{"id":"https://openalex.org/W7223154190","doi":"https://doi.org/10.1128/mbio.02360-26","title":"Competition-dominated microbial interactions and adaptive mutations enhance synthetic denitrifying community functions","display_name":"Competition-dominated microbial interactions and adaptive mutations enhance synthetic denitrifying community functions","publication_year":2026,"publication_date":"2026-10-21","ids":{"openalex":"https://openalex.org/W7223154190","doi":"https://doi.org/10.1128/mbio.02360-26","pmid":"https://pubmed.ncbi.nlm.nih.gov/42904657"},"language":"en","primary_location":{"id":"doi:10.1128/mbio.02360-26","doi":"https://doi.org/10.1128/mbio.02360-26","is_oa":true,"landing_page_url":"https://doi.org/10.1128/mbio.02360-26","pdf_url":null,"source":{"id":"https://openalex.org/S4210201176","display_name":"mBio","issn_l":"2150-7511","issn":["2150-7511","2161-2129"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"mBio","raw_type":"journal-article"},"volume":null,"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1128/mbio.02360-26","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059432552","display_name":"Zhenrui Zhao","orcid":"https://orcid.org/0000-0003-1510-9263","observed_orcids":["https://orcid.org/0000-0003-1510-9263"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenrui Zhao","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":"https://orcid.org/0000-0003-1510-9263","affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083546197","display_name":"Ruiwen Hu","orcid":"https://orcid.org/0009-0007-1039-6490","observed_orcids":["https://orcid.org/0009-0007-1039-6490"]},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ruiwen Hu","raw_affiliation_strings":["Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory"],"raw_orcid":"https://orcid.org/0009-0007-1039-6490","affiliations":[{"raw_affiliation_string":"Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100579660","display_name":"Min Zhou","orcid":"https://orcid.org/0000-0002-9556-1526","observed_orcids":["https://orcid.org/0000-0002-9556-1526"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Zhou","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085676577","display_name":"Xiaotong Guan","orcid":"https://orcid.org/0009-0005-9287-6820","observed_orcids":["https://orcid.org/0009-0005-9287-6820"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaotong Guan","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043266673","display_name":"Huaxia Huang","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huaxia Huang","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5159208904","display_name":"Lang Ding","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lang Ding","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101973620","display_name":"Lu Qian","orcid":"https://orcid.org/0000-0001-6922-1125","observed_orcids":["https://orcid.org/0000-0001-6922-1125"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lu Qian","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005398573","display_name":"Yu-Zhen Ming","orcid":"https://orcid.org/0000-0003-2330-5117","observed_orcids":["https://orcid.org/0000-0003-2330-5117"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuzhen Ming","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":"https://orcid.org/0000-0003-2330-5117","affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064980260","display_name":"Mingyang Niu","orcid":"https://orcid.org/0000-0002-4117-6032","observed_orcids":["https://orcid.org/0000-0002-4117-6032"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Mingyang Niu","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5143824939","display_name":"Kun Wu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Kun Wu","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5159212407","display_name":"Xiaoli Yu","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoli Yu","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074241199","display_name":"Qingyun Yan","orcid":"https://orcid.org/0000-0003-0053-892X","observed_orcids":["https://orcid.org/0000-0003-0053-892X"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qingyun Yan","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070188363","display_name":"Longfei