{"id":"https://openalex.org/W7225012874","doi":"https://doi.org/10.1021/acs.jchemed.6c00990","title":"DEAba: A Paper-Based, Data-Driven Methodology for Deep Learning of Metabolism","display_name":"DEAba: A Paper-Based, Data-Driven Methodology for Deep Learning of Metabolism","publication_year":2026,"publication_date":"2026-10-31","ids":{"openalex":"https://openalex.org/W7225012874","doi":"https://doi.org/10.1021/acs.jchemed.6c00990"},"language":"en","primary_location":{"id":"doi:10.1021/acs.jchemed.6c00990","doi":"https://doi.org/10.1021/acs.jchemed.6c00990","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jchemed.6c00990","pdf_url":"https://pubs.acs.org/jceda8/article-pdf/doi/10.1021/acs.jchemed.6c00990/69042053/acs.jchemed.6c00990.pdf","source":{"id":"https://openalex.org/S105208853","display_name":"Journal of Chemical Education","issn_l":"0021-9584","issn":["0021-9584","1938-1328"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","erih-plus","jufo-1","ki-jl-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Education","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://pubs.acs.org/jceda8/article-pdf/doi/10.1021/acs.jchemed.6c00990/69042053/acs.jchemed.6c00990.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046246819","display_name":"Alfonso Olaya\u2010Abril","orcid":"https://orcid.org/0000-0002-8961-1099","observed_orcids":["https://orcid.org/0000-0002-8961-1099"]},"institutions":[{"id":"https://openalex.org/I53110688","display_name":"University of C\u00f3rdoba","ror":"https://ror.org/05yc77b46","country_code":"ES","type":"education","lineage":["https://openalex.org/I53110688"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Alfonso Olaya-Abril","raw_affiliation_strings":["University of Co\u0301rdoba , , Severo Ochoa Building, Rabanales Campus , ,"],"raw_orcid":"https://orcid.org/0000-0002-8961-1099","affiliations":[{"raw_affiliation_string":"University of Co\u0301rdoba , , Severo Ochoa Building, Rabanales Campus , ,","institution_ids":["https://openalex.org/I53110688"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5046246819"],"corresponding_institution_ids":["https://openalex.org/I53110688"],"apc_list":{"value":4500,"currency":"USD","value_usd":4500},"apc_paid":{"value":4500,"currency":"USD","value_usd":4500},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.89405224,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11526","display_name":"Innovative Teaching Methods","score":0.8086000084877014,"subfield":{"id":"https://openalex.org/subfields/3304","display_name":"Education"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11526","display_name":"Innovative Teaching Methods","score":0.8086000084877014,"subfield":{"id":"https://openalex.org/subfields/3304","display_name":"Education"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10072","display_name":"Science Education and Pedagogy","score":0.09279999881982803,"subfield":{"id":"https://openalex.org/subfields/3304","display_name":"Education"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10636","display_name":"Innovative Teaching and Learning Methods","score":0.014499999582767487,"subfield":{"id":"https://openalex.org/subfields/3204","display_name":"Developmental and Educational Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biochemistry-education","display_name":"biochemistry education","score":0.6140000224113464},{"id":"https://openalex.org/keywords/paper-based-learning","display_name":"paper-based learning","score":0.5600000023841858},{"id":"https://openalex.org/keywords/omics-data-interpretation","display_name":"omics data interpretation","score":0.8270000219345093},{"id":"https://openalex.org/keywords/differential-expression-analysis","display_name":"differential expression analysis","score":0.8040000200271606},{"id":"https://openalex.org/keywords/cognitive-load-theory","display_name":"cognitive load