{"id":"https://openalex.org/W7225755016","doi":"https://doi.org/10.1186/s12870-026-10302-5","title":"Genome-wide identification of the TCP transcription factors family and its response to abiotic stress in tobacco (Nicotiana tabacum L.)","display_name":"Genome-wide identification of the TCP transcription factors family and its response to abiotic stress in tobacco (Nicotiana tabacum L.)","publication_year":2026,"publication_date":"2026-11-10","ids":{"openalex":"https://openalex.org/W7225755016","doi":"https://doi.org/10.1186/s12870-026-10302-5"},"language":"en","primary_location":{"id":"doi:10.1186/s12870-026-10302-5","doi":"https://doi.org/10.1186/s12870-026-10302-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-026-10302-5","pdf_url":null,"source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12870-026-10302-5","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5161402379","display_name":"Jun Jiao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Jiao","raw_affiliation_strings":["College of Agriculture, Guizhou University, Guiyang, 550025, China","Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]},{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161381094","display_name":"Yongxian Xu","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yongxian Xu","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5139124144","display_name":"Xing Mo","orcid":"https://orcid.org/0009-0003-0295-5062","observed_orcids":["https://orcid.org/0009-0003-0295-5062"]},"institutions":[{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xing Mo","raw_affiliation_strings":["College of Agriculture, Guizhou University, Guiyang, 550025, China","Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]},{"raw_affiliation_string":"Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5135422921","display_name":"Zhiqi Zhang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiqi Zhang","raw_affiliation_strings":["College of Agriculture, Guizhou University, Guiyang, 550025, China","Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]},{"raw_affiliation_string":"Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100423384","display_name":"Xiaomeng Wang","orcid":"https://orcid.org/0000-0001-5058-4022","observed_orcids":["https://orcid.org/0000-0001-5058-4022"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xiaomeng Wang","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5161380176","display_name":"Chuntao Ji","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chuntao Ji","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112915472","display_name":"Qiuqiang Hou","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Qiuqiang Hou","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108414879","display_name":"Wei Lu","orcid":"https://orcid.org/0009-0005-0848-6003","observed_orcids":["https://orcid.org/0009-0005-0848-6003"]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Weipeng Lu","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088475579","display_name":"Xinwei Ji","orcid":null,"observed_orcids":[]},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Xinwei Ji","raw_affiliation_strings":["Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Honghe Prefecture Branch of Yunnan Tobacco Company, Honghe, 652300, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025835009","display_name":"Renxiang Liu","orcid":"https://orcid.org/0000-0003-4562-8507","observed_orcids":["https://orcid.org/0000-0003-4562-8507"]},"institutions":[{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Renxiang Liu","raw_affiliation_strings":["College of Tobacco Science of Guizhou University, Guiyang, 550025, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Tobacco Science of Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5157697526","display_name":"Xiuhong Xu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I178232147","display_name":"Guizhou University","ror":"https://ror.org/02wmsc916","country_code":"CN","type":"education","lineage":["https://openalex.org/I178232147"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiuhong Xu","raw_affiliation_strings":["College of Agriculture, Guizhou University, Guiyang, 550025, China","Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Agriculture, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]},{"raw_affiliation_string":"Institute of Vegetable Industry Technology Research, Guizhou University, Guiyang, 550025, China","institution_ids":["https://openalex.org/I178232147"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5157697526"],"corresponding_institution_ids":["https://openalex.org/I178232147"],"apc_list":{"value":3090,"currency":"USD","value_usd":3090},"apc_paid":{"value":3090,"currency":"USD","value_usd":3090},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.5009999871253967,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10014","display_name":"Plant Stress Responses and Tolerance","score":0.5009999871253967,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.49390000104904175,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10076","display_name":"Plant-Microbe Interactions and Immunity","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8866999745368958},{"id":"https://openalex.org/C89519541","wikidata":"https://www.wikidata.org/wiki/Q4667893","display_name":"Abiotic stress","level":3,"score":0.7742999792098999},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.6852999925613403},{"id":"https://openalex.org/C2781205006","wikidata":"https://www.wikidata.org/wiki/Q181095","display_name":"Nicotiana tabacum","level":3,"score":0.6840999722480774},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6133999824523926},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6110000014305115},{"id":"https://openalex.org/C132215390","wikidata":"https://www.wikidata.org/wiki/Q461335","display_name":"Abiotic component","level":2,"score":0.47690001130104065},{"id":"https://openalex.org/C5911399","wikidata":"https://www.wikidata.org/wiki/Q2278983","display_name":"Gene