{"id":"https://openalex.org/W7225817944","doi":"https://doi.org/10.3390/genes17111422","title":"Genomic Diversity and Genome-Wide Association Analysis of Growth Traits in a Chongming White Goat Conservation Population","display_name":"Genomic Diversity and Genome-Wide Association Analysis of Growth Traits in a Chongming White Goat Conservation Population","publication_year":2026,"publication_date":"2026-11-11","ids":{"openalex":"https://openalex.org/W7225817944","doi":"https://doi.org/10.3390/genes17111422"},"language":"en","primary_location":{"id":"doi:10.3390/genes17111422","doi":"https://doi.org/10.3390/genes17111422","is_oa":true,"landing_page_url":"https://doi.org/10.3390/genes17111422","pdf_url":null,"source":{"id":"https://openalex.org/S194631498","display_name":"Genes","issn_l":"2073-4425","issn":["2073-4425"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genes","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3390/genes17111422","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5161495004","display_name":"Lei Xing","orcid":"https://orcid.org/0009-0002-6322-1858","observed_orcids":["https://orcid.org/0009-0002-6322-1858"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Lei Xing","raw_affiliation_strings":["Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China"],"raw_orcid":"https://orcid.org/0009-0002-6322-1858","affiliations":[{"raw_affiliation_string":"Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103932150","display_name":"Haomin Wu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Haomin Wu","raw_affiliation_strings":["Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161436021","display_name":"Jin Zhou","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jin Zhou","raw_affiliation_strings":["Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161481341","display_name":"Yun Xue","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yun Xue","raw_affiliation_strings":["Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5161439394","display_name":"Wengang Zhang","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Wengang Zhang","raw_affiliation_strings":["Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Animal Disease Prevention and Control Center, Shanghai 201103, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":["https://openalex.org/A5161439394"],"corresponding_institution_ids":[],"apc_list":{"value":2600,"currency":"CHF","value_usd":3137},"apc_paid":{"value":2600,"currency":"CHF","value_usd":3137},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"17","issue":"11","first_page":"1422","last_page":"1422"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.0,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C2777782036","wikidata":"https://www.wikidata.org/wiki/Q38978","display_name":"Inbreeding","level":3,"score":0.8421000242233276},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8065000176429749},{"id":"https://openalex.org/C2776116246","wikidata":"https://www.wikidata.org/wiki/Q21067469","display_name":"Runs of Homozygosity","level":5,"score":0.7027999758720398},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.6743999719619751},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5710999965667725},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5637999773025513},{"id":"https://openalex.org/C166504685","wikidata":"https://www.wikidata.org/wiki/Q843905","display_name":"Circumference","level":2,"score":0.5062000155448914},{"id":"https://openalex.org/C147583825","wikidata":"https://www.wikidata.org/wiki/Q620876","display_name":"Body weight","level":2,"score":0.46239998936653137},{"id":"https://openalex.org/C56273599","wikidata":"https://www.wikidata.org/wiki/Q3122841","display_name":"White (mutation)","level":3,"score":0.46059998869895935},{"id":"https://openalex.org/C3641667","wikidata":"https://www.wikidata.org/wiki/Q1295959","display_name":"Effective population size","level":4,"score":0.448199987411499},{"id":"https://openalex.org/C514575182","wikidata":"https://www.wikidata.org/wiki/Q228395","display_name":"Mating","level":2,"score":0.38670000433921814},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.36980000138282776},{"id":"https://openalex.org/C2781316041","wikidata":"https://www.wikidata.org/wiki/Q1230584","display_name":"Diversity (politics)","level":2,"score":0.3343000113964081},{"id":"https://openalex.org/C90856448","wikidata":"https://www.wikidata.org/wiki/Q431","display_name":"Zoology","level":1,"score":0.33390000462532043},{"id":"https://openalex.org/C511355011","wikidata":"https://www.wikidata.org/wiki/Q12174","display_name":"Obesity","level":2,"score":0.328900009393692},{"id":"https://openalex.org/C186413461","wikidata":"https://www.wikidata.org/wiki/Q744727","display_name":"Genetic association","level":5,"score":0.32510000467300415},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3070000112056732},{"id":"https://openalex.org/C61320498","wikidata":"https://www.wikidata.org/wiki/Q265193","display_name":"Microsatellite","level":4,"score":0.29260000586509705},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.29190000891685486},{"id":"https://openalex.org/C3017825495","wikidata":"https://www.wikidata.org/wiki/Q26764","display_name":"Large