Shu","orcid":"https://orcid.org/0000-0001-9683-906X","observed_orcids":["https://orcid.org/0000-0001-9683-906X"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Longfei Shu","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":"https://orcid.org/0000-0001-9683-906X","affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5159202177","display_name":"Qiang He","orcid":null,"observed_orcids":[]},"institutions":[{"id":"https://openalex.org/I75027704","display_name":"University of Tennessee at Knoxville","ror":"https://ror.org/020f3ap87","country_code":"US","type":"education","lineage":["https://openalex.org/I75027704"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qiang He","raw_affiliation_strings":["Department of Civil and Environmental Engineering, University of Tennessee"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Civil and Environmental Engineering, University of Tennessee","institution_ids":["https://openalex.org/I75027704"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061973931","display_name":"Zhili He","orcid":"https://orcid.org/0000-0001-8225-7333","observed_orcids":["https://orcid.org/0000-0001-8225-7333"]},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4391012567","display_name":"Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai)","ror":"https://ror.org/03swgqh13","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4391012567"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhili He","raw_affiliation_strings":["School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University"],"raw_orcid":"https://orcid.org/0000-0001-8225-7333","affiliations":[{"raw_affiliation_string":"School of Marine Sciences, Marine Synthetic Ecology Research Center, Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), the China-ASEAN Belt and Road Joint Laboratory on Mariculture Technology, School of Environmental Science and Engineering, Sun Yat-sen University","institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4391012567"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3900,"currency":"USD","value_usd":3900},"apc_paid":{"value":3900,"currency":"USD","value_usd":3900},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.83861852,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"e0236026","last_page":"e0236026"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.7304999828338623,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.7304999828338623,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10564","display_name":"Wastewater Treatment and Nitrogen Removal","score":0.20149999856948853,"subfield":{"id":"https://openalex.org/subfields/2310","display_name":"Pollution"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.04280000180006027,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interspecific-competition","display_name":"interspecific competition","score":0.8489999771118164},{"id":"https://openalex.org/keywords/adaptive-mutations","display_name":"adaptive mutation","score":0.7950000166893005},{"id":"https://openalex.org/keywords/synthetic-microbial-communities","display_name":"synthetic microbial communities","score":0.9079999923706055},{"id":"https://openalex.org/keywords/denitrification","display_name":"denitrification","score":0.9789999723434448},{"id":"https://openalex.org/keywords/species-richness","display_name":"species richness","score":0.7680000066757202},{"id":"https://openalex.org/keywords/red-queen-hypothesis","display_name":"Red Queen hypothesis","score":0.8939999938011169},{"id":"https://openalex.org/keywords/eco-evolutionary-dynamics","display_name":"eco-evolutionary dynamics","score":0.9789999723434448},{"id":"https://openalex.org/keywords/nitrogen-removal","display_name":"nitrogen removal","score":0.6159999966621399},{"id":"https://openalex.org/keywords/host-fitness","display_name":"host fitness","score":0.5130000114440918},{"id":"https://openalex.org/keywords/dna-repair-genes","display_name":"DNA repair genes","score":0.8399999737739563},{"id":"https://openalex.org/keywords/secretion-systems","display_name":"secretion systems","score":0.6690000295639038},{"id":"https://openalex.org/keywords/experimental-evolution","display_name":"experimental