{"id":"https://openalex.org/W7223574584","doi":"https://doi.org/10.3390/pathogens15111113","title":"Laboratory Diagnosis of Staphylococcus spp. Infections","display_name":"Laboratory Diagnosis of Staphylococcus spp. Infections","publication_year":2026,"publication_date":"2026-10-25","ids":{"openalex":"https://openalex.org/W7223574584","doi":"https://doi.org/10.3390/pathogens15111113"},"language":"en","primary_location":{"id":"doi:10.3390/pathogens15111113","doi":"https://doi.org/10.3390/pathogens15111113","is_oa":true,"landing_page_url":"https://doi.org/10.3390/pathogens15111113","pdf_url":null,"source":{"id":"https://openalex.org/S4210239906","display_name":"Pathogens","issn_l":"2076-0817","issn":["2076-0817"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pathogens","raw_type":"journal-article"},"volume":null,"type":"article","is_traditional":true,"indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.3390/pathogens15111113","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016358444","display_name":"Elisabete Machado","orcid":"https://orcid.org/0000-0002-2460-6504","observed_orcids":["https://orcid.org/0000-0002-2460-6504"]},"institutions":[{"id":"https://openalex.org/I157071867","display_name":"Fernando Pessoa University","ror":"https://ror.org/04h8e7606","country_code":"PT","type":"education","lineage":["https://openalex.org/I157071867"]},{"id":"https://openalex.org/I182534213","display_name":"Universidade do Porto","ror":"https://ror.org/043pwc612","country_code":"PT","type":"education","lineage":["https://openalex.org/I182534213"]},{"id":"https://openalex.org/I4210138594","display_name":"Rede de Qu\u00edmica e Tecnologia","ror":"https://ror.org/04j14t006","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I4210138594"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Elisabete Machado","raw_affiliation_strings":["Faculty of Health Sciences, Fernando Pessoa University, 4200-150 Porto, Portugal","RISE-Health, Faculty of Health Sciences, Fernando Pessoa University, 4200-150 Porto, Portugal","UCIBIO-Applied Molecular Biosciences Unit, Laboratory of Microbiology, Department of Biological Sciences, REQUIMTE, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal"],"raw_orcid":"https://orcid.org/0000-0002-2460-6504","affiliations":[{"raw_affiliation_string":"Faculty of Health Sciences, Fernando Pessoa University, 4200-150 Porto, Portugal","institution_ids":["https://openalex.org/I157071867"]},{"raw_affiliation_string":"RISE-Health, Faculty of Health Sciences, Fernando Pessoa University, 4200-150 Porto, Portugal","institution_ids":["https://openalex.org/I157071867"]},{"raw_affiliation_string":"UCIBIO-Applied Molecular Biosciences Unit, Laboratory of Microbiology, Department of Biological Sciences, REQUIMTE, Faculty of Pharmacy, University of Porto, 4050-313 Porto, Portugal","institution_ids":["https://openalex.org/I182534213","https://openalex.org/I4210138594"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5016358444"],"corresponding_institution_ids":["https://openalex.org/I157071867","https://openalex.org/I182534213","https://openalex.org/I4210138594"],"apc_list":{"value":2200,"currency":"CHF","value_usd":2654},"apc_paid":{"value":2200,"currency":"CHF","value_usd":2654},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.76441427,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"15","issue":"11","first_page":"1113","last_page":"1113"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9526000022888184,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12167","display_name":"Bacterial Identification and Susceptibility Testing","score":0.9526000022888184,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10195","display_name":"Antimicrobial Resistance in Staphylococcus","score":0.04699999839067459,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12824","display_name":"Infections and bacterial resistance","score":9.999999747378752e-05,"subfield":{"id":"https://openalex.org/subfields/2726","display_name":"Microbiology (medical)"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/staphylococcal-infections","display_name":"staphylococcal