white","level":2,"score":0.28949999809265137},{"id":"https://openalex.org/C169733012","wikidata":"https://www.wikidata.org/wiki/Q1613416","display_name":"Population size","level":3,"score":0.27880001068115234},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.2768000066280365},{"id":"https://openalex.org/C42972112","wikidata":"https://www.wikidata.org/wiki/Q170201","display_name":"Veterinary medicine","level":1,"score":0.273499995470047},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.2630999982357025},{"id":"https://openalex.org/C66322754","wikidata":"https://www.wikidata.org/wiki/Q4128476","display_name":"Birth weight","level":3,"score":0.2529999911785126},{"id":"https://openalex.org/C143589142","wikidata":"https://www.wikidata.org/wiki/Q2617554","display_name":"Loss of heterozygosity","level":4,"score":0.25040000677108765}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3390/genes17111422","doi":"https://doi.org/10.3390/genes17111422","is_oa":true,"landing_page_url":"https://doi.org/10.3390/genes17111422","pdf_url":null,"source":{"id":"https://openalex.org/S194631498","display_name":"Genes","issn_l":"2073-4425","issn":["2073-4425"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genes","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.3390/genes17111422","doi":"https://doi.org/10.3390/genes17111422","is_oa":true,"landing_page_url":"https://doi.org/10.3390/genes17111422","pdf_url":null,"source":{"id":"https://openalex.org/S194631498","display_name":"Genes","issn_l":"2073-4425","issn":["2073-4425"],"is_oa":true,"is_in_doaj":false,"is_core":true,"listed_in":["anvur-scientific","cwts-core","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Genes","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":36,"referenced_works":["https://openalex.org/W1980168725","https://openalex.org/W1984068087","https://openalex.org/W1986271539","https://openalex.org/W1999485160","https://openalex.org/W2004323313","https://openalex.org/W2033151532","https://openalex.org/W2056450591","https://openalex.org/W2094114124","https://openalex.org/W2099085143","https://openalex.org/W2103441770","https://openalex.org/W2119180969","https://openalex.org/W2119444539","https://openalex.org/W2565024804","https://openalex.org/W2799524357","https://openalex.org/W2897268704","https://openalex.org/W2901795552","https://openalex.org/W2921752502","https://openalex.org/W2951912016","https://openalex.org/W3014042482","https://openalex.org/W3049611831","https://openalex.org/W3080146821","https://openalex.org/W3118973033","https://openalex.org/W3131055609","https://openalex.org/W4200038561","https://openalex.org/W4200332011","https://openalex.org/W4221072874","https://openalex.org/W4303685878","https://openalex.org/W4377097659","https://openalex.org/W4387052504","https://openalex.org/W4392239542","https://openalex.org/W4394621984","https://openalex.org/W4401809138","https://openalex.org/W4406372049","https://openalex.org/W4406926240","https://openalex.org/W4409040108","https://openalex.org/W4414908062"],"related_works":[],"abstract_inverted_index":{"Background/Objectives:":[0],"This":[1],"study":[2],"characterized":[3],"genetic":[4,32,156],"diversity":[5,157],"in":[6,129],"a":[7,113,130],"Chongming":[8],"white":[9],"goat":[10],"conservation":[11,153],"population":[12,41,68],"and":[13,19,40,59,74,91,99,121,138,145,155,159],"identified":[14],"loci":[15],"associated":[16,95],"with":[17,96],"growth":[18],"body":[20,47,53],"conformation.":[21],"Methods:":[22],"Whole-genome":[23],"resequencing":[24],"of":[25,35],"350":[26],"goats":[27],"was":[28,70,80,105,116],"used":[29],"to":[30],"assess":[31],"diversity,":[33],"runs":[34],"homozygosity":[36],"(ROH),":[37],"genomic":[38],"relationships,":[39],"structure.":[42],"Genome-wide":[43],"association":[44],"analyses":[45],"examined":[46],"weight":[48,54,110,120],"at":[49,55,62,72],"180":[50,63],"days":[51,57,64],"(T8),":[52],"360":[56],"(T13),":[58],"chest":[60,123],"circumference":[61,126],"(T11).":[65],"Results:":[66],"Effective":[67],"size":[69],"estimated":[71],"49.1,":[73],"the":[75,108],"mean":[76],"ROH-based":[77],"inbreeding":[78],"coefficient":[79],"0.034":[81],"(range:":[82],"0\u20130.2112).":[83],"Fourteen":[84],"family":[85],"groups":[86],"were":[87,94],"inferred.":[88],"Three,":[89],"16,":[90],"eight":[92],"variants":[93],"T8,":[97],"T13,":[98],"T11,":[100],"respectively.":[101],"A":[102],"PRP1":[103],"variant":[104,115],"shared":[106,117],"between":[107,118],"two":[109],"traits,":[111],"whereas":[112],"FOXJ2":[114],"360-day":[119],"180-day":[122],"circumference.":[124],"Chest":[125],"associations":[127],"clustered":[128],"186.6-kb":[131],"chromosome":[132],"5":[133],"interval":[134],"containing":[135],"CLEC4D,":[136],"CLEC6A,":[137],"CLEC4E.":[139],"Exploratory":[140],"enrichment":[141],"included":[142],"nutrient-response,":[143],"developmental,":[144],"immune":[146],"recognition":[147],"terms.":[148],"Conclusions:":[149],"These":[150],"findings":[151],"inform":[152],"mating":[154],"management":[158],"prioritize":[160],"growth-associated":[161],"candidates":[162],"for":[163],"independent":[164],"validation.":[165]},"counts_by_year":[],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2026-11-12T00:00:00"}
