{"id":"https://openalex.org/W7224675349","doi":"https://doi.org/10.21203/rs.3.rs-11103134/v1","title":"A novel chromosomally encoded OXA-12-like \u03b2-lactamase variant (bla OXA-1433 ) in a new Aeromonas veronii sequence type (ST3591) from ready-to-eat oysters","display_name":"A novel chromosomally encoded OXA-12-like \u03b2-lactamase variant (bla OXA-1433 ) in a new Aeromonas veronii sequence type (ST3591) from ready-to-eat oysters","publication_year":2026,"publication_date":"2026-10-29","ids":{"openalex":"https://openalex.org/W7224675349","doi":"https://doi.org/10.21203/rs.3.rs-11103134/v1"},"language":"en","primary_location":{"id":"doi:10.21203/rs.3.rs-11103134/v1","doi":"https://doi.org/10.21203/rs.3.rs-11103134/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11103134/v1","pdf_url":"https://www.researchsquare.com/article/rs-11103134/latest.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},"volume":null,"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.researchsquare.com/article/rs-11103134/latest.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101980834","display_name":"Gustavo Rocha","orcid":"https://orcid.org/0000-0002-5488-0870","observed_orcids":["https://orcid.org/0000-0002-5488-0870"]},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Gustavo Rocha","raw_affiliation_strings":["Centre for Ecology, Evolution and Environmental Changes (CE3C) & CHANGE \u2013 Global Change and Sustainability Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Ecology, Evolution and Environmental Changes (CE3C) & CHANGE \u2013 Global Change and Sustainability Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa","institution_ids":["https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033712216","display_name":"Mateus Rocha Ribas","orcid":"https://orcid.org/0000-0002-9060-1031","observed_orcids":["https://orcid.org/0000-0002-9060-1031"]},"institutions":[{"id":"https://openalex.org/I4104125","display_name":"Universidade Federal de Santa Catarina","ror":"https://ror.org/041akq887","country_code":"BR","type":"education","lineage":["https://openalex.org/I4104125"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Mateus R. Ribas","raw_affiliation_strings":["Universidade Federal de Santa Catarina"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal de Santa Catarina","institution_ids":["https://openalex.org/I4104125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057760115","display_name":"Jussara Kasuko Palmeiro","orcid":"https://orcid.org/0000-0002-2778-463X","observed_orcids":["https://orcid.org/0000-0002-2778-463X"]},"institutions":[{"id":"https://openalex.org/I4104125","display_name":"Universidade Federal de Santa Catarina","ror":"https://ror.org/041akq887","country_code":"BR","type":"education","lineage":["https://openalex.org/I4104125"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Jussara K. Palmeiro","raw_affiliation_strings":["Universidade Federal de Santa Catarina"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal de Santa Catarina","institution_ids":["https://openalex.org/I4104125"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5160139588","display_name":"Thais C. M. Sincero","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I4104125","display_name":"Universidade Federal de Santa Catarina","ror":"https://ror.org/041akq887","country_code":"BR","type":"education","lineage":["https://openalex.org/I4104125"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Thais C. M. Sincero","raw_affiliation_strings":["Universidade Federal de Santa Catarina"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universidade Federal de Santa Catarina","institution_ids":["https://openalex.org/I4104125"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025407428","display_name":"M\u00f3nica V. Cunha","orcid":"https://orcid.org/0000-0003-0401-0276","observed_orcids":["https://orcid.org/0000-0003-0401-0276"]},"institutions":[{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"M\u00f3nica V. Cunha","raw_affiliation_strings":["Centre for Ecology, Evolution and Environmental Changes (CE3C) & CHANGE \u2013 Global Change and Sustainability Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre for Ecology, Evolution and Environmental Changes (CE3C) & CHANGE \u2013 Global Change and Sustainability Institute, Faculdade de Ci\u00eancias da Universidade de Lisboa","institution_ids":["https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1313","display_name":"Molecular Medicine"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1313","display_name":"Molecular