infections","score":0.9449999928474426},{"id":"https://openalex.org/keywords/staphylococcus-aureus","display_name":"Staphylococcus aureus","score":0.9879999756813049},{"id":"https://openalex.org/keywords/coagulase-negative-staphylococci","display_name":"coagulase-negative staphylococci","score":0.9679999947547913},{"id":"https://openalex.org/keywords/staphylococcus-saprophyticus","display_name":"Staphylococcus saprophyticus","score":0.9580000042915344},{"id":"https://openalex.org/keywords/staphylococcus-epidermidis","display_name":"Staphylococcus epidermidis","score":0.9829999804496765},{"id":"https://openalex.org/keywords/staphylococcus-haemolyticus","display_name":"Staphylococcus haemolyticus","score":0.921999990940094},{"id":"https://openalex.org/keywords/staphylococcus-lugdunensis","display_name":"Staphylococcus lugdunensis","score":0.9940000176429749},{"id":"https://openalex.org/keywords/bacterial-identification","display_name":"bacterial identification","score":0.7639999985694885},{"id":"https://openalex.org/keywords/phenotypic-identification","display_name":"phenotypic identification","score":0.8270000219345093},{"id":"https://openalex.org/keywords/biochemical-tests","display_name":"biochemical tests","score":0.9419999718666077},{"id":"https://openalex.org/keywords/automated-identification-system","display_name":"automated identification systems","score":0.843999981880188},{"id":"https://openalex.org/keywords/molecular-identification","display_name":"molecular identification","score":0.7710000276565552},{"id":"https://openalex.org/keywords/clinical-microbiology","display_name":"clinical microbiology","score":0.7829999923706055}],"concepts":[{"id":"https://openalex.org/C2776580751","wikidata":"https://www.wikidata.org/wiki/Q1708986","display_name":"Staphylococcus saprophyticus","level":5,"score":0.6894000172615051},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6819999814033508},{"id":"https://openalex.org/C2779288629","wikidata":"https://www.wikidata.org/wiki/Q199695","display_name":"Staphylococcus","level":4,"score":0.5087000131607056},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4627000093460083},{"id":"https://openalex.org/C2777334864","wikidata":"https://www.wikidata.org/wiki/Q34879","display_name":"Staphylococcal infections","level":4,"score":0.44839999079704285},{"id":"https://openalex.org/C2779489039","wikidata":"https://www.wikidata.org/wiki/Q188121","display_name":"Staphylococcus aureus","level":3,"score":0.424699991941452},{"id":"https://openalex.org/C2992965680","wikidata":"https://www.wikidata.org/wiki/Q598976","display_name":"Clinical microbiology","level":2,"score":0.3984000086784363},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3603000044822693},{"id":"https://openalex.org/C2780945871","wikidata":"https://www.wikidata.org/wiki/Q194274","display_name":"Backup","level":2,"score":0.3564999997615814},{"id":"https://openalex.org/C2777949923","wikidata":"https://www.wikidata.org/wiki/Q131915","display_name":"Staphylococcus epidermidis","level":4,"score":0.3515999913215637},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3353999853134155},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.2971000075340271},{"id":"https://openalex.org/C177713679","wikidata":"https://www.wikidata.org/wiki/Q679690","display_name":"Intensive care medicine","level":1,"score":0.28679999709129333},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2565999925136566},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.25119999051094055}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.3390/pathogens15111113","doi":"https://doi.org/10.3390/pathogens15111113","is_oa":true,"landing_page_url":"https://doi.org/10.3390/pathogens15111113","pdf_url":null,"source":{"id":"https://openalex.org/S4210239906","display_name":"Pathogens","issn_l":"2076-0817","issn":["2076-0817"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pathogens","raw_type":"journal-article"}],"best_oa_location":{"id":"doi:10.3390/pathogens15111113","doi":"https://doi.org/10.3390/pathogens15111113","is_oa":true,"landing_page_url":"https://doi.org/10.3390/pathogens15111113","pdf_url":null,"source":{"id":"https://openalex.org/S4210239906","display_name":"Pathogens","issn_l":"2076-0817","issn":["2076-0817"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","medline","norway-1","poland-100","russia-white-list-2","vabb-shw"],"host_organization":"https://openalex.org/P4310310987","host_organization_name":"Multidisciplinary