www.wikidata.org/wiki/Q767511","display_name":"Genetic marker","level":3,"score":0.5049794316291809},{"id":"https://openalex.org/C81941488","wikidata":"https://www.wikidata.org/wiki/Q853421","display_name":"Quantitative trait locus","level":3,"score":0.45829543471336365},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.43018966913223267},{"id":"https://openalex.org/C142870003","wikidata":"https://www.wikidata.org/wiki/Q843863","display_name":"Genetic linkage","level":3,"score":0.42877453565597534},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.38615652918815613},{"id":"https://openalex.org/C144027150","wikidata":"https://www.wikidata.org/wiki/Q48803","display_name":"Horticulture","level":1,"score":0.3354911804199219},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32010090351104736},{"id":"https://openalex.org/C2777782036","wikidata":"https://www.wikidata.org/wiki/Q38978","display_name":"Inbreeding","level":3,"score":0.3071134388446808},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.18068170547485352},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.1684376299381256},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13703516125679016},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.07892307639122009},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C176933379","wikidata":"https://www.wikidata.org/wiki/Q131877","display_name":"Natural rubber","level":2,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"pmh:oai:psasir.upm.edu.my:20018","doi":null,"is_oa":true,"landing_page_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","pdf_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","source":{"id":"https://openalex.org/S4377196260","display_name":"Universiti Putra Malaysia Institutional Repository (Universiti Putra Malaysia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I130343225","host_organization_name":"Universiti Putra Malaysia","host_organization_lineage":["https://openalex.org/I130343225"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Thesis"},{"id":"mag:96199840","doi":null,"is_oa":false,"landing_page_url":"http://psasir.upm.edu.my/id/eprint/20018/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:psasir.upm.edu.my:20018","doi":null,"is_oa":true,"landing_page_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","pdf_url":"http://psasir.upm.edu.my/id/eprint/20018/2/FH_2011_8_ir.pdf","source":{"id":"https://openalex.org/S4377196260","display_name":"Universiti Putra Malaysia Institutional Repository (Universiti Putra Malaysia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I130343225","host_organization_name":"Universiti Putra Malaysia","host_organization_lineage":["https://openalex.org/I130343225"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Thesis"},"sustainable_development_goals":[{"display_name":"Zero hunger","score":0.6735000014305115,"id":"https://metadata.un.org/sdg/2"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W96199840.pdf","grobid_xml":"https://content.openalex.org/works/W96199840.grobid-xml"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W2785851733","https://openalex.org/W2781528920","https://openalex.org/W1996582087","https://openalex.org/W3017152096","https://openalex.org/W2951512762","https://openalex.org/W942904764","https://openalex.org/W2414292166","https://openalex.org/W2096370583","https://openalex.org/W2014315236","https://openalex.org/W1555762259"],"abstract_inverted_index":{"Hevea":[0,125,551],"brasiliensis":[1,113],"or":[2,690],"Rubber":[3],"is":[4,39,167,199,213,576,609,620,654],"the":[5,31,59,80,83,91,101,150,162,184,189,210,271,