{"id":"https://openalex.org/W7225744651","doi":"https://doi.org/10.3390/microorganisms14112595","title":"Antimicrobial Resistance Profiling and Identification of Putative Resistance Genes in Erwinia amylovora from Xinjiang, China","display_name":"Antimicrobial Resistance Profiling and Identification of Putative Resistance Genes in Erwinia amylovora from Xinjiang, China","publication_year":2026,"publication_date":"2026-11-10","ids":{"openalex":"https://openalex.org/W7225744651","doi":"https://doi.org/10.3390/microorganisms14112595"},"language":"en","primary_location":{"id":"doi:10.3390/microorganisms14112595","doi":"https://doi.org/10.3390/microorganisms14112595","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms14112595","pdf_url":null,"source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3390/microorganisms14112595","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5161409373","display_name":"Jing Chen","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I166427055","display_name":"Xinjiang Agricultural University","ror":"https://ror.org/04qjh2h11","country_code":"CN","type":"education","lineage":["https://openalex.org/I166427055"]},{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Chen","raw_affiliation_strings":["Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China","Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China","institution_ids":["https://openalex.org/I4210151987"]},{"raw_affiliation_string":"Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China","institution_ids":["https://openalex.org/I166427055"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105931206","display_name":"Rui Yu","orcid":"https://orcid.org/0000-0002-0360-0795","observed_orcids":["https://orcid.org/0000-0002-0360-0795"]},"institutions":[{"id":"https://openalex.org/I166427055","display_name":"Xinjiang Agricultural University","ror":"https://ror.org/04qjh2h11","country_code":"CN","type":"education","lineage":["https://openalex.org/I166427055"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Yu","raw_affiliation_strings":["Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of the Pest Monitoring and Safety Control of Crops and Forests of the Xinjiang Uygur Autonomous Region, College of Agronomy, Xinjiang Agricultural University, Urumqi 830052, China","institution_ids":["https://openalex.org/I166427055"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102264814","display_name":"Zhigang Hao","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhigang Hao","raw_affiliation_strings":["Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China","institution_ids":["https://openalex.org/I4210151987"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5161405523","display_name":"Guangkuo Li","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4210151987","display_name":"Ministry of Agriculture and Rural Affairs","ror":"https://ror.org/05ckt8b96","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guangkuo Li","raw_affiliation_strings":["Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Integrated Pest Management on Crop in Northwestern Oasis, Ministry of Agriculture and Rural Affairs, Urumqi 830091, China","institution_ids":["https://openalex.org/I4210151987"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5161405523"],"corresponding_institution_ids":["https://openalex.org/I4210151987"],"apc_list":{"value":2700,"currency":"CHF","value_usd":3258},"apc_paid":{"value":2700,"currency":"CHF","value_usd":3258},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.0,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"14","issue":"11","first_page":"2595","last_page":"2595"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9818999767303467,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.9818999767303467,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.015300000086426735,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[],"concepts":[{"id":"https://openalex.org/C2778495000","wikidata":"https://www.wikidata.org/wiki/Q134827","display_name":"Erwinia","level":3,"score":0.9032999873161316},{"id":"https://openalex.org/C2776496690","wikidata":"https://www.wikidata.org/wiki/Q41456487","display_name":"Fire blight","level":4,"score":0.8755999803543091},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.847599983215332},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6140999794006348},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6079999804496765},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6021000146865845},{"id":"https://openalex.org/C2776666601","wikidata":"https://www.wikidata.org/wiki/Q3457855","display_name":"Resistome","level":5,"score":0.6000999808311462},{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.5547999739646912},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.5167999863624573},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.47290000319480896},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.46810001134872437},{"id":"https://openalex.org/C126513998","wikidata":"https://www.wikidata.org/wiki/Q8973627","display_name":"Nanopore sequencing","level":4,"score":0.4596000015735626},{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.4205000102519989},{"id":"https://openalex.org/C2775874295","wikidata":"https://www.wikidata.org/wiki/Q568694","display_name":"PEAR","level":2,"score":0.40209999680519104},{"id":"https://openalex.org/C93678976","wikidata":"https://www.wikidata.org/wiki/Q4215946","display_name":"Plant