Digital Publishing Institute","host_organization_lineage":["https://openalex.org/P4310310987"],"host_organization_lineage_names":["Multidisciplinary Digital Publishing Institute"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Pathogens","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6240000128746033,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"study_designs":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":15,"referenced_works":["https://openalex.org/W1998164621","https://openalex.org/W2098806631","https://openalex.org/W2116149718","https://openalex.org/W2120486191","https://openalex.org/W2148394870","https://openalex.org/W2284974270","https://openalex.org/W2620748783","https://openalex.org/W2922530610","https://openalex.org/W3189271895","https://openalex.org/W4285097563","https://openalex.org/W4392935370","https://openalex.org/W4411028335","https://openalex.org/W7119480117","https://openalex.org/W7128476788","https://openalex.org/W7163571059"],"related_works":["https://openalex.org/W3209741738","https://openalex.org/W1872649016","https://openalex.org/W7135901658","https://openalex.org/W2802916684","https://openalex.org/W2409229822","https://openalex.org/W2986119669","https://openalex.org/W2403669374","https://openalex.org/W2099465753","https://openalex.org/W2951982828","https://openalex.org/W7097181832"],"abstract_inverted_index":{"Staphylococcus":[0,28,56,77],"spp.":[1,29,57],"are":[2,49,113,132],"among":[3],"the":[4,19,52,83,149,178,186],"most":[5,20],"common":[6],"human":[7],"pathogens":[8],"identified":[9],"from":[10,79],"clinical":[11,80],"samples":[12],"in":[13,185],"microbiology":[14],"laboratories.":[15],"S.":[16,33,40,42,45],"aureus":[17],"is":[18,64,155],"clinically":[21],"relevant":[22],"species,":[23],"followed":[24],"by":[25,142],"some":[26],"coagulase-negative":[27],"(CoNS)":[30],"such":[31],"as":[32,116,135,164,173],"saprophyticus":[34],"and,":[35],"to":[36,65,75,97,140,190],"a":[37,67],"lesser":[38],"extent,":[39],"epidermidis,":[41],"haemolyticus,":[43],"and":[44,72,92,108,130,193],"lugdunensis.":[46],"Different":[47],"methods":[48,128,166],"available":[50],"for":[51,70,89,95],"laboratory":[53,73],"diagnosis":[54],"of":[55,61,123,151],"infections.":[58],"The":[59],"aim":[60],"this":[62],"tutorial":[63],"provide":[66],"practical":[68],"approach":[69],"students":[71],"technicians":[74,184],"identify":[76],"species":[78],"samples,":[81],"guiding":[82],"step-by-step":[84],"execution":[85],"using":[86],"abbreviated":[87],"algorithms":[88],"phenotypic":[90,110,146,165],"identification":[91,111,141,175],"presenting":[93],"guidance":[94],"when":[96,177],"perform":[98],"additional":[99],"miscellaneous":[100],"tests":[101,162],"or":[102,137,144],"pursue":[103],"other":[104],"microorganisms.":[105],"Commercial":[106],"semi-automated":[107],"automated":[109,145],"systems":[112],"also":[114],"addressed,":[115],"they":[117,158],"can":[118],"speed":[119],"up":[120],"identification,":[121],"particularly":[122],"CoNS":[124],"species.":[125],"Finally,":[126],"molecular":[127,152],"(proteotypic":[129],"genotypic)":[131],"briefly":[133],"discussed":[134],"alternative":[136],"complementary":[138],"approaches":[139],"conventional":[143],"methods.":[147,200],"Despite":[148],"advantages":[150],"methods,":[153],"it":[154],"highly":[156],"unlikely":[157],"will":[159,171],"replace":[160],"biochemical":[161,168],"entirely,":[163],"(mainly":[167],"test-based":[169],"methods)":[170],"remain":[172],"backup":[174],"strategies":[176],"latest":[179],"technology":[180],"fails.":[181],"Therefore,":[182],"future":[183],"field":[187],"still":[188],"have":[189],"be":[191],"taught":[192],"gain":[194],"experience":[195],"with":[196],"these":[197],"older,":[198],"valuable":[199]},"counts_by_year":[],"updated_date":"2026-10-27T15:51:10.671819","created_date":"2026-10-26T00:00:00"}