theory","score":0.7889999747276306},{"id":"https://openalex.org/keywords/icap-framework","display_name":"ICAP framework","score":0.8169999718666077},{"id":"https://openalex.org/keywords/bloom-s-taxonomy","display_name":"Bloom's taxonomy","score":0.9959999918937683},{"id":"https://openalex.org/keywords/active-learning","display_name":"active learning","score":0.8579999804496765},{"id":"https://openalex.org/keywords/conceptual-blending","display_name":"conceptual blending","score":0.777999997138977},{"id":"https://openalex.org/keywords/undergraduate-students","display_name":"undergraduate students","score":0.5379999876022339},{"id":"https://openalex.org/keywords/exam-performance","display_name":"exam performance","score":0.6039999723434448}],"concepts":[{"id":"https://openalex.org/C169900460","wikidata":"https://www.wikidata.org/wiki/Q2200417","display_name":"Cognition","level":2,"score":0.6103000044822693},{"id":"https://openalex.org/C26760741","wikidata":"https://www.wikidata.org/wiki/Q160402","display_name":"Perception","level":2,"score":0.6087999939918518},{"id":"https://openalex.org/C188147891","wikidata":"https://www.wikidata.org/wiki/Q147638","display_name":"Cognitive science","level":1,"score":0.5310999751091003},{"id":"https://openalex.org/C48164120","wikidata":"https://www.wikidata.org/wiki/Q4491893","display_name":"Concept learning","level":2,"score":0.4975999891757965},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4948999881744385},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4706000089645386},{"id":"https://openalex.org/C192209626","wikidata":"https://www.wikidata.org/wiki/Q190909","display_name":"Focus (optics)","level":2,"score":0.4399000108242035},{"id":"https://openalex.org/C61641136","wikidata":"https://www.wikidata.org/wiki/Q1107019","display_name":"Cognitive load","level":3,"score":0.4230000078678131},{"id":"https://openalex.org/C2781329482","wikidata":"https://www.wikidata.org/wiki/Q3823192","display_name":"Conceptual change","level":2,"score":0.4205000102519989},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4074000120162964},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.4043000042438507},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.39329999685287476},{"id":"https://openalex.org/C14224292","wikidata":"https://www.wikidata.org/wiki/Q13600188","display_name":"Conceptual framework","level":2,"score":0.3774000108242035},{"id":"https://openalex.org/C77967617","wikidata":"https://www.wikidata.org/wiki/Q4677561","display_name":"Active learning (machine learning)","level":2,"score":0.3677000105381012},{"id":"https://openalex.org/C13606891","wikidata":"https://www.wikidata.org/wiki/Q2623243","display_name":"Conceptual model","level":2,"score":0.32659998536109924},{"id":"https://openalex.org/C145420912","wikidata":"https://www.wikidata.org/wiki/Q853077","display_name":"Mathematics education","level":1,"score":0.3222000002861023},{"id":"https://openalex.org/C92393732","wikidata":"https://www.wikidata.org/wiki/Q1790374","display_name":"Learning theory","level":2,"score":0.31380000710487366},{"id":"https://openalex.org/C55587333","wikidata":"https://www.wikidata.org/wiki/Q1133029","display_name":"Engineering ethics","level":1,"score":0.3093999922275543},{"id":"https://openalex.org/C56739046","wikidata":"https://www.wikidata.org/wiki/Q192060","display_name":"Knowledge management","level":1,"score":0.3075999915599823},{"id":"https://openalex.org/C16443162","wikidata":"https://www.wikidata.org/wiki/Q1068473","display_name":"Educational technology","level":2,"score":0.30480000376701355},{"id":"https://openalex.org/C96427005","wikidata":"https://www.wikidata.org/wiki/Q98442705","display_name":"Learning sciences","level":3,"score":0.29339998960494995},{"id":"https://openalex.org/C56995899","wikidata":"https://www.wikidata.org/wiki/Q1126687","display_name":"Focus