{"id":"https://openalex.org/W7225817392","doi":"https://doi.org/10.21203/rs.3.rs-11318655/v1","title":"A new set of Multilocus Intron Polymorphism Loci (MIPs) for identifying mammal species, subspecies and their first hybrid and backcross generations with their closely related taxa or domestic counterparts","display_name":"A new set of Multilocus Intron Polymorphism Loci (MIPs) for identifying mammal species, subspecies and their first hybrid and backcross generations with their closely related taxa or domestic counterparts","publication_year":2026,"publication_date":"2026-11-11","ids":{"openalex":"https://openalex.org/W7225817392","doi":"https://doi.org/10.21203/rs.3.rs-11318655/v1"},"language":"en","primary_location":{"id":"doi:10.21203/rs.3.rs-11318655/v1","doi":"https://doi.org/10.21203/rs.3.rs-11318655/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11318655/v1","pdf_url":null,"source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},"volume":null,"type":"preprint","is_traditional":true,"indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://doi.org/10.21203/rs.3.rs-11318655/v1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5117624289","display_name":"Lara Marinangeli","orcid":"https://orcid.org/0009-0007-1579-4148","observed_orcids":["https://orcid.org/0009-0007-1579-4148"]},"institutions":[{"id":"https://openalex.org/I103225651","display_name":"Fondazione Edmund Mach","ror":"https://ror.org/0381bab64","country_code":"IT","type":"other","lineage":["https://openalex.org/I103225651"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Lara Marinangeli","raw_affiliation_strings":["Fondazione Edmund Mach"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Edmund Mach","institution_ids":["https://openalex.org/I103225651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5092037612","display_name":"Annalisa Scapolatiello","orcid":"https://orcid.org/0009-0004-3984-8081","observed_orcids":["https://orcid.org/0009-0004-3984-8081"]},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Annalisa Scapolatiello","raw_affiliation_strings":["University of Padua"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Padua","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067932041","display_name":"Elisa Boscari","orcid":"https://orcid.org/0000-0001-8881-9907","observed_orcids":["https://orcid.org/0000-0001-8881-9907"]},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elisa Boscari","raw_affiliation_strings":["University of Padua"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Padua","institution_ids":["https://openalex.org/I138689650"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006339943","display_name":"Barbara Crestanello","orcid":"https://orcid.org/0000-0003-1610-8692","observed_orcids":["https://orcid.org/0000-0003-1610-8692"]},"institutions":[{"id":"https://openalex.org/I103225651","display_name":"Fondazione Edmund Mach","ror":"https://ror.org/0381bab64","country_code":"IT","type":"other","lineage":["https://openalex.org/I103225651"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Barbara Crestanello","raw_affiliation_strings":["Fondazione Edmund Mach"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Edmund Mach","institution_ids":["https://openalex.org/I103225651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060061120","display_name":"Giulio Galla","orcid":"https://orcid.org/0000-0002-4573-0897","observed_orcids":["https://orcid.org/0000-0002-4573-0897","https://orcid.org/0000-0003-0063-9229"]},"institutions":[{"id":"https://openalex.org/I103225651","display_name":"Fondazione Edmund Mach","ror":"https://ror.org/0381bab64","country_code":"IT","type":"other","lineage":["https://openalex.org/I103225651"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giulio Galla","raw_affiliation_strings":["Fondazione Edmund Mach"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Edmund Mach","institution_ids":["https://openalex.org/I103225651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074196807","display_name":"Romolo Caniglia","orcid":"https://orcid.org/0000-0002-3641-9490","observed_orcids":["https://orcid.org/0000-0002-3641-9490"]},"institutions":[{"id":"https://openalex.org/I4210116113","display_name":"Istituto Superiore per la Protezione e la Ricerca Ambientale","ror":"https://ror.org/022zv0672","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210104593","https://openalex.org/I4210116113","https://openalex.org/I4210117642"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Romolo Caniglia","raw_affiliation_strings":["Istituto Superiore per la Protezione e la Ricerca Ambientale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Superiore per la Protezione e la Ricerca Ambientale","institution_ids":["https://openalex.org/I4210116113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102765390","display_name":"Elena