disease resistance","level":3,"score":0.32850000262260437},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.30140000581741333},{"id":"https://openalex.org/C2778883795","wikidata":"https://www.wikidata.org/wiki/Q804517","display_name":"Pathogenic bacteria","level":3,"score":0.2919999957084656},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.2913999855518341},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.27790001034736633},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.2754000127315521},{"id":"https://openalex.org/C2780746887","wikidata":"https://www.wikidata.org/wiki/Q140652","display_name":"Xanthomonas","level":3,"score":0.27459999918937683},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2655999958515167},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.2596000134944916},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.25920000672340393},{"id":"https://openalex.org/C2780923616","wikidata":"https://www.wikidata.org/wiki/Q193045","display_name":"Tetracycline","level":3,"score":0.25220000743865967},{"id":"https://openalex.org/C3020794230","wikidata":"https://www.wikidata.org/wiki/Q804517","display_name":"Bacterial disease","level":2,"score":0.25049999356269836}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3390/microorganisms14112595","doi":"https://doi.org/10.3390/microorganisms14112595","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms14112595","pdf_url":null,"source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.3390/microorganisms14112595","doi":"https://doi.org/10.3390/microorganisms14112595","is_oa":true,"landing_page_url":"https://doi.org/10.3390/microorganisms14112595","pdf_url":null,"source":{"id":"https://openalex.org/S4210222090","display_name":"Microorganisms","issn_l":"2076-2607","issn":["2076-2607"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","norway-1","poland-40","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Microorganisms","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":35,"referenced_works":["https://openalex.org/W1931722540","https://openalex.org/W1979973356","https://openalex.org/W1980321055","https://openalex.org/W2032866129","https://openalex.org/W2045204781","https://openalex.org/W2056309108","https://openalex.org/W2078993882","https://openalex.org/W2103017472","https://openalex.org/W2104002234","https://openalex.org/W2122387757","https://openalex.org/W2125895459","https://openalex.org/W2135621733","https://openalex.org/W2147526198","https://openalex.org/W2149452073","https://openalex.org/W2347413759","https://openalex.org/W2474075311","https://openalex.org/W2513675038","https://openalex.org/W2612129764","https://openalex.org/W2794122483","https://openalex.org/W2813910014","https://openalex.org/W2888183732","https://openalex.org/W2923319531","https://openalex.org/W2925800094","https://openalex.org/W2951912016","https://openalex.org/W2952167528","https://openalex.org/W2981347880","https://openalex.org/W3037944325","https://openalex.org/W3110060428","https://openalex.org/W3203343200","https://openalex.org/W4306410171","https://openalex.org/W4309666648","https://openalex.org/W4360989843","https://openalex.org/W4380988286","https://openalex.org/W4386723258","https://openalex.org/W4410829209"],"related_works":[],"abstract_inverted_index":{"Fire":[0],"blight,":[1],"caused":[2],"by":[3],"Erwinia":[4],"amylovora":[5,42,146],"(Burrill)":[6],"Winslow":[7],"et":[8],"al.,":[9],"is":[10],"a":[11],"destructive":[12],"and":[13,20,28,60,68,75,110,150,161],"highly":[14],"contagious":[15],"bacterial":[16],"disease":[17],"of":[18,91,121,155],"pear":[19],"other":[21],"rosaceous":[22],"plants.":[23],"This":[24,136],"pathogen":[25,162],"spreads":[26],"globally":[27],"leads":[29],"to":[30,47,71,80,114],"considerable":[31],"economic":[32],"losses":[33],"in":[34,148],"fruit":[35],"production.":[36],"In":[37],"this":[38],"study,":[39],"three":[40,93,103,128],"E.":[41,145],"strains":[43,130],"with":[44,106],"reduced":[45],"susceptibility":[46],"tetramycin":[48,81],"were":[49,86,98,104],"isolated":[50],"from":[51],"Xinjiang,":[52],"China.":[53],"Hybrid":[54],"whole-genome":[55],"sequencing":[56],"combining":[57],"Oxford":[58],"Nanopore":[59],"Illumina":[61],"platforms":[62],"was":[63,112,131],"performed":[64],"for":[65,142,158],"genome":[66],"assembly":[67],"functional":[69],"annotation":[70],"screen":[72],"candidate":[73,84,123],"genes":[74,85,125],"genomic":[76,140],"elements":[77],"potentially":[78],"linked":[79],"response.":[82],"Nine":[83],"identified":[87],"on":[88],"the":[89,92,127,152],"chromosomes":[90],"strains.":[94],"Among":[95],"them,":[96],"five":[97],"annotated":[99],"as":[100],"efflux-related":[101],"genes,":[102],"associated":[105],"antibiotic":[107,115],"target":[108],"modification,":[109],"one":[111],"related":[113],"inactivation.":[116],"The":[117],"relative":[118],"expression":[119],"level":[120],"nine":[122],"resistance":[124,159],"across":[126],"resistant":[129],"analyzed":[132],"using":[133],"quantitative":[134],"PCR.":[135],"work":[137],"provides":[138],"preliminary":[139],"clues":[141],"characterizing":[143],"local":[144],"populations":[147],"China,":[149],"supports":[151],"future":[153],"development":[154],"molecular":[156],"markers":[157],"monitoring":[160],"detection,":[163],"which":[164],"may":[165],"facilitate":[166],"integrated":[167],"fire":[168],"blight":[169],"management.":[170]},"counts_by_year":[],"updated_date":"2026-11-11T12:16:26.678958","created_date":"2026-11-11T00:00:00"}