Medicine"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10419","display_name":"Pharmaceutical and Antibiotic Environmental Impacts","score":0.0007999999797903001,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10195","display_name":"Antimicrobial Resistance in Staphylococcus","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/aeromonas-veronii","display_name":"Aeromonas veronii","score":0.9290000200271606},{"id":"https://openalex.org/keywords/carbapenemase","display_name":"carbapenemase","score":0.8550000190734863},{"id":"https://openalex.org/keywords/antibiotic-resistance-genes","display_name":"antibiotic resistance genes","score":0.7749999761581421},{"id":"https://openalex.org/keywords/imipenem-hydrolysis","display_name":"imipenem hydrolysis","score":0.8629999756813049},{"id":"https://openalex.org/keywords/genomic-surveillance","display_name":"genomic surveillance","score":0.5019999742507935},{"id":"https://openalex.org/keywords/food-safety","display_name":"food safety","score":0.3779999911785126},{"id":"https://openalex.org/keywords/aquatic-ecosystems","display_name":"aquatic ecosystems","score":0.3319999873638153}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.890999972820282},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.736299991607666},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5795999765396118},{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.5784000158309937},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.5579000115394592},{"id":"https://openalex.org/C132533263","wikidata":"https://www.wikidata.org/wiki/Q2347362","display_name":"Mobile genetic elements","level":4,"score":0.5241000056266785},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4975999891757965},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.4745999872684479},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.4659999907016754},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.4163999855518341},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4075999855995178},{"id":"https://openalex.org/C76818968","wikidata":"https://www.wikidata.org/wiki/Q181940","display_name":"Sanger sequencing","level":4,"score":0.4018000066280365},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.3815999925136566},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.33959999680519104},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.3328000009059906},{"id":"https://openalex.org/C2780313371","wikidata":"https://www.wikidata.org/wiki/Q137647","display_name":"Aeromonas","level":3,"score":0.32190001010894775},{"id":"https://openalex.org/C2780915542","wikidata":"https://www.wikidata.org/wiki/Q4688339","display_name":"Aeromonas veronii","level":4,"score":0.3212999999523163},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.3089999854564667},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.30559998750686646},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.30410000681877136},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.30090001225471497},{"id":"https://openalex.org/C199216141","wikidata":"https://www.wikidata.org/wiki/Q4995178","display_name":"Conserved sequence","level":4,"score":0.28679999709129333},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.2849999964237213},{"id":"https://openalex.org/C2780258820","wikidata":"https://www.wikidata.org/wiki/Q5195454","display_name":"Genomic island","level":4,"score":0.2653000056743622},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2619999945163727},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.25450000166893005},{"id":"https://openalex.org/C81977670","wikidata":"https://www.wikidata.org/wiki/Q585259","display_name":"Genetic diversity","level":3,"score":0.2533999979496002},{"id":"https://openalex.org/C17757408","wikidata":"https://www.wikidata.org/wiki/Q4135516","display_name":"genomic DNA","level":3,"score":0.25270000100135803}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.21203/rs.3.rs-11103134/v1","doi":"https://doi.org/10.21203/rs.3.rs-11103134/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11103134/v1","pdf_url":"https://www.researchsquare.com/article/rs-11103134/latest.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"}],"best_oa_location":{"id":"doi:10.21203/rs.3.rs-11103134/v1","doi":"https://doi.org/10.21203/rs.3.rs-11103134/v1","is_oa":true,"landing_page_url":"https://doi.org/10.21203/rs.3.rs-11103134/v1","pdf_url":"https://www.researchsquare.com/article/rs-11103134/latest.pdf","source":{"id":"https://openalex.org/S4306525896","display_name":"Research Square","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Research Square","raw_type":"posted-content"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.504800021648407,"id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W7224675349.pdf","grobid_xml":"https://content.openalex.org/works/W7224675349.