Fabbri","orcid":"https://orcid.org/0000-0002-9445-1886","observed_orcids":["https://orcid.org/0000-0002-9445-1886"]},"institutions":[{"id":"https://openalex.org/I4210116113","display_name":"Istituto Superiore per la Protezione e la Ricerca Ambientale","ror":"https://ror.org/022zv0672","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210104593","https://openalex.org/I4210116113","https://openalex.org/I4210117642"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Elena Fabbri","raw_affiliation_strings":["Istituto Superiore per la Protezione e la Ricerca Ambientale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Superiore per la Protezione e la Ricerca Ambientale","institution_ids":["https://openalex.org/I4210116113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161490764","display_name":"Federica Mattucci","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210116113","display_name":"Istituto Superiore per la Protezione e la Ricerca Ambientale","ror":"https://ror.org/022zv0672","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210104593","https://openalex.org/I4210116113","https://openalex.org/I4210117642"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Federica Mattucci","raw_affiliation_strings":["Istituto Superiore per la Protezione e la Ricerca Ambientale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Superiore per la Protezione e la Ricerca Ambientale","institution_ids":["https://openalex.org/I4210116113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037801841","display_name":"Nadia Mucci","orcid":"https://orcid.org/0000-0002-7522-7213","observed_orcids":["https://orcid.org/0000-0002-7522-7213"]},"institutions":[{"id":"https://openalex.org/I4210116113","display_name":"Istituto Superiore per la Protezione e la Ricerca Ambientale","ror":"https://ror.org/022zv0672","country_code":"IT","type":"government","lineage":["https://openalex.org/I4210104593","https://openalex.org/I4210116113","https://openalex.org/I4210117642"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Nadia Mucci","raw_affiliation_strings":["Istituto Superiore per la Protezione e la Ricerca Ambientale"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Istituto Superiore per la Protezione e la Ricerca Ambientale","institution_ids":["https://openalex.org/I4210116113"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057715245","display_name":"Jaroslav Pi\u00e1lek","orcid":"https://orcid.org/0000-0002-0829-7481","observed_orcids":["https://orcid.org/0000-0002-0829-7481"]},"institutions":[{"id":"https://openalex.org/I202391551","display_name":"Czech Academy of Sciences","ror":"https://ror.org/053avzc18","country_code":"CZ","type":"government","lineage":["https://openalex.org/I202391551"]},{"id":"https://openalex.org/I4210144542","display_name":"Czech Academy of Sciences, Institute of Vertebrate Biology","ror":"https://ror.org/05bcgdd94","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I202391551","https://openalex.org/I4210144542"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Jaroslav Pi\u00e1lek","raw_affiliation_strings":["Czech Academy of Sciences, Institute of Vertebrate Biology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Czech Academy of Sciences, Institute of Vertebrate Biology","institution_ids":["https://openalex.org/I202391551","https://openalex.org/I4210144542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161441496","display_name":"Francesco Nonnis-Marzano","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I124601658","display_name":"University of Parma","ror":"https://ror.org/02k7wn190","country_code":"IT","type":"education","lineage":["https://openalex.org/I124601658"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Francesco Nonnis-Marzano","raw_affiliation_strings":["University of Parma"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Parma","institution_ids":["https://openalex.org/I124601658"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075205834","display_name":"Heidi C. Hauffe","orcid":"https://orcid.org/0000-0003-3098-8964","observed_orcids":["https://orcid.org/0000-0003-3098-8964"]},"institutions":[{"id":"https://openalex.org/I103225651","display_name":"Fondazione Edmund Mach","ror":"https://ror.org/0381bab64","country_code":"IT","type":"other","lineage":["https://openalex.org/I103225651"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Heidi Christine Hauffe","raw_affiliation_strings":["Fondazione Edmund Mach"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Fondazione Edmund Mach","institution_ids":["https://openalex.org/I103225651"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5075272938","display_name":"Leonardo Congiu","orcid":"https://orcid.org/0000-0002-9293-9837","observed_orcids":["https://orcid.org/0000-0002-9293-9837"]},"institutions":[{"id":"https://openalex.org/I138689650","display_name":"University of Padua","ror":"https://ror.org/00240q980","country_code":"IT","type":"education","lineage":["https://openalex.org/I138689650"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Leonardo