group","level":2,"score":0.2777000069618225},{"id":"https://openalex.org/C37228920","wikidata":"https://www.wikidata.org/wiki/Q1307600","display_name":"Experiential learning","level":2,"score":0.2728999853134155},{"id":"https://openalex.org/C58160517","wikidata":"https://www.wikidata.org/wiki/Q1362435","display_name":"Psychology of learning","level":2,"score":0.27079999446868896},{"id":"https://openalex.org/C180747234","wikidata":"https://www.wikidata.org/wiki/Q23373","display_name":"Cognitive psychology","level":1,"score":0.2703000009059906},{"id":"https://openalex.org/C2991874392","wikidata":"https://www.wikidata.org/wiki/Q1124842","display_name":"Metabolic stability","level":3,"score":0.26269999146461487},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.2606000006198883},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.25060001015663147}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1021/acs.jchemed.6c00990","doi":"https://doi.org/10.1021/acs.jchemed.6c00990","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jchemed.6c00990","pdf_url":"https://pubs.acs.org/jceda8/article-pdf/doi/10.1021/acs.jchemed.6c00990/69042053/acs.jchemed.6c00990.pdf","source":{"id":"https://openalex.org/S105208853","display_name":"Journal of Chemical Education","issn_l":"0021-9584","issn":["0021-9584","1938-1328"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","erih-plus","jufo-1","ki-jl-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Education","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.1021/acs.jchemed.6c00990","doi":"https://doi.org/10.1021/acs.jchemed.6c00990","is_oa":true,"landing_page_url":"https://doi.org/10.1021/acs.jchemed.6c00990","pdf_url":"https://pubs.acs.org/jceda8/article-pdf/doi/10.1021/acs.jchemed.6c00990/69042053/acs.jchemed.6c00990.pdf","source":{"id":"https://openalex.org/S105208853","display_name":"Journal of Chemical Education","issn_l":"0021-9584","issn":["0021-9584","1938-1328"],"is_oa":false,"is_in_doaj":false,"is_core":true,"listed_in":["cwts-core","dongbi-c","erih-plus","jufo-1","ki-jl-1","norway-1","poland-70","russia-white-list-1"],"host_organization":"https://openalex.org/P4310320006","host_organization_name":"American Chemical Society","host_organization_lineage":["https://openalex.org/P4310320006"],"host_organization_lineage_names":["American Chemical Society"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Chemical Education","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.9901999831199646,"id":"https://metadata.un.org/sdg/4","display_name":"Quality education"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7225012874.pdf","grobid_xml":"https://content.openalex.org/works/W7225012874.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W1964861149","https://openalex.org/W1985560134","https://openalex.org/W1989748540","https://openalex.org/W1989776343","https://openalex.org/W1991176879","https://openalex.org/W1995010434","https://openalex.org/W2010593734","https://openalex.org/W2025133745","https://openalex.org/W2032317024","https://openalex.org/W2046036800","https://openalex.org/W2053915626","https://openalex.org/W2056999880","https://openalex.org/W2095632701","https://openalex.org/W2099907817","https://openalex.org/W2108617939","https://openalex.org/W2125655203","https://openalex.org/W2134512579","https://openalex.org/W2134894556","https://openalex.org/W2137576942","https://openalex.org/W2143658024","https://openalex.org/W2158534319","https://openalex.org/W2595295879","https://openalex.org/W2788067001","https://openalex.org/W2971755171","https://openalex.org/W3031308783","https://openalex.org/W3082046040","https://openalex.org/W3099407680","https://openalex.org/W3133961340","https://openalex.org/W3158972714","https://openalex.org/W3163600545","https://openalex.org/W3177938779","https://openalex.org/W3187466846","https://openalex.org/W3213508139","https://openalex.org/W3216449378","https://openalex.org/W4200032503","https://openalex.org/W4214855