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W2032705522","https://openalex.org/W2483856419","https://openalex.org/W2512577309","https://openalex.org/W2586669868","https://openalex.org/W2761950549","https://openalex.org/W2774632254","https://openalex.org/W2970114831","https://openalex.org/W2989547448","https://openalex.org/W2999539828","https://openalex.org/W3111786871","https://openalex.org/W3117305349","https://openalex.org/W4387729031","https://openalex.org/W4388725854","https://openalex.org/W4392342694","https://openalex.org/W4406086706","https://openalex.org/W4407929056","https://openalex.org/W4410641146","https://openalex.org/W4412933410","https://openalex.org/W4415673399"],"related_works":["https://openalex.org/W2614789182","https://openalex.org/W7161958232","https://openalex.org/W4382788525","https://openalex.org/W4394726457","https://openalex.org/W1969957482","https://openalex.org/W4393865954","https://openalex.org/W7212117638","https://openalex.org/W2030684996","https://openalex.org/W3048160043","https://openalex.org/W7046300983"],"abstract_inverted_index":{"Abstract":[0],"Antibiotic":[1],"resistance,":[2],"a":[3,47,63,76,139,148,190,211,218],"natural":[4],"feature":[5],"of":[6,36,42,175,210,227,231,241,244,251],"bacterial":[7],"evolution,":[8],"is":[9],"not":[10],"confined":[11],"to":[12,53,61,88,100],"clinical":[13],"settings":[14],"but":[15],"actively":[16],"circulates":[17],"across":[18],"aquatic":[19],"and":[20,25,27,39,87,93,106,119,133,162,237],"terrestrial":[21],"ecosystems,":[22],"food":[23,43],"chains,":[24],"animal":[26],"human":[28,51],"populations.":[29],"Aquatic":[30],"ecosystems":[31],"serve":[32],"both":[33],"as":[34,40],"reservoirs":[35],"resistance":[37,56,253],"determinants":[38],"sources":[41],"production,":[44],"making":[45],"seafood":[46],"critical":[48],"interface":[49],"for":[50,247],"exposure":[52],"environmentally":[54],"derived":[55],"genes.":[57],"This":[58],"study":[59],"aimed":[60],"characterize":[62],"novel":[64,124,140,212],"chromosomally":[65,187],"encoded":[66],"OXA-12-like":[67,151,221],"\u03b2-lactamase":[68,152,222],"variant":[69,127,223],"(":[70],"bla":[71,125,184],"OXA\u22121433":[72,126,185],")":[73],"identified":[74,147],"in":[75,234],"new":[77],"Aeromonas":[78],"veronii":[79,214],"sequence":[80,114,132,141,215],"type":[81,142,216],"(ST3591)":[82],"isolated":[83],"from":[84],"ready-to-eat":[85],"oysters,":[86],"investigate":[89],"its":[90],"genetic,":[91],"structural,":[92],"phenotypic":[94,134],"features.":[95],"The":[96,123,208],"isolate":[97],"was":[98,128,186],"subjected":[99],"hybrid":[101],"whole-genome":[102],"sequencing":[103],"using":[104],"short-":[105],"long-read":[107],"technologies,":[108],"followed":[109],"by":[110,164],"genome":[111,145],"assembly,":[112],"multilocus":[113],"typing,":[115],"genomic":[116,192,242],"context":[117,180],"characterization,":[118],"antimicrobial":[120],"susceptibility":[121],"testing.":[122],"further":[129],"characterized":[130],"through":[131],"analyses.":[135],"MLST":[136],"analysis":[137,181],"revealed":[138],"(ST3591),":[143],"while":[144,169],"mining":[146],"previously":[149,219],"undescribed":[150,220],"variant.":[153],"OXA-1433":[154],"shared":[155],"95.08%":[156],"amino":[157,166],"acid":[158,167],"identity":[159],"with":[160,205],"OXA-12":[161],"differed":[163],"13":[165],"substitutions":[168],"retaining":[170],"the":[171,228,239,249],"conserved":[172,191],"motifs":[173],"characteristic":[174],"class":[176],"D":[177],"\u03b2-lactamases.":[178],"Genomic":[179],"demonstrated":[182,201],"that":[183],"located":[188],"within":[189],"region":[193],"lacking":[194],"detectable":[195],"mobile":[196],"genetic":[197,229],"elements.":[198],"Phenotypic":[199],"assays":[200],"imipenem":[202],"hydrolysis,":[203],"consistent":[204],"carbapenemase":[206],"activity.":[207],"identification":[209],"A.":[213],"carrying":[217],"expands":[224],"current":[225],"knowledge":[226],"diversity":[230],"this":[232],"species":[233],"food-associated":[235],"environments":[236],"highlights":[238],"value":[240],"surveillance":[243],"seafood-associated":[245],"bacteria":[246],"monitoring":[248],"evolution":[250],"antibiotic":[252],"determinants.":[254]},"counts_by_year":[],"updated_date":"2026-10-31T12:09:11.096373","created_date":"2026-10-30T00:00:00"}