Congiu","raw_affiliation_strings":["University of Padua"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Padua","institution_ids":["https://openalex.org/I138689650"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5117624289"],"corresponding_institution_ids":["https://openalex.org/I103225651"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10012","display_name":"Genetic diversity and population structure","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.003700000001117587,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.0013000000035390258,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8223000168800354},{"id":"https://openalex.org/C8182607","wikidata":"https://www.wikidata.org/wiki/Q2094405","display_name":"Introgression","level":3,"score":0.8100000023841858},{"id":"https://openalex.org/C17966761","wikidata":"https://www.wikidata.org/wiki/Q68947","display_name":"Subspecies","level":2,"score":0.6859999895095825},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6402999758720398},{"id":"https://openalex.org/C72472911","wikidata":"https://www.wikidata.org/wiki/Q2004691","display_name":"Backcrossing","level":3,"score":0.5990999937057495},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.5274999737739563},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5187000036239624},{"id":"https://openalex.org/C48189365","wikidata":"https://www.wikidata.org/wiki/Q42621","display_name":"Hybrid","level":2,"score":0.4309999942779541},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.42899999022483826},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.39320001006126404},{"id":"https://openalex.org/C190789776","wikidata":"https://www.wikidata.org/wiki/Q767511","display_name":"Genetic marker","level":3,"score":0.38179999589920044},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.374099999666214},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.37369999289512634},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.3587000072002411},{"id":"https://openalex.org/C107023163","wikidata":"https://www.wikidata.org/wiki/Q143089","display_name":"Gene flow","level":4,"score":0.34610000252723694},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.3422999978065491},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.33500000834465027},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33480000495910645},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3199999928474426},{"id":"https://openalex.org/C35605836","wikidata":"https://www.wikidata.org/wiki/Q2064311","display_name":"Linkage disequilibrium","level":5,"score":0.31630000472068787},{"id":"https://openalex.org/C94671646","wikidata":"https://www.wikidata.org/wiki/Q207551","display_name":"Intron","level":3,"score":0.30300000309944153},{"id":"https://openalex.org/C137132547","wikidata":"https://www.wikidata.org/wiki/Q4752570","display_name":"Ancestry-informative marker","level":5,"score":0.2935999929904938},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.2928999960422516},{"id":"https://openalex.org/C53702515","wikidata":"https://www.wikidata.org/wiki/Q971246","display_name":"Synteny","level":4,"score":0.2890999913215637},{"id":"https://openalex.org/C26772143","wikidata":"https://www.wikidata.org/wiki/Q572872","display_name":"Reproductive isolation","level":3,"score":0.2800999879837036},{"id":"https://openalex.org/C2777160741","wikidata":"https://www.wikidata.org/wiki/Q2311855","display_name":"Molecular marker","level":3,"score":0.2791000008583069},{"id":"https://openalex.org/C153523973","wikidata":"https://www.wikidata.org/wiki/Q292077","display_name":"Amplified fragment length polymorphism","level":4,"score":0.26919999718666077},{"id":"https://openalex.org/C197754878","wikidata":"https://www.wikidata.org/wiki/Q80711","display_name":"Haplotype","level":4,"score":0.26579999923706055},{"id":"https://openalex.org/C2780902518","wikidata":"https://www.wikidata.org/wiki/Q6033780","display_name":"Inheritance (genetic algorithm)","level":3,"score":0.2639999985694885},{"id":"https://openalex.org/C68873052","wikidata":"https://www.wikidata.org/wiki/Q349856","display_name":"Genetic variation","level":3,"score":0.2531000077724457},{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.25279998779296875},{"id":"https://openalex.org/C175783326","wikidata":"https://www.wikidata.org/wiki/Q185055","display_name":"Mendelian