family","level":4,"score":0.40939998626708984},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.39399999380111694},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.3921000063419342},{"id":"https://openalex.org/C6929976","wikidata":"https://www.wikidata.org/wiki/Q3771881","display_name":"Regulator","level":3,"score":0.38179999589920044},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.3767000138759613},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.3560999929904938},{"id":"https://openalex.org/C146926016","wikidata":"https://www.wikidata.org/wiki/Q3500367","display_name":"Biotic stress","level":4,"score":0.3296999931335449},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.3248000144958496},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.32429999113082886},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3239000141620636},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.30649998784065247},{"id":"https://openalex.org/C27153228","wikidata":"https://www.wikidata.org/wiki/Q3787274","display_name":"Transcriptional regulation","level":4,"score":0.28929999470710754},{"id":"https://openalex.org/C2778803642","wikidata":"https://www.wikidata.org/wiki/Q851829","display_name":"Nicotiana","level":4,"score":0.2833000123500824},{"id":"https://openalex.org/C132376346","wikidata":"https://www.wikidata.org/wiki/Q7315962","display_name":"Response element","level":5,"score":0.27309998869895935},{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.265500009059906},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.26260000467300415},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.25609999895095825}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1186/s12870-026-10302-5","doi":"https://doi.org/10.1186/s12870-026-10302-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-026-10302-5","pdf_url":null,"source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1186/s12870-026-10302-5","doi":"https://doi.org/10.1186/s12870-026-10302-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12870-026-10302-5","pdf_url":null,"source":{"id":"https://openalex.org/S6444338","display_name":"BMC Plant Biology","issn_l":"1471-2229","issn":["1471-2229"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-d","jufo-1","ki-jl-1","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Plant Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"TCP":[0,32,46,75,93,131,182],"transcription":[1,33,76,94],"factors":[2,34,77,95],"are":[3,133],"unique":[4],"key":[5],"transcriptional":[6,204],"regulators":[7],"exclusive":[8],"to":[9,53,142],"plants,":[10],"playing":[11],"an":[12],"indispensable":[13],"role":[14],"in":[15,35,50,84,96,152,179,243,293,320],"plant":[16,68,159,162],"growth":[17,163],"and":[18,114,164,166,203,221,257,263,267,277,312],"development.":[19],"In":[20,87],"recent":[21],"years,":[22],"numerous":[23],"studies":[24],"have":[25],"gradually":[26],"unveiled":[27],"the":[28,42,97,121,153,180,297,310,316],"involvement":[29],"of":[30,150,156,174,230,254,289,299,315],"certain":[31],"abiotic":[36,54,79,231],"stress":[37,80,232,291],"responses,":[38],"shedding":[39],"light":[40],"on":[41],"potential":[43],"pivotal":[44],"roles":[45],"family":[47,319],"might":[48],"play":[49],"plants\u2019":[51],"reactions":[52],"stress.":[55],"Although":[56],"tobacco":[57,98,130,181],"(":[58,197],"Nicotiana":[59],"tabacum":[60],"L.)":[61],"is":[62,82],"widely":[63],"recognized":[64],"as":[65,226,285,325],"a":[66,227,286,326],"model":[67],"with":[69,136,260],"economic":[70],"significance,":[71],"research":[72],"into":[73,109],"its":[74,85],"concerning":[78],"responses":[81],"still":[83],"infancy.":[86],"this":[88],"study,":[89],"we":[90],"identified":[91,147,224],"28":[92],"genome,":[99],"designated":[100],"NtTCP1":[101],"through":[102,296],"NtTCP28.":[103],"Phylogenetic":[104],"analysis":[105,127,146,170,235,314],"classified":[106],"these":[107,281],"genes":[108,132,196],"Class":[110,115],"I":[111],"(13":[112],"members)":[113],"II":[116],"(15":[117],"members),":[118],"all":[119,184],"containing":[120],"conserved":[122],"bHLH":[123],"domain.":[124],"Gene":[125],"structure":[126],"revealed":[128,171,207],"that":[129,193,208,237],"structurally":[134],"concise,":[135],"exon":[137],"numbers":[138],"ranging":[139],"from":[140,186],"1":[141],"4.":[143],"Cis-regulatory":[144],"element":[145],"three":[148],"types":[149],"elements":[151],"promoter":[154],"regions":[155],"NtTCP":[157,317],"genes:":[158],"hormone":[160],"response,":[161],"development,":[165],"stress-related":[167],"elements.":[168],"Homology":[169],"seven":[172],"pairs":[173,178],"highly":[175],"similar":[176],"gene":[177,318],"family,":[183],"resulting":[185],"segmental":[187],"duplication.":[188],"Subcellular":[189],"localization":[190],"experiments":[191],"confirmed":[192],"four":[194],"candidate":[195,228],"NtTCP1/24/27/16":[198],")":[199],"encode":[200],"nuclear-localized":[201],"proteins,":[202],"self-activation":[205,212],"assay":[206],"only":[209],"NtTCP24":[210],"exhibits":[211],"capability.":[213],"qPCR-based":[214],"expression":[215],"profiling":[216],"under":[217],"ABA,":[218],"salt,":[219],"osmotic,":[220],"cold":[222,241,290],"stresses":[223],"NtTCP16":[225,238,284],"regulator":[229,288],"responses.":[233],"Functional":[234],"demonstrated":[236],"positively":[239],"regulates":[240],"tolerance":[242,292],"tobacco.":[244],"Under":[245],"low-temperature":[246],"stress,":[247],"NtTCP16-overexpressing":[248],"lines":[249],"exhibited":[250],"significantly":[251],"increased":[252],"activities":[253],"SOD,":[255],"POD,":[256],"CAT,":[258],"along":[259],"elevated":[261],"proline":[262],"soluble":[264],"sugar":[265],"accumulation":[266],"reduced":[268],"MDA":[269],"content,":[270],"indicating":[271],"enhanced":[272],"antioxidant":[273],"capacity,":[274],"osmotic":[275],"adjustment,":[276],"membrane":[278],"integrity.":[279],"Collectively,":[280],"findings":[282],"establish":[283],"positive":[287],"tobacco,":[294,321],"acting":[295],"modulation":[298],"multiple":[300],"physiological":[301],"defense":[302],"pathways.":[303],"This":[304],"study":[305],"provides":[306],"preliminary":[307],"information":[308],"for":[309,328],"classification":[311],"functional":[313,330],"which":[322],"may":[323],"serve":[324],"reference":[327],"future":[329],"studies.":[331]},"counts_by_year":[],"updated_date":"2026-11-11T12:16:26.678958","created_date":"2026-11-11T00:00:00"}
