{"id":"https://openalex.org/W7225005953","doi":"https://doi.org/10.1093/nar/gkag1087","title":"AnnelidaDB: a comprehensive platform of taxonomic and multi-omic resources across annelids","display_name":"AnnelidaDB: a comprehensive platform of taxonomic and multi-omic resources across annelids","publication_year":2026,"publication_date":"2026-10-31","ids":{"openalex":"https://openalex.org/W7225005953","doi":"https://doi.org/10.1093/nar/gkag1087","pmid":"https://pubmed.ncbi.nlm.nih.gov/42963947"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkag1087","doi":"https://doi.org/10.1093/nar/gkag1087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkag1087","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkag1087/72639821/gkag1087.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkag1087/72639821/gkag1087.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5128444150","display_name":"Yunlong Li","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Yunlong Li","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5160251197","display_name":"Haokun Liu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haokun Liu","raw_affiliation_strings":["Data Darkness Lab, School of Biomedical Engineering, Suzhou Institute for Advanced Research, University of Science and Technology of China , Suzhou, Jiangsu 215000 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Darkness Lab, School of Biomedical Engineering, Suzhou Institute for Advanced Research, University of Science and Technology of China , Suzhou, Jiangsu 215000 ,","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048903991","display_name":"Ma\u00ebva Perez","orcid":"https://orcid.org/0000-0003-4532-8299","observed_orcids":["https://orcid.org/0000-0003-4532-8299"]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Maeva Perez","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":"https://orcid.org/0000-0003-4532-8299","affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5160256842","display_name":"Yi-Xuan Li","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Yi-Xuan Li","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5160254546","display_name":"Fan Hui","orcid":"https://orcid.org/0009-0004-8609-4075","observed_orcids":["https://orcid.org/0009-0004-8609-4075"]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Fan Hui","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":"https://orcid.org/0009-0004-8609-4075","affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152520864","display_name":"Zihui Shen","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Zihui Shen","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101794043","display_name":"Yanan Sun","orcid":"https://orcid.org/0000-0003-3215-3434","observed_orcids":["https://orcid.org/0000-0003-3215-3434"]},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210101167","display_name":"Institute of Oceanology","ror":"https://ror.org/018yw5541","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210101167"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanan Sun","raw_affiliation_strings":["Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 ,"],"raw_orcid":"https://orcid.org/0000-0003-3215-3434","affiliations":[{"raw_affiliation_string":"Laboratory of Marine Organism Taxonomy and Phylogeny, Institute of Oceanology, Chinese Academy of Sciences , Qingdao 266071 ,","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210101167"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046495620","display_name":"Jos\u00e9 Mar\u00eda Mart\u00edn-Dur\u00e1n","orcid":"https://orcid.org/0000-0002-2572-1061","observed_orcids":["https://orcid.org/0000-0002-2572-1061"]},"institutions":[{"id":"https://openalex.org/I166337079","display_name":"Queen Mary University of London","ror":"https://ror.org/026zzn846","country_code":"GB","type":"education","lineage":["https://openalex.org/I124357947","https://openalex.org/I166337079"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Jos\u00e9 M Mart\u00edn-Dur\u00e1n","raw_affiliation_strings":["School of Biological and Behavioural Sciences, Queen Mary University of London , London E1 4NS ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biological and Behavioural Sciences, Queen Mary University of London , London E1 4NS ,","institution_ids":["https://openalex.org/I166337079"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004426873","display_name":"Greg W. Rouse","orcid":"https://orcid.org/0000-0001-9036-9263","observed_orcids":["https://orcid.org/0000-0001-9036-9263"]},"institutions":[{"id":"https://openalex.org/I150209017","display_name":"Scripps