288,292,295,302,305,313,328,356,374,382,386,406,417,424,453,456,475,517,533,614,629,632,645,648,660,664],"second":[6],"most":[7,322],"important":[8],"commodity":[9],"crop":[10,17,38],"in":[11,22,58,206,229,381,498,589,612,628,710],"Malaysia":[12],"after":[13,504],"Oil":[14],"Palm.":[15],"This":[16,37],"has":[18,27,52,260],"been":[19],"extensively":[20],"cultivated":[21,93],"South-east":[23],"Asia":[24],"region":[25],"but":[26,448],"its":[28],"origin":[29],"from":[30,87,480,532,550,603,663],"Amazon":[32],"Basin":[33],"of":[34,66,74,82,119,132,161,192,195,273,294,304,323,331,348,363,377,399,405,423,455,474,507,625,631,647,659,699],"South":[35],"America.":[36],"propagated":[40],"commercially":[41],"by":[42],"hand":[43],"pollination":[44,64],"and":[45,51,140,179,216,227,240,245,321,409,436,462,467,490,501,516,529,581,601,634],"bud-grafting":[46],"using":[47,149],"selected":[48],"parental":[49],"clones":[50,133,202,237,252,503,519,552],"caused":[53],"inbreeding":[54],"depression":[55],"as":[56,644,682,691],"seen":[57],"low":[60],"fruit":[61],"set":[62],"per":[63,69],"(average":[65],"ten":[67],"seeds":[68],"100":[70],"flowers":[71],"pollinated).":[72],"Estimation":[73],"genetic":[75,120,230,234,359],"variability":[76],"became":[77],"necessary":[78],"with":[79,145,543,578],"incorporation":[81],"new":[84,441],"prospected":[85],"materials":[86],"Brazil":[88],"compared":[89],"to":[90,171,282,291,338,340,373,451,459,521,556,562,617,671,686],"classical":[92],"clones.":[94,114],"Thus":[95,218],"molecular":[96,146,219],"markers":[97,147,220,274,296,306,319,460],"were":[98,127,143,224,307,325,343,353,370,496,554,679],"incorporated":[99],"into":[100],"studies":[102],"on":[103,309,344,355,396,416,443,513],"Hevea,":[104,613],"since":[105],"no":[106],"distinct":[107],"morphological":[108],"traits":[109],"exist":[110],"between":[111,123,168],"H.":[112],"In":[115],"this":[116,277,527],"study,":[117],"comparisons":[118],"linkage":[121,130,193,247,315,345,419,446],"maps":[122,131,158,175,185,235],"two":[124,251,332],"populations":[126],"conducted.":[128],"Genetic":[129,174],"RRIM":[134,136,177,180,208],"937,":[135],"600,":[137],"PB":[138,238,357],"5/51":[139,239,358],"IAN":[141,241,258,350,400],"873":[142,242,259],"constructed":[144],"generated":[148,223,275,297],"Amplified":[151],"Fragment":[152],"Length":[153],"Polymorphism":[154],"(AFLP)":[155],"technique.":[156],"These":[157,250,697],"covered":[159],"7.2-13%":[160],"estimated":[163],"genome":[164],"length":[165],"which":[166,207,402,575],"2000":[169],"cM":[170],"3000":[172],"cM.":[173],"for":[176,236,266,276,287,298,367,465,470,567],"937":[178],"600":[181,209],"showed":[182],"that":[183,200,221,493,553,611,706],"did":[186,437],"not":[187,280,438,676,693],"have":[188,522],"basic":[190],"number":[191,376],"groups":[194,248,316,447],"18.":[196],"One":[197],"explanation":[198],"both":[201,214,499],"are":[203,222,253,510,707],"closely":[204],"related":[205,256,616,714],"re-current":[211],"parent":[212],"paternal":[215,268],"maternal.":[217],"mostly":[225],"monomorphic":[226],"uninformative":[228],"map":[231],"construction.":[232],"Meanwhile,":[233],"spans":[243],"18":[244],"17":[246],"respectively.":[249],"quite":[254],"distantly":[255],"i.e":[257],"a":[261,267,284,390,410],"Brazilian":[262],"clone,":[263],"FA":[264],"1717":[265],"parent.":[269],"Nevertheless,":[270],"amount":[272],"population":[278],"was":[279,394,414,433,449],"enough":[281],"create":[283],"dense":[285],"coverage":[286],"maps.":[289],"Due":[290],"paucity":[293],"all":[299],"four":[300],"clones,":[301],"majority":[303],"placed":[308],"Group":[310,397],