643","https://openalex.org/W4323256736","https://openalex.org/W4361980947","https://openalex.org/W4366824215","https://openalex.org/W4378953475","https://openalex.org/W4379212539","https://openalex.org/W4390618351","https://openalex.org/W4390748532","https://openalex.org/W4393167445","https://openalex.org/W4399140364","https://openalex.org/W4404701531","https://openalex.org/W4407842487","https://openalex.org/W4407984739","https://openalex.org/W4409268873","https://openalex.org/W4410455147","https://openalex.org/W4411042154","https://openalex.org/W4412999972","https://openalex.org/W4413380046","https://openalex.org/W7128797286","https://openalex.org/W7163407908"],"related_works":["https://openalex.org/W3154437783","https://openalex.org/W3171864798","https://openalex.org/W3133285363","https://openalex.org/W2902231774","https://openalex.org/W2061312005","https://openalex.org/W3169511130","https://openalex.org/W2898508197","https://openalex.org/W1514781956","https://openalex.org/W4365791640","https://openalex.org/W3021264249"],"abstract_inverted_index":{"Abstract":[0],"Mastering":[1],"metabolic":[2],"concepts":[3],"remains":[4],"a":[5,67,181],"persistent":[6],"challenge":[7],"for":[8,188],"undergraduate":[9,125],"students":[10,75],"due":[11],"to":[12,48,102],"the":[13,17,19,24,61,108],"abstract":[14],"nature":[15],"of":[16,26,32,113,153,196],"concepts,":[18],"intricate":[20],"pathway":[21],"interconnections,":[22],"and":[23,46,92,106,144,157,184,192],"necessity":[25],"integrative":[27],"reasoning.":[28],"The":[29],"common":[30],"focus":[31],"prior":[33],"educational":[34],"stages":[35],"on":[36],"low-order":[37],"cognitive":[38,111],"assessment":[39],"exacerbates":[40],"this":[41,56],"challenge,":[42],"reinforcing":[43],"surface-level":[44],"learning":[45,86,172,191],"leading":[47],"widespread":[49],"underpreparedness":[50],"in":[51,76,84,123,135,174],"incoming":[52],"students.":[53],"To":[54],"address":[55,107],"systemic":[57],"issue,":[58],"we":[59],"developed":[60],"Differential":[62],"Expression":[63],"Analysis-based":[64],"activity":[65],"(DEAba):":[66],"cooperative,":[68],"paper-based":[69],"yet":[70],"data-intensive":[71],"methodology":[72],"that":[73,163],"engages":[74],"interpreting":[77],"adapted":[78],"real-world":[79],"omics":[80],"data":[81],"sets.":[82],"Grounded":[83],"established":[85],"frameworks":[87],"(Cognitive":[88],"Load":[89],"Theory,":[90],"ICAP,":[91],"Bloom\u2019s":[93],"taxonomy),":[94],"DEAba":[95,128,178],"combines":[96],"data-driven":[97],"reasoning":[98],"with":[99,132],"analog":[100,167],"collaboration":[101],"foster":[103],"conceptual":[104,158],"integration":[105],"high":[109,151],"intrinsic":[110],"load":[112],"metabolism.":[114],"Across":[115],"seven":[116],"academic":[117],"years":[118],"(n":[119],"=":[120,140],"1,212":[121],"students)":[122],"an":[124],"Biochemistry":[126],"course,":[127],"implementation":[129],"was":[130],"associated":[131],"significant":[133],"improvements":[134],"final":[136],"exam":[137,142],"performance":[138],"(p":[139],"0.001),":[141],"participation,":[143],"pass":[145],"rates,":[146],"while":[147],"perception":[148],"surveys":[149],"revealed":[150],"levels":[152],"perceived":[154],"usefulness,":[155],"engagement,":[156],"clarity.":[159],"These":[160],"findings":[161],"suggest":[162],"theoretically":[164],"grounded,":[165],"low-cost":[166],"designs":[168],"may":[169],"support":[170],"improved":[171],"outcomes":[173],"challenging":[175],"biochemical":[176],"topics.":[177],"offers":[179],"instructors":[180],"scalable,":[182],"evidence-based,":[183],"readily":[185],"transferable":[186],"tool":[187],"promoting":[189],"active":[190],"deep,":[193],"integrated":[194],"understanding":[195],"metabolism":[197],"without":[198],"requiring":[199],"technological":[200],"infrastructure.":[201]},"counts_by_year":[],"updated_date":"2026-11-02T09:45:03.842371","created_date":"2026-11-01T00:00:00"}