Institution of Oceanography","ror":"https://ror.org/04v7hvq31","country_code":"US","type":"facility","lineage":["https://openalex.org/I150209017","https://openalex.org/I36258959"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Greg W Rouse","raw_affiliation_strings":["Scripps Institution of Oceanography, University of California , San Diego 92093-0202 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Scripps Institution of Oceanography, University of California , San Diego 92093-0202 ,","institution_ids":["https://openalex.org/I150209017","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060902636","display_name":"Peiyuan Qian","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I200769079","display_name":"Hong Kong University of Science and Technology","ror":"https://ror.org/00q4vv597","country_code":"HK","type":"education","lineage":["https://openalex.org/I200769079"]},{"id":"https://openalex.org/I4210106122","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)","ror":"https://ror.org/00y7mag53","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210106122"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Pei-Yuan Qian","raw_affiliation_strings":["Department of Ocean Science, The Hong Kong University of Science and Technology , Hong Kong SAR ,","Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) , Guangzhou, Guangdong 511458 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Ocean Science, The Hong Kong University of Science and Technology , Hong Kong SAR ,","institution_ids":["https://openalex.org/I200769079"]},{"raw_affiliation_string":"Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) , Guangzhou, Guangdong 511458 ,","institution_ids":["https://openalex.org/I4210106122"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5152392943","display_name":"Jianliang Xu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Jianliang Xu","raw_affiliation_strings":["Department of Computer Science, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5160266548","display_name":"Xike Xie","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xike Xie","raw_affiliation_strings":["Data Darkness Lab, School of Biomedical Engineering, Suzhou Institute for Advanced Research, University of Science and Technology of China , Suzhou, Jiangsu 215000 ,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Data Darkness Lab, School of Biomedical Engineering, Suzhou Institute for Advanced Research, University of Science and Technology of China , Suzhou, Jiangsu 215000 ,","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064352990","display_name":"Jian\u2010Wen Qiu","orcid":"https://orcid.org/0000-0002-1541-9627","observed_orcids":["https://orcid.org/0000-0002-1541-9627"]},"institutions":[{"id":"https://openalex.org/I141568987","display_name":"Hong Kong Baptist University","ror":"https://ror.org/0145fw131","country_code":"HK","type":"education","lineage":["https://openalex.org/I141568987"]}],"countries":["HK"],"is_corresponding":true,"raw_author_name":"Jian-Wen Qiu","raw_affiliation_strings":["Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,"],"raw_orcid":"https://orcid.org/0000-0002-1541-9627","affiliations":[{"raw_affiliation_string":"Department of Biology, Hong Kong Baptist University , Hong Kong SAR ,","institution_ids":["https://openalex.org/I141568987"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5064352990","https://openalex.org/A5160266548"],"corresponding_institution_ids":["https://openalex.org/I126520041","https://openalex.org/I141568987"],"apc_list":{"value":3992,"currency":"USD","value_usd":3992},"apc_paid":{"value":3992,"currency":"USD","value_usd":3992},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.74379144,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9854000210762024,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T14399","display_name":"Invertebrate Taxonomy and Ecology","score":0.004900000058114529,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.002199999988079071,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annelida","display_name":"Annelida","score":0.8870000243186951},{"id":"https://openalex.org/keywords/multi-omics-database","display_name":"multi-omics database","score":0.8230000138282776},{"id":"https://openalex.org/keywords/genome-evolution","display_name":"genome evolution","score":0.6019999980926514},{"id":"https://openalex.org/keywords/mitochondrial-genome","display_name":"mitochondrial