"1":[311,347,398],"whilst":[312],"other":[314,445],"had":[317,484,540,559],"2-4":[318],"each":[320],"them":[324],"located":[326,395,415],"near":[327],"centromere.":[329],"Locations":[330],"Quantitative":[333],"Trait":[334],"Loci":[335],"(QTLs)":[336],"associated":[337],"susceptibility":[339],"Corynespora":[341],"cassiicola":[342,558],"group":[346],"clone":[349],"873.":[351],"None":[352],"found":[354,588],"map.":[360],"The":[361,427,472],"Logarithim":[362],"Odds":[364],"(LOD)":[365],"score":[366],"these":[368,635],"QTLs":[369,442,457],"insignificant":[371],"due":[372],"small":[375],"pro":[378],"genies":[379],"used":[380],"disease":[383,584],"screening.":[384],"Using":[385],"interval":[387],"mapping":[388],"approach,":[389],"major":[391],"QTL":[392,412],"(Cc1-1ian)":[393],"873,":[401],"explained":[403],"10.1%":[404],"phenotypic":[407,425],"variation":[408],"minor":[411],"(Cc1-2ian)":[413],"same":[418],"group,":[420],"explaining":[421],"5.2%":[422],"variation.":[426],"subsequent":[428],"Multiple-QTL":[429],"Model":[430],"(MQM)":[431],"analysis":[432,473],"also":[434],"conducted":[435],"reveal":[439],"any":[440,444,669,672,687,695],"able":[450],"pin-point":[452],"positions":[454],"closer":[458],"P2E2M13205":[461],"P2E2M13198/":[463],"P2E2M13220":[464],"Cc1-1ian":[466],"marker":[468],"P2E2M13192":[469],"Cc1-2ian.":[471],"differential":[476],"display":[477,547],"patterns":[478],"obtained":[479],"30":[481],"primer":[482],"combinations":[483],"produced":[485],"14":[486],"specific":[487],"cDNA":[488,661],"fragments":[489],"it":[491],"appears":[492],"more":[494,523],"genes":[495,524,636,698],"expressed":[497,525,709],"tolerant":[500,518],"susceptible":[502,555],"72":[505],"h":[506],"inoculation.":[508],"Genes":[509],"being":[511],"turned":[512,621],"upon":[514,623],"infection":[515],"seem":[520],"at":[526],"stage":[528],"cDNAs":[530],"extracted":[531,662],"Differential":[534,546],"Display":[535],"Reverse":[536],"Transferase":[537],"(DDRT)":[538],"gels":[539],"high":[541],"homology":[542,561],"stress-related":[544],"genes.":[545],"products":[548],"excised":[549],"C.":[557],"strong":[560],"Populus":[563,606],"x":[564],"canadensis":[565],"mRNA":[566],"putative":[568],"histidine-containing":[569],"phosphotransfer":[570],"protein":[571,586,599],"2":[572],"(hpt2":[573],"gene)":[574],"involved":[577],"osmotic":[579,618],"stress":[580,619],"cell":[582],"growth,":[583],"resistance":[585],"(RPM1)":[587],"castor":[590],"beans":[591],"(Ricinus":[592],"communis),":[593],"Alternanthera":[594],"philoxeroides":[595],"(Aligator":[596],"weed)":[597],"salinity-induced":[598],"(SI10)":[600],"EST":[602],"severe":[604],"drought-stressed":[605],"leaves.":[607],"It":[608],"possible":[610],"gene":[615],"off":[622],"release":[624],"cassiicolin,":[626],"resulting":[627],"collapse":[630],"cells":[633],"could":[637,702],"be":[638,704],"induced":[639],"locally":[640],"rather":[641],"than":[642],"systematically":[643],"colonization":[646],"pathogen":[649],"only":[650],"occurs":[651],"when":[652],"cassiicolin":[653],"present.":[655],"A":[656],"large":[657],"portion":[658],"DDRT":[665],"gel":[666],"(82%)":[667],"lacked":[668],"similarity":[670,685],"known":[673,688],"proteins":[674],"(data":[675],"shown).":[677],"They":[678],"classified":[680],"either":[681],"transcripts":[683,692,705],"lacking":[684],"sequences":[689],"producing":[694],"hits.":[696],"unknown":[700],"function":[701],"probably":[703],"specifically":[708],"leaves":[711],"during":[712],"stress/defense":[713],"conditions.":[715]},"counts_by_year":[],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2016-06-24T00:00:00"}