evolution","score":0.3840000033378601}],"concepts":[{"id":"https://openalex.org/C63644423","wikidata":"https://www.wikidata.org/wiki/Q338562","display_name":"Interspecific competition","level":2,"score":0.7544000148773193},{"id":"https://openalex.org/C197011783","wikidata":"https://www.wikidata.org/wiki/Q5257859","display_name":"Denitrifying bacteria","level":4,"score":0.7267000079154968},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7139999866485596},{"id":"https://openalex.org/C110872660","wikidata":"https://www.wikidata.org/wiki/Q37813","display_name":"Ecosystem","level":2,"score":0.545199990272522},{"id":"https://openalex.org/C53565203","wikidata":"https://www.wikidata.org/wiki/Q17146659","display_name":"Species richness","level":2,"score":0.527999997138977},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.5235000252723694},{"id":"https://openalex.org/C87590526","wikidata":"https://www.wikidata.org/wiki/Q3592884","display_name":"Experimental evolution","level":3,"score":0.47279998660087585},{"id":"https://openalex.org/C91306197","wikidata":"https://www.wikidata.org/wiki/Q45767","display_name":"Competition (biology)","level":2,"score":0.44769999384880066},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.42100000381469727},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4066999852657318},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.39899998903274536},{"id":"https://openalex.org/C81407943","wikidata":"https://www.wikidata.org/wiki/Q17149178","display_name":"Microbial population biology","level":3,"score":0.3855000138282776},{"id":"https://openalex.org/C186795189","wikidata":"https://www.wikidata.org/wiki/Q3631109","display_name":"Environmental biotechnology","level":4,"score":0.3758000135421753},{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.3612000048160553},{"id":"https://openalex.org/C73593433","wikidata":"https://www.wikidata.org/wiki/Q742637","display_name":"Denitrification","level":3,"score":0.3479999899864197},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.335999995470047},{"id":"https://openalex.org/C133079900","wikidata":"https://www.wikidata.org/wiki/Q5155065","display_name":"Community structure","level":2,"score":0.3312999904155731},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.3294000029563904},{"id":"https://openalex.org/C130217890","wikidata":"https://www.wikidata.org/wiki/Q47041","display_name":"Biodiversity","level":2,"score":0.31839999556541443},{"id":"https://openalex.org/C135811302","wikidata":"https://www.wikidata.org/wiki/Q1382557","display_name":"Evolutionary ecology","level":3,"score":0.31439998745918274},{"id":"https://openalex.org/C153991713","wikidata":"https://www.wikidata.org/wiki/Q17142856","display_name":"Niche","level":2,"score":0.31279999017715454},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.29829999804496765},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28999999165534973},{"id":"https://openalex.org/C62142553","wikidata":"https://www.wikidata.org/wiki/Q200312","display_name":"Convergent evolution","level":4,"score":0.2680000066757202},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.2563999891281128},{"id":"https://openalex.org/C4590074","wikidata":"https://www.wikidata.org/wiki/Q5608096","display_name":"Community","level":3,"score":0.2524999976158142}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1128/mbio.02360-26","doi":"https://doi.org/10.1128/mbio.02360-26","is_oa":true,"landing_page_url":"https://doi.org/10.1128/mbio.02360-26","pdf_url":null,"source":{"id":"https://openalex.org/S4210201176","display_name":"mBio","issn_l":"2150-7511","issn":["2150-7511","2161-2129"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"mBio","raw_type":"journal-article"},{"id":"pmid:42904657","doi":null,"is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42904657","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"listed_in":[],"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"mBio","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1128/mbio.02360-26","doi":"https://doi.org/10.1128/mbio.02360-26","is_oa":true,"landing_page_url":"https://doi.org/10.1128/mbio.02360-26","pdf_url":null,"source":{"id":"https://openalex.org/S4210201176","display_name":"mBio","issn_l":"2150-7511","issn":["2150-7511","2161-2129"],"is_oa":true,"is_in_doaj":true,"is_core":true,"listed_in":["cwts-core","doaj","dongbi-b","doyens","jufo-2","ki-jl-2","medline","norway-2","oarl","poland-140","russia-white-list-1","vabb-shw"],"host_organization":"https://openalex.org/P4310320263","host_organization_name":"American