genome","score":0.8450000286102295},{"id":"https://openalex.org/keywords/transcriptome","display_name":"transcriptome","score":0.9399999976158142},{"id":"https://openalex.org/keywords/proteome","display_name":"proteome","score":0.9449999928474426},{"id":"https://openalex.org/keywords/epigenome","display_name":"epigenome","score":0.9340000152587891},{"id":"https://openalex.org/keywords/single-cell-atlas","display_name":"single-cell atlas","score":0.8379999995231628},{"id":"https://openalex.org/keywords/symbiotic-bacteria","display_name":"symbiotic bacteria","score":0.8640000224113464},{"id":"https://openalex.org/keywords/regeneration","display_name":"regeneration","score":0.4880000054836273},{"id":"https://openalex.org/keywords/host-microbe-interactions","display_name":"host-microbe interactions","score":0.8450000286102295},{"id":"https://openalex.org/keywords/gene-family","display_name":"gene family","score":0.4480000138282776},{"id":"https://openalex.org/keywords/functional-annotation","display_name":"functional annotation","score":0.5929999947547913},{"id":"https://openalex.org/keywords/phylogenetic-framework","display_name":"phylogenetic framework","score":0.609000027179718}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8711000084877014},{"id":"https://openalex.org/C53702515","wikidata":"https://www.wikidata.org/wiki/Q971246","display_name":"Synteny","level":4,"score":0.8511000275611877},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5070000290870667},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4918000102043152},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.4438999891281128},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4401000142097473},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.40299999713897705},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.38589999079704285},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.3517000079154968},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.33329999446868896},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.32670000195503235},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.2953000068664551},{"id":"https://openalex.org/C31266012","wikidata":"https://www.wikidata.org/wiki/Q6554340","display_name":"Linkage (software)","level":3,"score":0.2896000146865845},{"id":"https://openalex.org/C110872660","wikidata":"https://www.wikidata.org/wiki/Q37813","display_name":"Ecosystem","level":2,"score":0.28850001096725464},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.275299996137619},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.27160000801086426},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.26919999718666077},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.2515000104904175}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1093/nar/gkag1087","doi":"https://doi.org/10.1093/nar/gkag1087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkag1087","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkag1087/72639821/gkag1087.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:42963947","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42963947","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkag1087","doi":"https://doi.org/10.1093/nar/gkag1087","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkag1087","pdf_url":"https://academic.oup.com/nar/advance-article-pdf/doi/10.1093/nar/gkag1087/72639821/gkag1087.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["anvur-scientific","cwts-core","doaj","dongbi-a","doyens","jufo-3","ki-jl-3","medline","norway-2","oarl","poland-200","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335767","display_name":"Sanming Project of Medicine in Shenzhen","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7225005953.pdf","grobid_xml":"https://content.openalex.org/works/W7225005953.grobid-xml"},"referenced_works_count":69,"referenced_works":["https://openalex.org/W646561130","https://openalex.org/W1858934703","https://openalex.org/W1989032832","https://openalex.org/W1996700726","https://openalex.org/W2011301426","https://openalex.org/W2011657487","https://openalex.org/W2057603597","https://openalex.org/W2079480877","https://openalex.org/W2101291993","https://openalex.org/W2104005232","https://openalex.org/W2108108770","https://openalex.org/W2142678478","https://openalex.org/W2158416609","https://openalex.org/W2169456326","https://openalex.org/W2268044904","https://openalex.org/W2489378519","https://openalex.org/W2498453885","https://openalex.org/W2765165840","https://openalex.org/W2765745983","https://openalex.org/W2793867790","https://openalex.org/W2900629010","https://openalex.org/W2950509696","https://openalex