inheritance","level":3,"score":0.25040000677108765}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.21203/rs.3.rs-11318655/v1","doi":"https://doi.org/10.21203/rs.3.rs-11318655/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11318655/v1","pdf_url":null,"source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.21203/rs.3.rs-11318655/v1","doi":"https://doi.org/10.21203/rs.3.rs-11318655/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11318655/v1","pdf_url":null,"source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":38,"referenced_works":["https://openalex.org/W1981924741","https://openalex.org/W2042604656","https://openalex.org/W2092198369","https://openalex.org/W2099901798","https://openalex.org/W2113501815","https://openalex.org/W2117526725","https://openalex.org/W2124146565","https://openalex.org/W2137233166","https://openalex.org/W2146290595","https://openalex.org/W2157107905","https://openalex.org/W2157797319","https://openalex.org/W2159400585","https://openalex.org/W2161339576","https://openalex.org/W2167353703","https://openalex.org/W2170747616","https://openalex.org/W2268200271","https://openalex.org/W2342249984","https://openalex.org/W2488220022","https://openalex.org/W2560658716","https://openalex.org/W2782358215","https://openalex.org/W2910102508","https://openalex.org/W3007441307","https://openalex.org/W3119073337","https://openalex.org/W3139367551","https://openalex.org/W4213261767","https://openalex.org/W4307994154","https://openalex.org/W4388615740","https://openalex.org/W4389781369","https://openalex.org/W4396899427","https://openalex.org/W4401208072","https://openalex.org/W4409257135","https://openalex.org/W4410081400","https://openalex.org/W4412154880","https://openalex.org/W4414346270","https://openalex.org/W4414731219","https://openalex.org/W7149382806","https://openalex.org/W7166680132","https://openalex.org/W7196948201"],"related_works":[],"abstract_inverted_index":{"Abstract":[0],"Animal":[1],"conservation":[2,55],"efforts":[3],"benefit":[4],"from":[5,41,99,177,198,207,234],"rapid,":[6],"cost-effective":[7],"genomic":[8,143],"markers":[9],"for":[10,69,137,157],"species":[11],"and":[12,26,141,175,195,209,217,230,241,257],"hybrid":[13,229],"identification":[14],"across":[15,171,253],"taxa.":[16],"PCR-based":[17],"protocols":[18],"have":[19,131],"dominated":[20],"the":[21,29,34,51,57,67,106,167,184],"study":[22],"of":[23,37,53,59,72,80,82,96,108,122,154,166,186,193,202,212,243,265],"gene":[24],"flow":[25],"introgression":[27],"in":[28,145],"last":[30],"30":[31],"years,":[32],"allowing":[33],"molecular":[35],"characterization":[36,58],"target":[38],"DNA":[39,98],"even":[40],"low-quality":[42],"non-invasive":[43],"samples.":[44],"While":[45],"whole":[46],"genome":[47],"sequencing":[48],"remains":[49],"beyond":[50],"budget":[52],"most":[54],"studies,":[56],"genome-wide":[60],"single":[61],"nucleotide":[62],"polymorphisms":[63],"(SNPs)":[64],"has":[65],"overcome":[66],"need":[68],"expensive":[70],"development":[71],"marker":[73],"sets":[74,103],"yet":[75],"provides":[76],"thousands":[77,81],"or":[78,86],"tens":[79],"markers;":[83],"however,":[84],"SNP-chips":[85],"other":[87],"SNP-based":[88],"approaches":[89],"like":[90],"genotyping-by-sequencing":[91],"(GBS),":[92],"require":[93],"large":[94],"quantities":[95],"high-quality":[97],"each":[100],"sample.":[101],"Marker":[102],"that":[104],"combine":[105],"advantages":[107,240],"a":[109,119,151],"PCR":[110],"step":[111],"(requiring":[112],"less":[113],"good":[114],"quality":[115],"DNA)":[116],"applicable":[117],"to":[118,134,189,261],"wide":[120],"range":[121],"species,":[123,139,173],"remain":[124],"elusive.":[125],"Recently,":[126],"Multilocus":[127],"Intron":[128],"Polymorphisms":[129],"(MIPs)":[130],"been":[132],"shown":[133],"be":[135],"useful":[136],"defining":[138],"hybrids,":[140],"population":[142],"structure":[144],"freshwater":[146],"fish.":[147],"Here,":[148],"we":[149],"propose":[150],"new":[152],"panel":[153,168,188],"187":[155],"MIPs":[156],"mammals,":[158],"selected":[159],"by":[160],"aligning":[161],"121":[162],"genomes.":[163],"Cross-amplification":[164],"performance":[165],"was":[169],"tested":[170],"15":[172],"subspecies":[174],"hybrids":[176,194],"six":[178],"different":[179,191,228,254],"mammalian":[180,255],"families.":[181],"To":[182],"validate":[183],"capacity":[185],"this":[187],"distinguish":[190],"classes":[192],"backcrosses,":[196],"offspring":[197],"known":[199],"laboratory":[200],"crosses":[201],"Muridae,":[203],"as":[204,206],"well":[205],"free-ranging":[208],"domestic":[210],"taxa":[211],"Leporidae,":[213],"Bovidae,":[214],"Canidae,":[215],"Felidae":[216],"Suidae":[218],"were":[219],"analysed.":[220],"Results":[221],"compared":[222],"favourably":[223],"with":[224],"simulated":[225],"genotypes":[226],"representing":[227],"backcross":[231],"classes,":[232],"generated":[233],"real":[235],"parental":[236],"genotypes.":[237],"The":[238],"main":[239],"limitations":[242],"our":[244],"proposed":[245],"method":[246],"are":[247],"discussed,":[248],"including":[249],"its":[250,258],"cross-amplification":[251],"efficiency":[252],"families":[256],"limited":[259],"ability":[260],"resolve":[262],"complex":[263],"patterns":[264],"historical":[266],"introgression.":[267]},"counts_by_year":[],"updated_date":"2026-11-12T12:28:57.059296","created_date":"2026-11-12T00:00:00"}