Society for Microbiology","host_organization_lineage":["https://openalex.org/P4310320263"],"host_organization_lineage_names":["American Society for Microbiology"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"mBio","raw_type":"journal-article"},"sustainable_development_goals":[],"study_designs":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320337111","display_name":"Basic and Applied Basic Research Foundation of Guangdong Province","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":104,"referenced_works":["https://openalex.org/W822170887","https://openalex.org/W1573738255","https://openalex.org/W1582312374","https://openalex.org/W1592400292","https://openalex.org/W1594032928","https://openalex.org/W1975765538","https://openalex.org/W1979960007","https://openalex.org/W1990307469","https://openalex.org/W1991529393","https://openalex.org/W1991708537","https://openalex.org/W1996460711","https://openalex.org/W2002133791","https://openalex.org/W2007293968","https://openalex.org/W2010355651","https://openalex.org/W2017925150","https://openalex.org/W2018459257","https://openalex.org/W2035761714","https://openalex.org/W2040539560","https://openalex.org/W2042023734","https://openalex.org/W2042584521","https://openalex.org/W2046194150","https://openalex.org/W2055595349","https://openalex.org/W2065664854","https://openalex.org/W2066795675","https://openalex.org/W2070983897","https://openalex.org/W2073391911","https://openalex.org/W2087561878","https://openalex.org/W2088837665","https://openalex.org/W2091545272","https://openalex.org/W2097662881","https://openalex.org/W2104193931","https://openalex.org/W2106578986","https://openalex.org/W2111806697","https://openalex.org/W2116165854","https://openalex.org/W2116686857","https://openalex.org/W2131968937","https://openalex.org/W2134351926","https://openalex.org/W2146561745","https://openalex.org/W2166516091","https://openalex.org/W2170551349","https://openalex.org/W2207500777","https://openalex.org/W2274801375","https://openalex.org/W2463065306","https://openalex.org/W2510136745","https://openalex.org/W2619798870","https://openalex.org/W2734716512","https://openalex.org/W2753632495","https://openalex.org/W2757171664","https://openalex.org/W2763501459","https://openalex.org/W2765922336","https://openalex.org/W2786671949","https://openalex.org/W2794918530","https://openalex.org/W2797101767","https://openalex.org/W2888868845","https://openalex.org/W2895252122","https://openalex.org/W2897355487","https://openalex.org/W2901044882","https://openalex.org/W2936472896","https://openalex.org/W2954847673","https://openalex.org/W2977332526","https://openalex.org/W2981774387","https://openalex.org/W2994461127","https://openalex.org/W2997493903","https://openalex.org/W3004085469","https://openalex.org/W3004587631","https://openalex.org/W3005916987","https://openalex.org/W3048848030","https://openalex.org/W3087176413","https://openalex.org/W3092620526","https://openalex.org/W3092621662","https://openalex.org/W3094052059","https://openalex.org/W3133522510","https://openalex.org/W3160857064","https://openalex.org/W3161806622","https://openalex.org/W3177828909","https://openalex.org/W3188261165","https://openalex.org/W3199807000","https://openalex.org/W3217077580","https://openalex.org/W4206972777","https://openalex.org/W4225854602","https://openalex.org/W4286715756","https://openalex.org/W4293152770","https://openalex.org/W4309722382","https://openalex.org/W4311462821","https://openalex.org/W4313408982","https://openalex.org/W4315643177","https://openalex.org/W4320914118","https://openalex.org/W4365814028","https://openalex.org/W4375954733","https://openalex.org/W4376868957","https://openalex.org/W4385429243","https://openalex.org/W4387731332","https://openalex.org/W4393262024","https://openalex.org/W4393995158","https://openalex.org/W4400810449","https://openalex.org/W4401813009","https://openalex.org/W4402005158","https://openalex.org/W4402298623","https://openalex.org/W4402534763","https://openalex.org/W4403406771","https://openalex.org/W4403921003","https://openalex.org/W4404119634","https://openalex.org/W4413812527","https://openalex.org/W7133517058"],"related_works":["https://openalex.org/W4375954733","https://openalex.org/W4404134483","https://openalex.org/W4386224595","https://openalex.org/W4415071255","https://openalex.org/W4205313053","https://openalex.org/W7052395244","https://openalex.org/W3100080396","https://openalex.org/W4387849106","https://openalex.org/W2951952227","https://openalex.org/W3012826299"],"abstract_inverted_index":{"ABSTRACT":[0],"Understanding":[1],"how":[2,28,200],"interspecific":[3,137,225],"interactions":[4,30,58,202],"shape":[5,203],"ecosystem":[6,197,204,302],"functioning":[7],"is":[8,189],"a":[9,43,193],"fundamental":[10],"and":[11,31,49,61,78,87,102,111,127,169,179,231,256,263,301],"longstanding":[12],"question":[13],"in":[14,37,70,97,183,248],"ecology,":[15],"especially":[16],"along":[17,42],"an":[18],"evolutionary":[19,207,236],"trajectory.":[20],"Here,":[21],"we":[22,222],"used":[23],"experimental":[24,75,270],"evolution":[25],"to":[26],"evaluate":[27],"microbial":[29,57,165,261,273,297],"adaptive":[32,140,167,229,245,299],"mutations":[33,89,121,230],"shaped":[34],"community-level":[35,144,233],"functions":[36,205],"synthetic":[38,213],"denitrifying":[39,214],"communities":[40,215],"(SDCs)":[41],"species":[44,163,201,220,241,295],"richness":[45,242],"gradient":[46],"(one,":[47],"two,":[48],"six":[50],"species).":[51],"Our":[52,266],"results":[53],"showed":[54],"that":[55,118,136,224,272],"competitive":[56],"were":[59],"observed":[60],"significantly":[62],"(":[63],"P":[64],"<":[65],"0.05)":[66],"enhanced":[67],"denitrification":[68,234,264],"rates":[69],"the":[71,83,91,119,281,291],"six-species":[72,92],"SDCs":[73],"during":[74],"evolution.":[76],"Genome":[77],"metagenome":[79],"re-sequencing":[80],"analysis":[81],"revealed":[82,135],"highest":[84],"fixed":[85,120],"non-synonymous":[86],"frameshift":[88],"within":[90],"SDCs,":[93],"among":[94],"genes":[95,249],"involved":[96],"nutrient":[98,252],"transport,":[99,253],"DNA":[100,254],"repair,":[101,255],"secretion":[103,257],"pathways.":[104],"AlphaFold2":[105],"protein":[106],"structure":[107],"prediction,":[108],"molecular":[109],"docking,":[110],"Evo":[112],"2":[113],"host":[114,124],"fitness":[115,262],"prediction":[116],"indicated":[117],"could":[122],"improve":[123],"strain":[125],"fitness,":[126],"partial":[128],"least":[129],"squares":[130],"path":[131],"modeling":[132],"(PLS-PM)":[133],"further":[134],"competition":[138,226,274],"accelerated":[139],"mutations,":[141,168,246],"thereby":[142],"reinforcing":[143],"functions,":[145,171],"indicating":[146],"potential":[147],"Red":[148,282],"Queen":[149,283],"dynamics.":[150],"This":[151,285],"study":[152,286],"offers":[153],"novel":[154],"insights":[155],"into":[156],"our":[157,288],"understanding":[158,289],"of":[159,196,219,290],"eco-evolutionary":[160,292],"mechanisms":[161,293],"linking":[162,294],"richness,":[164,221,296],"interactions,":[166,298],"community":[170],"with":[172,216,239,251,280],"important":[173],"implications":[174],"for":[175],"active":[176],"nitrogen":[177],"removal":[178],"greenhouse":[180],"gas":[181],"mitigation":[182],"diverse":[184],"ecosystems.":[185],"IMPORTANCE":[186],"Microbial":[187],"diversity":[188],"widely":[190],"recognized":[191],"as":[192],"key":[194],"driver":[195],"functioning,":[198],"yet":[199],"through":[206],"processes":[208],"remains":[209],"poorly":[210],"understood.":[211],"Using":[212],"different":[217],"levels":[218],"show":[223],"can":[227,275],"accelerate":[228],"enhance":[232],"over":[235],"timescales.":[237],"Communities":[238],"higher":[240],"accumulated":[243],"more":[244],"particularly":[247],"associated":[250],"systems,":[258],"ultimately":[259],"improving":[260],"performance.":[265],"findings":[267],"provide":[268],"direct":[269],"evidence":[271],"promote":[276],"functional":[277],"adaptation,":[278],"consistent":[279],"hypothesis.":[284],"advances":[287],"evolution,":[300],"functioning.":[303]},"counts_by_year":[],"updated_date":"2026-10-26T11:51:55.731654","created_date":"2026-10-22T00:00:00"}