.org/W2951506174","https://openalex.org/W2953151710","https://openalex.org/W2979777794","https://openalex.org/W2981612066","https://openalex.org/W2988396470","https://openalex.org/W3007075333","https://openalex.org/W3017049640","https://openalex.org/W3030462946","https://openalex.org/W3048090444","https://openalex.org/W3136249515","https://openalex.org/W3143063265","https://openalex.org/W3168328869","https://openalex.org/W3175616293","https://openalex.org/W3177816066","https://openalex.org/W3203343200","https://openalex.org/W3213172277","https://openalex.org/W4212825691","https://openalex.org/W4220722192","https://openalex.org/W4249987447","https://openalex.org/W4304481015","https://openalex.org/W4305014070","https://openalex.org/W4309305890","https://openalex.org/W4316926647","https://openalex.org/W4318275814","https://openalex.org/W4366224338","https://openalex.org/W4376959289","https://openalex.org/W4377010645","https://openalex.org/W4378212544","https://openalex.org/W4379521442","https://openalex.org/W4385302529","https://openalex.org/W4389476606","https://openalex.org/W4396498453","https://openalex.org/W4400945373","https://openalex.org/W4401224872","https://openalex.org/W4401627818","https://openalex.org/W4402221742","https://openalex.org/W4404225840","https://openalex.org/W4404282799","https://openalex.org/W4404328264","https://openalex.org/W4404486545","https://openalex.org/W4404531735","https://openalex.org/W4409538910","https://openalex.org/W4411428689","https://openalex.org/W4415757411","https://openalex.org/W7131264302","https://openalex.org/W7135034101","https://openalex.org/W7168256916"],"related_works":["https://openalex.org/W4404282799","https://openalex.org/W3093771475","https://openalex.org/W3143647726","https://openalex.org/W7162185597","https://openalex.org/W7171927208","https://openalex.org/W2744584176","https://openalex.org/W2130160538","https://openalex.org/W3199240916","https://openalex.org/W4212825691","https://openalex.org/W1890010806"],"abstract_inverted_index":{"Annelids":[0],"inhabit":[1],"marine,":[2],"freshwater,":[3],"and":[4,7,16,29,57,90,103,110,122,131,138,152,181],"terrestrial":[5],"ecosystems":[6],"are":[8,155],"important":[9],"models":[10],"for":[11,60,142,157,172],"studying":[12],"animal":[13],"evolution,":[14,178],"regeneration,":[15,180],"host-microbe":[17],"interactions,":[18],"yet":[19],"their":[20],"rapidly":[21],"growing":[22],"omics":[23],"resources":[24,98],"remain":[25],"dispersed":[26],"across":[27],"repositories":[28],"publications.":[30],"We":[31],"developed":[32],"AnnelidaDB":[33,95,167],"(www.annelidadb.com),":[34],"a":[35,160],"species-centred":[36],"database":[37],"built":[38],"on":[39],"an":[40,169],"updated":[41],"phylogenetic":[42],"framework":[43],"that":[44],"integrates":[45],"genomes,":[46,48,56,73,77],"mitochondrial":[47,76],"transcriptomes,":[49],"proteomes,":[50],"epigenomes,":[51],"single-cell":[52,84,120],"datasets,":[53],"host-associated":[54],"symbiont":[55,93],"comparative":[58,173],"synteny":[59],"Annelida.":[61],"The":[62],"current":[63],"release":[64],"covers":[65],"1121":[66],"species,":[67,105],"including":[68],"152":[69],"species":[70],"with":[71,75,79,83],"nuclear":[72],"177":[74],"591":[78],"transcriptome":[80],"data,":[81],"5":[82],"datasets":[85],"comprising":[86],"209":[87],"802":[88],"cells,":[89],"30":[91],"bacterial":[92],"genomes.":[94],"organizes":[96],"these":[97],"through":[99],"10":[100],"navigation":[101],"directories":[102],"connects":[104],"genome,":[106],"gene,":[107],"functional":[108],"annotation,":[109],"gene-family":[111],"records.":[112],"Users":[113],"can":[114],"browse":[115],"genomic":[116],"assemblies,":[117],"explore":[118],"interactive":[119],"atlases":[121],"12":[123],"200":[124],"precomputed":[125],"Oxford":[126],"plots,":[127],"run":[128],"BLAST":[129],"queries":[130],"search":[132],"genes":[133],"against":[134,145],"the":[135],"annelid-specific":[136],"database,":[137],"submit":[139],"chromosome-level":[140],"data":[141],"syntenic":[143],"analysis":[144],"20":[146],"Annelida":[147],"linkage":[148],"groups.":[149],"Sequences,":[150],"annotations,":[151],"private":[153],"results":[154],"available":[156],"download.":[158],"As":[159],"comprehensive":[161],"multi-omics":[162],"resource":[163],"dedicated":[164],"to":[165],"annelids,":[166],"provides":[168],"accessible":[170],"platform":[171],"investigations":[174],"of":[175],"annelid":[176],"genome":[177],"adaptation,":[179],"symbiosis.":[182]},"counts_by_year":[],"updated_date":"2026-11-05T12:25:35.769452","created_date":"2026-11-01T00:00:00"}
